Cucsa.106130 (gene) Cucumber (Gy14) v1

NameCucsa.106130
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionNegative regulator of sporulation MDS3
Locationscaffold00929 : 537159 .. 539702 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGCGCTTCCCTTTTTTCAATTTTTCTCTCTTAATAAACAACTCTTCTTTTATTTAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTATCTCTCTGTTTCTCTCTTCACAATTTCACTTCCCAATCGCTGTGGACAAACCCACAGTCATAGTAGATTCTCAGGTCTGGCCGGACTACGCACCATAGCCGTTCGACTAGGCGGCACCGGCACCGGCGGATTTTGGTACTGGAGGAAAAAAAAGAGGCGGAACCGGAGTAAGACCAAAGTTAAGCATAGGTTTATGGAGCTTTGGCATAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCGCTGTTTCAGCTCGTGTCAGGGCTCGGAAAACTGGTAACTCTCTTCTTTACTCTTCCTCTTTATCCTTTTTTTCACTTCCAAGTTTTTCTCCCCTTTTCCGAATCGGTGTTTGATTATTGCTTTGTTTAATTTTTTTCGAATGTGATTCTATCTACTATACGAGATTACGAGTTGCTTCTGATTTGATGGAATCACTGTGTTTCTGTTTCTGTTATTATCTCTGGTTTCTGATTTTCTTTTTCTAACTGTGTGTGCTGCAATTTGAAGGAGAACTTGTGTGGAACATCATCTACAGTTAATTTCCTGCATAAGATCATGATATGTGATTGGAGGGAAGAGATTCTTGTTCTTGATTTGTCGTGAGAGGGAAATTGTAGAAGAAATTAGAAAAATATGAAAGGGTTCACATCCATTTAGGTTTTCAATACAAATTTCTTAGTCTTACTTTTTTTAATACTTTTCACCGACTTTGAATGTGTTATATAACACCTTGATCTATATGCAATGTTTATAAGGCACTTAATCTCAATTCCCAACCACTACGATTGAGAAAGAAAGAGAGAGAGTTGATTCTAGAAGGCAATAAATGGCATGTGATTATTCAACCTCTCTAGTACAATAATTTGGTAGGAAAAATCACAAGAATCCCATATACATACTCATACATACATCCATATACTCCAATTTCTCCCAAATATAGAGACATCAAATCCCTTTGAGAATTCTTAGTTTAAACTTTAAACTAGGAGAAATACAGAGACATCAAATCCCTTTGAGAATTCTTAGTTTAAACTTTAAACTAGAGTAAATTTTGTTTTCAGCTAAGATATTTATCTGTCATGAAGCTTTTCCCATTTGATAATTTACAAAAAGGACCCCACTGGTCATTGTTGTTGAAAGCCAAAAGATTAGAGCCCACTTTTATGAGATTAAAAGTTTTTTTTTATAACAGTTTAGATTGTCCTTATGATTCTTCATAGTCATAATCCCACTTAAATACTAACGGATGGCCACTAGTGCTCATTACTTTTTGAGTAGTGGTGACCCAATTTGATTTGTTTTTGCCTTTCAATTACTATTATAAAAGAGAAGGCCAAGAGGCGTGGCCTGCTATGGCCGTCTCTAGACTTTTATTATTCCTATAGTTCTGTCCAAGTCGCTTTCATTCACAATTTGACTAGCACCACAAATTTTCTCTACCGCATCTCAATGTTTGTGTTTAACATTGCATAGATTTTGGCTTAGGTATTTTTTACTTTTGTTTTGGTGCTTATAATTACAATATGTTCACTTCTTTGAAAATGTTTATTTTGGTTTGTTTACTTCTATAAGAGATTATCATTTTAGTCATTTCATTTTCATTTTTTAAGAGACCAAAATGGTTTTCTCTTCAAAGTTGTACCAAAATAAACCAAAAGTGGAATTACAAGGACCAAATTAACATTTTTGAAAAGTACAAAGATTGAAGTAAACAAAATCCAAAATAGAGGGAGAAAGAAAGTTGAAGTGAAATTGGAATGGAGTAGTTATAGTTACAATATGTTCATTTTGGTCAAGTTAGGTGTCCCTTTAGATGGGCTGGGCTCAAATCAAGCCCATGAAATTCTAAATTTGTTATGTGTGGTGTCCACCTAGATGATCTCTAACTACATGTAGTGTACTAATTCTTTCATTCATAAGAAAAATCCTCCTCAATTAGAAAGCTAAGCTAAAGCAATTGTGTGGATTTTTTCTACTAACAGGAGCTGGACTTCTGAAGCTTCATGATGATGTAGAAACATGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGCTACGTCGATCAGAGTCGGAGTTGGTCAGTCACCAACCGAAACGTAAACAGCGACCGTTTTGGAGAGTCTCCGTGTGGTCCAACCATGCTGCAGCAGCCTCTTCTTACACTGCAACTCATGCTTGAGCTCATCAAATGCAAACACACTGTTCAGCTCAGCTCAGCTTCAATTATGTGCCATCTCTTTGGTATCTTCAACTTTTTGTTTTAAGAAAAAAAGAAAAGAAACTAACAGCGCCAATGCTTGCAAGGCACATAACTTTTTACCAAACTTGTTCAAAGAAATGTGAAGTCTTTGGCAGTTCATCGCTTCCACTTTGAACAGAAAAAAACACACCCTTTTTGTAAGTAATAATAAAAATTTTGGTTTTGTAGCTTAAGAATTGTTCCGGGGTTG

mRNA sequence

TGGCGCTTCCCTTTTTTCAATTTTTCTCTCTTAATAAACAACTCTTCTTTTATTTAAtcttcttcttcttcttcttcttcttcttcGTATCTCTCTGTTTCTCTCTTCACAATTTCACTTCCCAATCGCTGTGGACAAACCCACAGTCATAGTAGATTCTCAGGTCTGGCCGGACTACGCACCATAGCCGTTCGACTAGGCGGCACCGGCACCGGCGGATTTTGGTACTGGAGGAAAAAAAAGAGGCGGAACCGGAGTAAGACCAAAGTTAAGCATAGGTTTATGGAGCTTTGGCATAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCGCTGTTTCAGCTCGTGTCAGGGCTCGGAAAACTGGAGCTGGACTTCTGAAGCTTCATGATGATGTAGAAACATGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGCTACGTCGATCAGAGTCGGAGTTGGTCAGTCACCAACCGAAACGTAAACAGCGACCGTTTTGGAGAGTCTCCGTGTGGTCCAACCATGCTGCAGCAGCCTCTTCTTACACTGCAACTCATGCTTGAGCTCATCAAATGCAAACACACTGTTCAGCTCAGCTCAGCTTCAATTATGTGCCATCTCTTTGGTATCTTCAACTTTTTGTTTTAAGAAAAAAAGAAAAGAAACTAACAGCGCCAATGCTTGCAAGGCACATAACTTTTTACCAAACTTGTTCAAAGAAATGTGAAGTCTTTGGCAGTTCATCGCTTCCACTTTGAACAGAAAAAAACACACCCTTTTTGTAAGTAATAATAAAAATTTTGGTTTTGTAGCTTAAGAATTGTTCCGGGGTTG

Coding sequence (CDS)

ATGGAGCTTTGGCATAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCGCTGTTTCAGCTCGTGTCAGGGCTCGGAAAACTGGAGCTGGACTTCTGAAGCTTCATGATGATGTAGAAACATGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGCTACGTCGATCAGAGTCGGAGTTGGTCAGTCACCAACCGAAACGTAAACAGCGACCGTTTTGGAGAGTCTCCGTGTGGTCCAACCATGCTGCAGCAGCCTCTTCTTACACTGCAACTCATGCTTGA

Protein sequence

MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA*
BLAST of Cucsa.106130 vs. TrEMBL
Match: A0A0A0K8I7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430780 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.0e-47
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1

Query: 1  MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL
Sbjct: 1  MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60

Query: 61 VSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 94
          VSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA
Sbjct: 61 VSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 93

BLAST of Cucsa.106130 vs. TrEMBL
Match: A9PJ91_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.3e-35
Identity = 72/93 (77.42%), Postives = 85/93 (91.40%), Query Frame = 1

Query: 1  MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          M+LWHKMIFPVRRVWL+VSARV+ARK GA LLKLH+DV+TCGYEDV+VMWE+LRRSESEL
Sbjct: 1  MDLWHKMIFPVRRVWLSVSARVKARKNGANLLKLHNDVQTCGYEDVQVMWEILRRSESEL 60

Query: 61 VSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 94
          ++  PKRKQRPFWRV VWSNH +AASS++  H+
Sbjct: 61 MASHPKRKQRPFWRVFVWSNH-SAASSFSPNHS 92

BLAST of Cucsa.106130 vs. TrEMBL
Match: A0A067E4H7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034519mg PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.5e-34
Identity = 68/92 (73.91%), Postives = 84/92 (91.30%), Query Frame = 1

Query: 1  MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELW+KMIFPVRRVW+AVS+RV+ARK GAG+LKL DDV+TC Y+DV+VMWEML RSESE+
Sbjct: 1  MELWNKMIFPVRRVWVAVSSRVKARKNGAGILKLRDDVQTCEYQDVQVMWEMLSRSESEM 60

Query: 61 VSHQPKRKQRPFWRVSVWSNHAAAASSYTATH 93
          ++H PKR+QRPFWRVSVWSNH ++A S++A H
Sbjct: 61 INHNPKRRQRPFWRVSVWSNHGSSA-SFSAKH 91

BLAST of Cucsa.106130 vs. TrEMBL
Match: V4UND2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026849mg PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.5e-34
Identity = 68/92 (73.91%), Postives = 84/92 (91.30%), Query Frame = 1

Query: 1  MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELW+KMIFPVRRVW+AVS+RV+ARK GAG+LKL DDV+TC Y+DV+VMWEML RSESE+
Sbjct: 1  MELWNKMIFPVRRVWVAVSSRVKARKNGAGILKLRDDVQTCEYQDVQVMWEMLSRSESEM 60

Query: 61 VSHQPKRKQRPFWRVSVWSNHAAAASSYTATH 93
          ++H PKR+QRPFWRVSVWSNH ++A S++A H
Sbjct: 61 INHNPKRRQRPFWRVSVWSNHGSSA-SFSAKH 91

BLAST of Cucsa.106130 vs. TrEMBL
Match: K4BLT5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.0e-32
Identity = 64/90 (71.11%), Postives = 79/90 (87.78%), Query Frame = 1

Query: 4  WHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVSH 63
          WHKM+FPVRRVW AVSARV+ARK GAGLLKLHDD++TCGYEDV+VMWEMLR++ESE+ S 
Sbjct: 5  WHKMVFPVRRVWFAVSARVKARKNGAGLLKLHDDIQTCGYEDVQVMWEMLRKTESEVTSR 64

Query: 64 QPKRKQRPFWRVSVWSNHAAAASSYTATHA 94
            KRK+RP WR+ VWSNH ++ SS+++ HA
Sbjct: 65 HHKRKRRPLWRIFVWSNH-SSNSSFSSEHA 93

BLAST of Cucsa.106130 vs. TAIR10
Match: AT5G43150.1 (AT5G43150.1 unknown protein)

HSP 1 Score: 62.8 bits (151), Expect = 1.3e-10
Identity = 28/77 (36.36%), Postives = 46/77 (59.74%), Query Frame = 1

Query: 2  ELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL- 61
          E W+ M FP RR+W   + RV  R   +GLL+L  DV +C YED+ +MW +L ++E    
Sbjct: 8  EWWNTMAFPTRRIWNRFTVRVGFRH--SGLLRLEHDVSSCEYEDIHIMWNLLHKNEDLTR 67

Query: 62 --VSHQPKRKQRPFWRV 76
            +  Q +++++P W +
Sbjct: 68 VPIQQQQQQRKKPCWNL 82

BLAST of Cucsa.106130 vs. NCBI nr
Match: gi|700189961|gb|KGN45194.1| (hypothetical protein Csa_7G430780 [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 2.8e-47
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1

Query: 1  MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL
Sbjct: 1  MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60

Query: 61 VSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 94
          VSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA
Sbjct: 61 VSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 93

BLAST of Cucsa.106130 vs. NCBI nr
Match: gi|118489278|gb|ABK96444.1| (unknown [Populus trichocarpa x Populus deltoides])

HSP 1 Score: 156.8 bits (395), Expect = 1.9e-35
Identity = 72/93 (77.42%), Postives = 85/93 (91.40%), Query Frame = 1

Query: 1  MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          M+LWHKMIFPVRRVWL+VSARV+ARK GA LLKLH+DV+TCGYEDV+VMWE+LRRSESEL
Sbjct: 1  MDLWHKMIFPVRRVWLSVSARVKARKNGANLLKLHNDVQTCGYEDVQVMWEILRRSESEL 60

Query: 61 VSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 94
          ++  PKRKQRPFWRV VWSNH +AASS++  H+
Sbjct: 61 MASHPKRKQRPFWRVFVWSNH-SAASSFSPNHS 92

BLAST of Cucsa.106130 vs. NCBI nr
Match: gi|567870155|ref|XP_006427699.1| (hypothetical protein CICLE_v10026849mg [Citrus clementina])

HSP 1 Score: 152.5 bits (384), Expect = 3.6e-34
Identity = 68/92 (73.91%), Postives = 84/92 (91.30%), Query Frame = 1

Query: 1  MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELW+KMIFPVRRVW+AVS+RV+ARK GAG+LKL DDV+TC Y+DV+VMWEML RSESE+
Sbjct: 1  MELWNKMIFPVRRVWVAVSSRVKARKNGAGILKLRDDVQTCEYQDVQVMWEMLSRSESEM 60

Query: 61 VSHQPKRKQRPFWRVSVWSNHAAAASSYTATH 93
          ++H PKR+QRPFWRVSVWSNH ++A S++A H
Sbjct: 61 INHNPKRRQRPFWRVSVWSNHGSSA-SFSAKH 91

BLAST of Cucsa.106130 vs. NCBI nr
Match: gi|568881138|ref|XP_006493446.1| (PREDICTED: uncharacterized protein LOC102619868 [Citrus sinensis])

HSP 1 Score: 150.2 bits (378), Expect = 1.8e-33
Identity = 67/92 (72.83%), Postives = 83/92 (90.22%), Query Frame = 1

Query: 1  MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60
          MELW+KMIFPVRRVW+AVS+RV+ARK GAG+LKL DDV+TC Y+DV+VMWEML RSESE+
Sbjct: 1  MELWNKMIFPVRRVWVAVSSRVKARKNGAGILKLRDDVQTCEYQDVQVMWEMLSRSESEM 60

Query: 61 VSHQPKRKQRPFWRVSVWSNHAAAASSYTATH 93
          ++H PKR+QRPFWRV VWSNH ++A S++A H
Sbjct: 61 INHNPKRRQRPFWRVLVWSNHGSSA-SFSAKH 91

BLAST of Cucsa.106130 vs. NCBI nr
Match: gi|970019969|ref|XP_015071194.1| (PREDICTED: uncharacterized protein LOC107015442 [Solanum pennellii])

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-31
Identity = 63/90 (70.00%), Postives = 79/90 (87.78%), Query Frame = 1

Query: 4  WHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVSH 63
          WHKM+FPVRRVW AVSARV+ARK GAGLLKLHDD++TCGYEDV+VMWEMLR++ESE+ + 
Sbjct: 5  WHKMVFPVRRVWFAVSARVKARKKGAGLLKLHDDIQTCGYEDVQVMWEMLRKTESEVTNR 64

Query: 64 QPKRKQRPFWRVSVWSNHAAAASSYTATHA 94
            KRK+RP WR+ VWSNH ++ SS+++ HA
Sbjct: 65 HHKRKRRPLWRIFVWSNH-SSNSSFSSEHA 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K8I7_CUCSA2.0e-47100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430780 PE=4 SV=1[more]
A9PJ91_9ROSI1.3e-3577.42Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2... [more]
A0A067E4H7_CITSI2.5e-3473.91Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034519mg PE=4 SV=1[more]
V4UND2_9ROSI2.5e-3473.91Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026849mg PE=4 SV=1[more]
K4BLT5_SOLLC4.0e-3271.11Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G43150.11.3e-1036.36 unknown protein[more]
Match NameE-valueIdentityDescription
gi|700189961|gb|KGN45194.1|2.8e-47100.00hypothetical protein Csa_7G430780 [Cucumis sativus][more]
gi|118489278|gb|ABK96444.1|1.9e-3577.42unknown [Populus trichocarpa x Populus deltoides][more]
gi|567870155|ref|XP_006427699.1|3.6e-3473.91hypothetical protein CICLE_v10026849mg [Citrus clementina][more]
gi|568881138|ref|XP_006493446.1|1.8e-3372.83PREDICTED: uncharacterized protein LOC102619868 [Citrus sinensis][more]
gi|970019969|ref|XP_015071194.1|1.7e-3170.00PREDICTED: uncharacterized protein LOC107015442 [Solanum pennellii][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.106130.1Cucsa.106130.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33181FAMILY NOT NAMEDcoord: 1..90
score: 5.9
NoneNo IPR availablePANTHERPTHR33181:SF4SUBFAMILY NOT NAMEDcoord: 1..90
score: 5.9