Cucsa.087450 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.087450
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Glutaredoxin
Location	scaffold00888 : 15132 .. 15998 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTTACTCCAAACGACACCTGTACTCTTTACAAATCTACAATCATGCACCAAGCAATCCCTTACCGATCATGGCAATCAATTGACACAAAaCAAACCACATTATCAATGAGACCACCATGGGCCGCCACCGTCGTCGGTGGATCAGCAGCGTCCATGCCCTCCGAGGGTGGAGGAAGAAGAAGGGACGTCGTTGCGTCAGTTTCCGAGAGTGCGGCGATAGTGTTTGCTAGAAGAGGATGCTGTATGAGCCATGTGGTAAAGCGTCTTCTATTAGGACTGGGAGCCAATCCGGCGGTGTATGAAGTGGATGAAGAACAAGAATCTGGAGTGCTCAAGGAATTGGAGGCTTTTGCTAAATCTTCTAATGTTAATTTGCAATTGCCGGCTGTCTTTATCGGAGGCACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAGGCTGGAGCCTTGTGGCTTTAATTTTCCTTTTTtCTTTATATCAATCCTCAATCCTCAATCCTCAATCCTCAATCCTCAATCCTCAATTTTCGTTTtATTATTTTTtCCTTCTATCAAACAGGgATGTTTTTTGTTGCTATCACTTTTGGTTGTGGCATCTGTTTTCCTGTTTGTCAATGAGGGGATTTTTTTTtCTTGTTAGAGTTCGTAAATGGAATCCTCAACTATTGATGAAAATATTTGTTAATACTACATATATCAAATTGGTTTTTTTTTtttCCTTtCTTTtCTTGTTTTAATTTGTTTGTGCAGTCTTGTCATGAAGTCAATGTTTCTCGCATATTAAAAAaGGTAAGCTTATTGTAGAGGAAGATTAATCTAATTTGGAAA

mRNA sequence

CAATTTACTCCAAACGACACCTGTACTCTTTACAAATCTACAATCATGCACCAAGCAATCCCTTACCGATCATGGCAATCAATTGACACAAAACAAACCACATTATCAATGAGACCACCATGGGCCGCCACCGTCGTCGGTGGATCAGCAGCGTCCATGCCCTCCGAGGGTGGAGGAAGAAGAAGGGACGTCGTTGCGTCAGTTTCCGAGAGTGCGGCGATAGTGTTTGCTAGAAGAGGATGCTGTATGAGCCATGTGGTAAAGCGTCTTCTATTAGGACTGGGAGCCAATCCGGCGGTGTATGAAGTGGATGAAGAACAAGAATCTGGAGTGCTCAAGGAATTGGAGGCTTTTGCTAAATCTTCTAATGTTAATTTGCAATTGCCGGCTGTCTTTATCGGAGGCACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAGGCTGGAGCCTTGTGGCTTTAATTTTCCTTTTTTCTTTATATCAATCCTCAATCCTCAATCCTCAATCCTCAATCCTCAATCCTCAATTTTCGTTTTATTATTTTTTCCTTCTATCAAACAGGGATGTTTTTTGTTGCTATCACTTTTGGTTGTGGCATCTGTTTTCCTGTTTGTCAATGAGGGGATTTTTTTTTCTTGTTAGAGTTCGTAAATGGAATCCTCAACTATTGATGAAAATATTTGTTAATACTACATATATCAAATTGGTTTTTTTTTTTTCCTTTCTTTTCTTGTTTTAATTTGTTTGTGCAGTCTTGTCATGAAGTCAATGTTTCTCGCATATTAAAAAAGGTAAGCTTATTGTAGAGGAAGATTAATCTAATTTGGAAA

Coding sequence (CDS)

