Cucsa.106130 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGCGCTTCCCTTTTTTCAATTTTTCTCTCTTAATAAACAACTCTTCTTTTATTTAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTATCTCTCTGTTTCTCTCTTCACAATTTCACTTCCCAATCGCTGTGGACAAACCCACAGTCATAGTAGATTCTCAGGTCTGGCCGGACTACGCACCATAGCCGTTCGACTAGGCGGCACCGGCACCGGCGGATTTTGGTACTGGAGGAAAAAAAAGAGGCGGAACCGGAGTAAGACCAAAGTTAAGCATAGGTTTATGGAGCTTTGGCATAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCGCTGTTTCAGCTCGTGTCAGGGCTCGGAAAACTGGTAACTCTCTTCTTTACTCTTCCTCTTTATCCTTTTTTTCACTTCCAAGTTTTTCTCCCCTTTTCCGAATCGGTGTTTGATTATTGCTTTGTTTAATTTTTTTCGAATGTGATTCTATCTACTATACGAGATTACGAGTTGCTTCTGATTTGATGGAATCACTGTGTTTCTGTTTCTGTTATTATCTCTGGTTTCTGATTTTCTTTTTCTAACTGTGTGTGCTGCAATTTGAAGGAGAACTTGTGTGGAACATCATCTACAGTTAATTTCCTGCATAAGATCATGATATGTGATTGGAGGGAAGAGATTCTTGTTCTTGATTTGTCGTGAGAGGGAAATTGTAGAAGAAATTAGAAAAATATGAAAGGGTTCACATCCATTTAGGTTTTCAATACAAATTTCTTAGTCTTACTTTTTTTAATACTTTTCACCGACTTTGAATGTGTTATATAACACCTTGATCTATATGCAATGTTTATAAGGCACTTAATCTCAATTCCCAACCACTACGATTGAGAAAGAAAGAGAGAGAGTTGATTCTAGAAGGCAATAAATGGCATGTGATTATTCAACCTCTCTAGTACAATAATTTGGTAGGAAAAATCACAAGAATCCCATATACATACTCATACATACATCCATATACTCCAATTTCTCCCAAATATAGAGACATCAAATCCCTTTGAGAATTCTTAGTTTAAACTTTAAACTAGGAGAAATACAGAGACATCAAATCCCTTTGAGAATTCTTAGTTTAAACTTTAAACTAGAGTAAATTTTGTTTTCAGCTAAGATATTTATCTGTCATGAAGCTTTTCCCATTTGATAATTTACAAAAAGGACCCCACTGGTCATTGTTGTTGAAAGCCAAAAGATTAGAGCCCACTTTTATGAGATTAAAAGTTTTTTTTTATAACAGTTTAGATTGTCCTTATGATTCTTCATAGTCATAATCCCACTTAAATACTAACGGATGGCCACTAGTGCTCATTACTTTTTGAGTAGTGGTGACCCAATTTGATTTGTTTTTGCCTTTCAATTACTATTATAAAAGAGAAGGCCAAGAGGCGTGGCCTGCTATGGCCGTCTCTAGACTTTTATTATTCCTATAGTTCTGTCCAAGTCGCTTTCATTCACAATTTGACTAGCACCACAAATTTTCTCTACCGCATCTCAATGTTTGTGTTTAACATTGCATAGATTTTGGCTTAGGTATTTTTTACTTTTGTTTTGGTGCTTATAATTACAATATGTTCACTTCTTTGAAAATGTTTATTTTGGTTTGTTTACTTCTATAAGAGATTATCATTTTAGTCATTTCATTTTCATTTTTTAAGAGACCAAAATGGTTTTCTCTTCAAAGTTGTACCAAAATAAACCAAAAGTGGAATTACAAGGACCAAATTAACATTTTTGAAAAGTACAAAGATTGAAGTAAACAAAATCCAAAATAGAGGGAGAAAGAAAGTTGAAGTGAAATTGGAATGGAGTAGTTATAGTTACAATATGTTCATTTTGGTCAAGTTAGGTGTCCCTTTAGATGGGCTGGGCTCAAATCAAGCCCATGAAATTCTAAATTTGTTATGTGTGGTGTCCACCTAGATGATCTCTAACTACATGTAGTGTACTAATTCTTTCATTCATAAGAAAAATCCTCCTCAATTAGAAAGCTAAGCTAAAGCAATTGTGTGGATTTTTTCTACTAACAGGAGCTGGACTTCTGAAGCTTCATGATGATGTAGAAACATGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGCTACGTCGATCAGAGTCGGAGTTGGTCAGTCACCAACCGAAACGTAAACAGCGACCGTTTTGGAGAGTCTCCGTGTGGTCCAACCATGCTGCAGCAGCCTCTTCTTACACTGCAACTCATGCTTGAGCTCATCAAATGCAAACACACTGTTCAGCTCAGCTCAGCTTCAATTATGTGCCATCTCTTTGGTATCTTCAACTTTTTGTTTTAAGAAAAAAAGAAAAGAAACTAACAGCGCCAATGCTTGCAAGGCACATAACTTTTTACCAAACTTGTTCAAAGAAATGTGAAGTCTTTGGCAGTTCATCGCTTCCACTTTGAACAGAAAAAAACACACCCTTTTTGTAAGTAATAATAAAAATTTTGGTTTTGTAGCTTAAGAATTGTTCCGGGGTTG TGGCGCTTCCCTTTTTTCAATTTTTCTCTCTTAATAAACAACTCTTCTTTTATTTAAtcttcttcttcttcttcttcttcttcttcGTATCTCTCTGTTTCTCTCTTCACAATTTCACTTCCCAATCGCTGTGGACAAACCCACAGTCATAGTAGATTCTCAGGTCTGGCCGGACTACGCACCATAGCCGTTCGACTAGGCGGCACCGGCACCGGCGGATTTTGGTACTGGAGGAAAAAAAAGAGGCGGAACCGGAGTAAGACCAAAGTTAAGCATAGGTTTATGGAGCTTTGGCATAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCGCTGTTTCAGCTCGTGTCAGGGCTCGGAAAACTGGAGCTGGACTTCTGAAGCTTCATGATGATGTAGAAACATGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGCTACGTCGATCAGAGTCGGAGTTGGTCAGTCACCAACCGAAACGTAAACAGCGACCGTTTTGGAGAGTCTCCGTGTGGTCCAACCATGCTGCAGCAGCCTCTTCTTACACTGCAACTCATGCTTGAGCTCATCAAATGCAAACACACTGTTCAGCTCAGCTCAGCTTCAATTATGTGCCATCTCTTTGGTATCTTCAACTTTTTGTTTTAAGAAAAAAAGAAAAGAAACTAACAGCGCCAATGCTTGCAAGGCACATAACTTTTTACCAAACTTGTTCAAAGAAATGTGAAGTCTTTGGCAGTTCATCGCTTCCACTTTGAACAGAAAAAAACACACCCTTTTTGTAAGTAATAATAAAAATTTTGGTTTTGTAGCTTAAGAATTGTTCCGGGGTTG ATGGAGCTTTGGCATAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCGCTGTTTCAGCTCGTGTCAGGGCTCGGAAAACTGGAGCTGGACTTCTGAAGCTTCATGATGATGTAGAAACATGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGCTACGTCGATCAGAGTCGGAGTTGGTCAGTCACCAACCGAAACGTAAACAGCGACCGTTTTGGAGAGTCTCCGTGTGGTCCAACCATGCTGCAGCAGCCTCTTCTTACACTGCAACTCATGCTTGA MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA*
BLAST of Cucsa.106130 vs. TrEMBL
Match: A0A0A0K8I7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430780 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 2.0e-47 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Cucsa.106130 vs. TrEMBL
Match: A9PJ91_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 1.3e-35 Identity = 72/93 (77.42%), Postives = 85/93 (91.40%), Query Frame = 1
BLAST of Cucsa.106130 vs. TrEMBL
Match: A0A067E4H7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034519mg PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 2.5e-34 Identity = 68/92 (73.91%), Postives = 84/92 (91.30%), Query Frame = 1
BLAST of Cucsa.106130 vs. TrEMBL
Match: V4UND2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026849mg PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 2.5e-34 Identity = 68/92 (73.91%), Postives = 84/92 (91.30%), Query Frame = 1
BLAST of Cucsa.106130 vs. TrEMBL
Match: K4BLT5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 4.0e-32 Identity = 64/90 (71.11%), Postives = 79/90 (87.78%), Query Frame = 1
BLAST of Cucsa.106130 vs. TAIR10
Match: AT5G43150.1 (AT5G43150.1 unknown protein) HSP 1 Score: 62.8 bits (151), Expect = 1.3e-10 Identity = 28/77 (36.36%), Postives = 46/77 (59.74%), Query Frame = 1
BLAST of Cucsa.106130 vs. NCBI nr
Match: gi|700189961|gb|KGN45194.1| (hypothetical protein Csa_7G430780 [Cucumis sativus]) HSP 1 Score: 196.1 bits (497), Expect = 2.8e-47 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Cucsa.106130 vs. NCBI nr
Match: gi|118489278|gb|ABK96444.1| (unknown [Populus trichocarpa x Populus deltoides]) HSP 1 Score: 156.8 bits (395), Expect = 1.9e-35 Identity = 72/93 (77.42%), Postives = 85/93 (91.40%), Query Frame = 1
BLAST of Cucsa.106130 vs. NCBI nr
Match: gi|567870155|ref|XP_006427699.1| (hypothetical protein CICLE_v10026849mg [Citrus clementina]) HSP 1 Score: 152.5 bits (384), Expect = 3.6e-34 Identity = 68/92 (73.91%), Postives = 84/92 (91.30%), Query Frame = 1
BLAST of Cucsa.106130 vs. NCBI nr
Match: gi|568881138|ref|XP_006493446.1| (PREDICTED: uncharacterized protein LOC102619868 [Citrus sinensis]) HSP 1 Score: 150.2 bits (378), Expect = 1.8e-33 Identity = 67/92 (72.83%), Postives = 83/92 (90.22%), Query Frame = 1
BLAST of Cucsa.106130 vs. NCBI nr
Match: gi|970019969|ref|XP_015071194.1| (PREDICTED: uncharacterized protein LOC107015442 [Solanum pennellii]) HSP 1 Score: 143.7 bits (361), Expect = 1.7e-31 Identity = 63/90 (70.00%), Postives = 79/90 (87.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |