Carg18719 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTAACTATTTTTTAATCTTCCAATTCATTTCACTGTTGCTCTGTCTCTCTCTCTCTTGCTCTCTCTGCAATTTCATAAGTCTTCTGATCGCAATTTCACTACCGAAGAGCAGCGGAAGGACCGTGAGTGAAAGGAGTGCGGCAGGTCTGGCCGGGCTCAGCACCATAGCCGTTCGACTTGGCGGCGGCGGCGGCGGCGGATTTTGGTACCGGAGGAAAAAGAAGACACGGAGCAGGAGTAAGACGAAAGTTAAGCATCGGTTTATGGAGCTTTGGCACAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCACTGTTTCCGCTCGTGTTAGGGCTCGGAAGAGTGGTTAGTCTCTTAATACTCTTCCTCTTTCCACTTCCTTTTTACCTTCGATTTTTTTTCCCCTCCAAATCGGAGTTTGATTATGGCTTAATTTTATCGAATGTGATGATCTCGACTAAATGAATTGCTTCTGATTGATGGAATTTCTGTATTTCTGTTTCCATCAGGCTTCTCCGGTTTCGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTGAACTGTGTTCTGCCATTTGAACTTGACAGAAGAATTTGTTTGTAACATCATCTGCTCTTAATTTCTGCATAAGATTATGATATGTGATTTAAGAGAAGAGATTCTCGTTCTTGATTTTCCATGAGAGGAAAATTGTAAAAGAACTTCGAAAAATATGGGAGGAGCCACACCTAGTGAACCGGAAGGCGAAGATACGGTTTATAATACTAATTTCTTACTGTTTTTTTTTTTCCAATGCTTTTAACCGACTCGGAATTGGTTATATGATACCTTGATCTGTATGCAACAGTTATTAGGCACTTAAATCCAACCACTACGATAGACGGGGGGAGAGAGTCGATTCTAGATGGCAATAAATGGTCATGTGATTATTCAACCTCTATAGTACAATAATTTGGTAGGAAAAATCACAAGGGAACTCATAAGGATACGACCATGTACTCCCATTTCTCCTAAGTGATTCAAATTGGCCAAAAGTATCAACAAATATGGACATCAAAACCCTTTAATTTTAGAAGTGCTAGTTTTAATCGTGGGTCAAACATCTCCTTCGAATATAATTTTGTTTTTCAACCAAGATATTTATCCAATGAAGCTTTCCCCATTGAATAATGCACAAAAAGGTCCCCACTGGCAGTACAATTGAAGACAGAGTAAAAGATTAGAGCCACCTTTTAAGATTTAAATTTTGTTTTTACAACAGCTTTGATTGTCCCGTTGATTCTTCGTAGTCATAATTCCACTTAAAAGACTAATGACGGCCACCAGTGCCCATTACTTTTCGTCTAGTGGTGACCCAATTTGATTTGTTTTTGCCTCTATTACCATTATAAGCAGGAAGGCAAGAGGCGTGGCCTGGCCAATTGCCATCTCTAGACTTTTATTATTCTTATTCGTACTGTTCAAGCCCCTTTTATTGACAATATCACCACATATTTCCTCTACCCTCTCCAGTATTCCAGCCCAATATTTTTGTATAATATTGTATATATGTAGACAGAGGAGAGAGAAAGTCAGTCCTGTCTCTTTAGATGGGCTGGGCACAAATTAGGCCCATTAAATTCTGCATTTCTTGTATGGATGGCCCCCAAAGATCTCTTATTACATGAAGTACCAATTCTTTCATCTATAATAGTGCTCTTTATAGAAGGCTAAGCTAAAGCAAATATGTGGCTTTTGCTGCTGCAGGAGCTGGGCTTCTGAAGCTTCATGATGACGTAGAAACCTGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGCTGCGTCGATCAGAGTCGGAACTAGTCAGTCACCGACCGAAGCGCAAGCTGCGGCCGTTTTGGAGAGTCTCTGTGTGGTCCAACCATGCTGCTGCAGCCTCCTCTTACACTGCAACTCATGCGTGAGGCCATCAAACCAACACTCAGCTTCGTCAATTCTGCGCCATCTCTTTGGTATCTTCACCGTTTTTTCAGAACTAACAGCCAATGCTTGCAATGGTACGGAACTTTTTACCAAACTTGTTCAAAGAAATGTGAAGTCTTTGCACACGCAGTCCATCTCTTCCACTTTGAGCAGACAAACACCCTTTTGTAAATAATAATAAAATTTTGTGTTCGTAGCTAAGAA TCTAACTATTTTTTAATCTTCCAATTCATTTCACTGTTGCTCTGTCTCTCTCTCTCTTGCTCTCTCTGCAATTTCATAAGTCTTCTGATCGCAATTTCACTACCGAAGAGCAGCGGAAGGACCGTGAGTGAAAGGAGTGCGGCAGGTCTGGCCGGGCTCAGCACCATAGCCGTTCGACTTGGCGGCGGCGGCGGCGGCGGATTTTGGTACCGGAGGAAAAAGAAGACACGGAGCAGGAGTAAGACGAAAGTTAAGCATCGGTTTATGGAGCTTTGGCACAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCACTGTTTCCGCTCGTGTTAGGGCTCGGAAGAGTGGAGCTGGGCTTCTGAAGCTTCATGATGACGTAGAAACCTGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGCTGCGTCGATCAGAGTCGGAACTAGTCAGTCACCGACCGAAGCGCAAGCTGCGGCCGTTTTGGAGAGTCTCTGTGTGGTCCAACCATGCTGCTGCAGCCTCCTCTTACACTGCAACTCATGCGTGAGGCCATCAAACCAACACTCAGCTTCGTCAATTCTGCGCCATCTCTTTGGTATCTTCACCGTTTTTTCAGAACTAACAGCCAATGCTTGCAATGGTACGGAACTTTTTACCAAACTTGTTCAAAGAAATGTGAAGTCTTTGCACACGCAGTCCATCTCTTCCACTTTGAGCAGACAAACACCCTTTTGTAAATAATAATAAAATTTTGTGTTCGTAGCTAAGAA