ATGCACCAAGCAATCCCTTACCGATCATGGCAATCAATTGACACAAAaCAAACCACATTATCAATGAGACCACCATGGGCCGCCACCGTCGTCGGTGGATCAGCAGCGTCCATGCCCTCCGAGGGTGGAGGAAGAAGAAGGGACGTCGTTGCGTCAGTTTCCGAGAGTGCGGCGATAGTGTTTGCTAGAAGAGGATGCTGTATGAGCCATGTGGTAAAGCGTCTTCTATTAGGACTGGGAGCCAATCCGGCGGTGTATGAAGTGGATGAAGAACAAGAATCTGGAGTGCTCAAGGAATTGGAGGCTTTTGCTAAATCTTCTAATGTTAATTTGCAATTGCCGGCTGTCTTTATCGGAGGCACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAGGCTGGAGCCTTGTGGCTTTAA

Protein sequence

MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPILKQAGALWL*

Homology

[Close]

BLAST of Cucsa.087450 vs. Swiss-Prot
Match: GRXC9_ARATH (Glutaredoxin-C9 OS=Arabidopsis thaliana GN=GRXC9 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.4e-33
Identity = 76/125 (60.80%), Postives = 91/125 (72.80%), Query Frame = 1


Query: 29  TVVGGSAA--SMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVY 88
           T VG S    S+ ++G G R  +V  V E+A IV  RRGCCM HVV+RLLLGLG NPAV 
Sbjct: 15  TTVGESLRPLSLKTQGNGERVRMV--VEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVL 74

Query: 89  EVDEEQESGVLKELEAF-AKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPILKQA 148
           E+DEE+E  VL ELE    +     ++LPAV++GG LFGGLDRVMATHISG+LVPILK+ 
Sbjct: 75  EIDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEV 134

Query: 149 GALWL 151
           GALWL
Sbjct: 135 GALWL 137

[Close]

BLAST of Cucsa.087450 vs. Swiss-Prot
Match: GRXS9_ORYSJ (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 8.1e-28
Identity = 76/154 (49.35%), Postives = 94/154 (61.04%), Query Frame = 1


Query: 1   MHQAIPY---RSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESA 60
           M+QAIPY   R+W +        + RP  AA      AA  P    G   +V  +V+E  
Sbjct: 1   MYQAIPYNANRAWPA--------ASRPATAA------AAPPPPPPRGEEEEVRRAVAECP 60

Query: 61  AIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEQE-SGVLKELEAFAKSSNVNLQLPAV 120
            +V  R GCC+SHVVKRLL GLG NPAV+EV  E E +GV+        +    + LPAV
Sbjct: 61  VVVVGRSGCCLSHVVKRLLQGLGVNPAVHEVAGEAELAGVV--------AGGGGVALPAV 120

Query: 121 FIGGTLFGGLDRVMATHISGDLVPILKQAGALWL 151
           F+GG L GGLDR+MA HISG+LVPILK+AGALWL
Sbjct: 121 FVGGRLLGGLDRLMAVHISGELVPILKEAGALWL 132

[Close]

BLAST of Cucsa.087450 vs. Swiss-Prot
Match: GRXS5_ORYSJ (Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica GN=GRXS5 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27
Identity = 71/153 (46.41%), Postives = 88/153 (57.52%), Query Frame = 1


Query: 1   MHQAIPY---RSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESA 60
           M+QAIPY   R W   +   + + +      T V G        G     +V  +V+ES 
Sbjct: 1   MYQAIPYSSTRPWLRPEPAASVVDVVKVETTTAVAGRGGEAEVVGEEEAAEVRRAVAESP 60

Query: 61  AIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVF 120
            +V  RRGCC+ HVVKRLL GLG NPAV+EV  E        L+    +      LPAVF
Sbjct: 61  VLVVGRRGCCLIHVVKRLLQGLGVNPAVHEVAGEAA------LKGVVPAGGEAAALPAVF 120

Query: 121 IGGTLFGGLDRVMATHISGDLVPILKQAGALWL 151
           +GG L GGLDR+MA HISG+LVPILK+AGALWL
Sbjct: 121 VGGKLLGGLDRLMAVHISGELVPILKKAGALWL 147

[Close]

BLAST of Cucsa.087450 vs. Swiss-Prot
Match: GRXS3_ORYSJ (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica GN=GRXS3 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.9e-25
Identity = 61/131 (46.56%), Postives = 79/131 (60.31%), Query Frame = 1


Query: 34  SAASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEQE 93
           SAA+M +      R+V  +V E   +V  RRGCCM+HV +RLLLG GANPAV EV ++ +
Sbjct: 6   SAAAMAAAAADEEREVRRAVEEKPVVVVGRRGCCMAHVARRLLLGQGANPAVLEVGDDAD 65

Query: 94  SGVLKELEAFAK--------------SSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLV 151
              L +    A+                   +  PAVFIGG L GGLDR+MA H++G+LV
Sbjct: 66  PAALVDAALQARRRKDGGDKAAAGDGGGGAAVAFPAVFIGGRLVGGLDRLMAMHMAGELV 125

[Close]

BLAST of Cucsa.087450 vs. Swiss-Prot
Match: GRS13_ARATH (Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana GN=GRXS13 PE=2 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 8.7e-22
Identity = 53/101 (52.48%), Postives = 68/101 (67.33%), Query Frame = 1


Query: 53  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESG---VLKELEAFAKSSNV 112
           V E+A +VFARRGCC+ HV KRLLL  G NP V E+ EE  +    ++ + E        
Sbjct: 60  VMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDNNNYDNIVSDKE-------- 119

Query: 113 NLQLPAVFIGGTLFGGLDRVMATHISGDLVPILKQAGALWL 151
             +LP ++IGG LFGGL+ +MA HI+GDLVP L+QAGALWL
Sbjct: 120 --KLPMMYIGGKLFGGLENLMAAHINGDLVPTLRQAGALWL 150

[Close]

BLAST of Cucsa.087450 vs. TrEMBL
Match: U3RBI7_CUCSA (Glutaredoxin OS=Cucumis sativus GN=GRX6 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 4.6e-78
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60
           MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60

Query: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGG 120
           FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGG
Sbjct: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGG 120

Query: 121 TLFGGLDRVMATHISGDLVPILKQAGALWL 151
           TLFGGLDRVMATHISGDLVPILKQAGALWL
Sbjct: 121 TLFGGLDRVMATHISGDLVPILKQAGALWL 150

[Close]

BLAST of Cucsa.087450 vs. TrEMBL
Match: A0A0A0LT46_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G412500 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 4.4e-65
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1


Query: 22  MRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGA 81
           MRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGA
Sbjct: 1   MRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGA 60

Query: 82  NPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPI 141
           NPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPI
Sbjct: 61  NPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPI 120

Query: 142 LKQAGALWL 151
           LKQAGALWL
Sbjct: 121 LKQAGALWL 129

[Close]

BLAST of Cucsa.087450 vs. TrEMBL
Match: G7JUX5_MEDTR (Glutaredoxin-C1 protein OS=Medicago truncatula GN=MTR_4g079110 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.0e-37
Identity = 92/158 (58.23%), Postives = 106/158 (67.09%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVG-----GSAASMPSEGGGRRRDVVA---S 60
           M QAIPYRSW   +T  T  ++  P   T          ++  PS       D       
Sbjct: 1   MQQAIPYRSWTH-NTSTTHFNVIKPHILTTTKIHNTIDESSHRPSSFNFNEEDKTMFHNM 60

Query: 61  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQ 120
           VSE+A IVFARRGCCMSHVVKRLLLGLG NPAV+EV+E+ E G++KELE+ A    V  Q
Sbjct: 61  VSENAVIVFARRGCCMSHVVKRLLLGLGVNPAVHEVEEKDEVGLVKELESIANEEKV--Q 120

Query: 121 LPAVFIGGTLFGGLDRVMATHISGDLVPILKQAGALWL 151
            PAVFIGG LFGGLDR+MATHISG+LVPILKQAGALWL
Sbjct: 121 FPAVFIGGNLFGGLDRIMATHISGELVPILKQAGALWL 155

[Close]

BLAST of Cucsa.087450 vs. TrEMBL
Match: A0A061E5A7_THECC (Glutaredoxin, putative OS=Theobroma cacao GN=TCM_008240 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.1e-37
Identity = 91/152 (59.87%), Postives = 106/152 (69.74%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60
           M QAIPY+SW       TT S R P       G    + S GGG + DV+  V E+A IV
Sbjct: 1   MQQAIPYKSWPL--PCATTTSHRAPSTL----GHNNLVLSRGGGSK-DVLNIVLENAVIV 60

Query: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAK--SSNVNLQLPAVFI 120
           FAR+GCCMSHVV+RLLL LG NPAVYE+D++ E GVL ELE   K    +  +QLPAVFI
Sbjct: 61  FARKGCCMSHVVRRLLLALGVNPAVYEIDDKDEVGVLNELEMICKGDGKDKKVQLPAVFI 120

Query: 121 GGTLFGGLDRVMATHISGDLVPILKQAGALWL 151
           GG LFGGLD+VMATHISG+LVP+LK AGALWL
Sbjct: 121 GGRLFGGLDKVMATHISGELVPVLKDAGALWL 145

[Close]

BLAST of Cucsa.087450 vs. TrEMBL
Match: A0A0D2NFU0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G198800 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 8.7e-37
Identity = 88/152 (57.89%), Postives = 106/152 (69.74%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60
           M QAIPY+SW       T+   R   + T +G +         GR +DV+  VSE+A IV
Sbjct: 1   MQQAIPYKSWPLPCIDATSHRAR---STTTLGHN---------GRGKDVLNIVSENAVIV 60

Query: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVN--LQLPAVFI 120
            AR+GCCMSHVV+RLLL LG NPAV+E+DEE E+GVL EL    K +  N  +QLPAVFI
Sbjct: 61  LARKGCCMSHVVRRLLLTLGVNPAVHEIDEEDEAGVLNELGTICKGTENNKMVQLPAVFI 120

Query: 121 GGTLFGGLDRVMATHISGDLVPILKQAGALWL 151
           GG LFGGLD+VMATHISGDL+P+LK AGALWL
Sbjct: 121 GGRLFGGLDKVMATHISGDLIPVLKDAGALWL 140

[Close]

BLAST of Cucsa.087450 vs. TAIR10
Match: AT1G28480.1 (AT1G28480.1 Thioredoxin superfamily protein)

HSP 1 Score: 141.4 bits (355), Expect = 4.7e-34
Identity = 76/125 (60.80%), Postives = 91/125 (72.80%), Query Frame = 1


Query: 29  TVVGGSAA--SMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVY 88
           T VG S    S+ ++G G R  +V  V E+A IV  RRGCCM HVV+RLLLGLG NPAV 
Sbjct: 15  TTVGESLRPLSLKTQGNGERVRMV--VEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVL 74

Query: 89  EVDEEQESGVLKELEAF-AKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPILKQA 148
           E+DEE+E  VL ELE    +     ++LPAV++GG LFGGLDRVMATHISG+LVPILK+ 
Sbjct: 75  EIDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEV 134

Query: 149 GALWL 151
           GALWL
Sbjct: 135 GALWL 137

[Close]

BLAST of Cucsa.087450 vs. TAIR10
Match: AT4G15700.1 (AT4G15700.1 Thioredoxin superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 7.8e-21
Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 1


Query: 53  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQ 112
           +SE + ++F++  CCMSH +K L L LG NP +YE+DE       KE+E        +  
Sbjct: 8   ISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRG---KEIEHALAQLGCSPT 67

Query: 113 LPAVFIGGTLFGGLDRVMATHISGDLVPILKQAGALWL 151
           +P VFIGG L GG ++VM+ H++  LVP+LK+AGALWL
Sbjct: 68  VPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Cucsa.087450 vs. TAIR10
Match: AT3G02000.1 (AT3G02000.1 Thioredoxin superfamily protein)

HSP 1 Score: 95.9 bits (237), Expect = 2.3e-20
Identity = 57/124 (45.97%), Postives = 75/124 (60.48%), Query Frame = 1