TCTAACTATTTTTTAATCTTCCAATTCATTTCACTGTTGCTCTGTCTCTCTCTCTCTTGCTCTCTCTGCAATTTCATAAGTCTTCTGATCGCAATTTCACTACCGAAGAGCAGCGGAAGGACCGTGAGTGAAAGGAGTGCGGCAGGTCTGGCCGGGCTCAGCACCATAGCCGTTCGACTTGGCGGCGGCGGCGGCGGCGGATTTTGGTACCGGAGGAAAAAGAAGACACGGAGCAGGAGTAAGACGAAAGTTAAGCATCGGTTTATGGAGCTTTGGCACAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCACTGTTTCCGCTCGTGTTAGGGCTCGGAAGAGTGGAGCTGGGCTTCTGAAGCTTCATGATGACGTAGAAACCTGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGCTGCGTCGATCAGAGTCGGAACTAGTCAGTCACCGACCGAAGCGCAAGCTGCGGCCGTTTTGGAGAGTCTCTGTGTGGTCCAACCATGCTGCTGCAGCCTCCTCTTACACTGCAACTCATGCGTGA SNYFLIFQFISLLLCLSLSCSLCNFISLLIAISLPKSSGRTVSERSAAGLAGLSTIAVRLGGGGGGGFWYRRKKKTRSRSKTKVKHRFMELWHKMIFPVRRVWLTVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVSHRPKRKLRPFWRVSVWSNHAAAASSYTATHA
BLAST of Carg18719 vs. NCBI nr
Match: XP_023548962.1 (uncharacterized protein LOC111807461 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 193.0 bits (489), Expect = 9.0e-46 Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of Carg18719 vs. NCBI nr
Match: XP_022991946.1 (uncharacterized protein LOC111488437 [Cucurbita maxima]) HSP 1 Score: 191.4 bits (485), Expect = 2.6e-45 Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of Carg18719 vs. NCBI nr
Match: KGN45194.1 (hypothetical protein Csa_7G430780 [Cucumis sativus]) HSP 1 Score: 187.6 bits (475), Expect = 3.8e-44 Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0
BLAST of Carg18719 vs. NCBI nr
Match: XP_016902643.1 (PREDICTED: uncharacterized protein LOC107991796 [Cucumis melo]) HSP 1 Score: 186.4 bits (472), Expect = 8.4e-44 Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0
BLAST of Carg18719 vs. NCBI nr
Match: XP_022143553.1 (uncharacterized protein LOC111013423 [Momordica charantia]) HSP 1 Score: 184.5 bits (467), Expect = 3.2e-43 Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 0
BLAST of Carg18719 vs. TAIR10
Match: AT5G43150.1 (unknown protein) HSP 1 Score: 61.6 bits (148), Expect = 5.7e-10 Identity = 29/80 (36.25%), Postives = 45/80 (56.25%), Query Frame = 0
BLAST of Carg18719 vs. TrEMBL
Match: tr|A0A0A0K8I7|A0A0A0K8I7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430780 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.5e-44 Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0
BLAST of Carg18719 vs. TrEMBL
Match: tr|A0A1S4E346|A0A1S4E346_CUCME (uncharacterized protein LOC107991796 OS=Cucumis melo OX=3656 GN=LOC107991796 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 5.6e-44 Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0
BLAST of Carg18719 vs. TrEMBL
Match: tr|A0A2P4I0T4|A0A2P4I0T4_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_29333 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 8.1e-35 Identity = 72/93 (77.42%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of Carg18719 vs. TrEMBL
Match: tr|A0A2K2BRZ0|A0A2K2BRZ0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G037400v3 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34 Identity = 72/93 (77.42%), Postives = 86/93 (92.47%), Query Frame = 0
BLAST of Carg18719 vs. TrEMBL
Match: tr|A9PJ91|A9PJ91_9ROSI (Uncharacterized protein OS=Populus trichocarpa x Populus deltoides OX=3695 PE=2 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 5.2e-34 Identity = 71/93 (76.34%), Postives = 85/93 (91.40%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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