Query: 31  VGGSAASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDE 90
           +G     M ++ G  R + +AS  ESA ++F+   CCM H VK L  G+G +PAV+E+D 
Sbjct: 16  LGFGGLGMVADTGLLRIESLAS--ESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDL 75

Query: 91  EQESG----VLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPILKQAG 150
               G     L  L   + SS+    LP VFIGG L G +DRVMA+HI+G LVP+LK AG
Sbjct: 76  HPYGGDIQRALIRLLGCSGSSSPG-SLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAG 135

[Close]

BLAST of Cucsa.087450 vs. TAIR10
Match: AT4G15690.1 (AT4G15690.1 Thioredoxin superfamily protein)

HSP 1 Score: 95.1 bits (235), Expect = 3.9e-20
Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = 1


Query: 53  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQ 112
           +SE + ++F++  CCMSH +K L L  G NP +YE+DE     + +E+E        +  
Sbjct: 8   ISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDE---INIGREIEQALAQLGCSPT 67

Query: 113 LPAVFIGGTLFGGLDRVMATHISGDLVPILKQAGALWL 151
           +P VFIGG L GG ++VM+ H++  LVP+LK+AGALWL
Sbjct: 68  VPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Cucsa.087450 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 94.7 bits (234), Expect = 5.1e-20
Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 1


Query: 49  VVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSN 108
           +   V E   +++++  CCMSH +K LL   GANPAVYE+DE       +E+E       
Sbjct: 4   ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRG---REIEQALLRLG 63

Query: 109 VNLQLPAVFIGGTLFGGLDRVMATHISGDLVPILKQAGALWL 151
            +  +P VFIGG L GG + VM+ H++G L+P+LK+AGALW+
Sbjct: 64  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of Cucsa.087450 vs. NCBI nr
Match: gi|564112188|ref|NP_001274138.1| (glutaredoxin-C9-like [Cucumis sativus])

HSP 1 Score: 298.5 bits (763), Expect = 6.5e-78
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60
           MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60

Query: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGG 120
           FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGG
Sbjct: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGG 120

Query: 121 TLFGGLDRVMATHISGDLVPILKQAGALWL 151
           TLFGGLDRVMATHISGDLVPILKQAGALWL
Sbjct: 121 TLFGGLDRVMATHISGDLVPILKQAGALWL 150

[Close]

BLAST of Cucsa.087450 vs. NCBI nr
Match: gi|659111862|ref|XP_008455946.1| (PREDICTED: glutaredoxin-C9-like [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 1.4e-72
Identity = 142/150 (94.67%), Postives = 145/150 (96.67%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60
           MHQAIPYRSWQSIDTKQTTL+MRPPWA +V  G +ASMPSEGGGRRRDVVASVSESAAIV
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSV--GGSASMPSEGGGRRRDVVASVSESAAIV 60

Query: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGG 120
           FARRGCCMSHVVKRLLLGLGANPAVYEVDEE ESGVLKELEAFAKSSNVNLQLPAVFIGG
Sbjct: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGG 120

Query: 121 TLFGGLDRVMATHISGDLVPILKQAGALWL 151
           TLFGGLDRVMATHISGDLVPILKQAGALWL
Sbjct: 121 TLFGGLDRVMATHISGDLVPILKQAGALWL 148

[Close]

BLAST of Cucsa.087450 vs. NCBI nr
Match: gi|700208087|gb|KGN63206.1| (hypothetical protein Csa_2G412500 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 6.3e-65
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1


Query: 22  MRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGA 81
           MRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGA
Sbjct: 1   MRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGA 60

Query: 82  NPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPI 141
           NPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPI
Sbjct: 61  NPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPI 120

Query: 142 LKQAGALWL 151
           LKQAGALWL
Sbjct: 121 LKQAGALWL 129

[Close]

BLAST of Cucsa.087450 vs. NCBI nr
Match: gi|357474467|ref|XP_003607518.1| (glutaredoxin-C1 protein [Medicago truncatula])

HSP 1 Score: 162.9 bits (411), Expect = 4.3e-37
Identity = 92/158 (58.23%), Postives = 106/158 (67.09%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVG-----GSAASMPSEGGGRRRDVVA---S 60
           M QAIPYRSW   +T  T  ++  P   T          ++  PS       D       
Sbjct: 1   MQQAIPYRSWTH-NTSTTHFNVIKPHILTTTKIHNTIDESSHRPSSFNFNEEDKTMFHNM 60

Query: 61  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQ 120
           VSE+A IVFARRGCCMSHVVKRLLLGLG NPAV+EV+E+ E G++KELE+ A    V  Q
Sbjct: 61  VSENAVIVFARRGCCMSHVVKRLLLGLGVNPAVHEVEEKDEVGLVKELESIANEEKV--Q 120

Query: 121 LPAVFIGGTLFGGLDRVMATHISGDLVPILKQAGALWL 151
            PAVFIGG LFGGLDR+MATHISG+LVPILKQAGALWL
Sbjct: 121 FPAVFIGGNLFGGLDRIMATHISGELVPILKQAGALWL 155

[Close]

BLAST of Cucsa.087450 vs. NCBI nr
Match: gi|590691177|ref|XP_007043710.1| (Glutaredoxin, putative [Theobroma cacao])

HSP 1 Score: 162.2 bits (409), Expect = 7.3e-37
Identity = 91/152 (59.87%), Postives = 106/152 (69.74%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60
           M QAIPY+SW       TT S R P       G    + S GGG + DV+  V E+A IV
Sbjct: 1   MQQAIPYKSWPL--PCATTTSHRAPSTL----GHNNLVLSRGGGSK-DVLNIVLENAVIV 60

Query: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAK--SSNVNLQLPAVFI 120
           FAR+GCCMSHVV+RLLL LG NPAVYE+D++ E GVL ELE   K    +  +QLPAVFI
Sbjct: 61  FARKGCCMSHVVRRLLLALGVNPAVYEIDDKDEVGVLNELEMICKGDGKDKKVQLPAVFI 120

Query: 121 GGTLFGGLDRVMATHISGDLVPILKQAGALWL 151
           GG LFGGLD+VMATHISG+LVP+LK AGALWL
Sbjct: 121 GGRLFGGLDKVMATHISGELVPVLKDAGALWL 145

The following BLAST results are available for this feature:

BLAST of Cucsa.087450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRXC9_ARATH	8.4e-33	60.80	Glutaredoxin-C9 OS=Arabidopsis thaliana GN=GRXC9 PE=1 SV=1	[more]
GRXS9_ORYSJ	8.1e-28	49.35	Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica GN=GRXS9 PE=3 SV=1	[more]
GRXS5_ORYSJ	1.1e-27	46.41	Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica GN=GRXS5 PE=2 SV=1	[more]
GRXS3_ORYSJ	2.9e-25	46.56	Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica GN=GRXS3 PE=2 SV=1	[more]
GRS13_ARATH	8.7e-22	52.48	Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana GN=GRXS13 PE=2 SV=2	[more]

BLAST of Cucsa.087450 vs. TrEMBL


Match Name	E-value	Identity	Description
U3RBI7_CUCSA	4.6e-78	100.00	Glutaredoxin OS=Cucumis sativus GN=GRX6 PE=2 SV=1	[more]
A0A0A0LT46_CUCSA	4.4e-65	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G412500 PE=4 SV=1	[more]
G7JUX5_MEDTR	3.0e-37	58.23	Glutaredoxin-C1 protein OS=Medicago truncatula GN=MTR_4g079110 PE=2 SV=1	[more]
A0A061E5A7_THECC	5.1e-37	59.87	Glutaredoxin, putative OS=Theobroma cacao GN=TCM_008240 PE=4 SV=1	[more]
A0A0D2NFU0_GOSRA	8.7e-37	57.89	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G198800 PE=4 SV=1	[more]

BLAST of Cucsa.087450 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G28480.1	4.7e-34	60.80	Thioredoxin superfamily protein	[more]
AT4G15700.1	7.8e-21	45.92	Thioredoxin superfamily protein	[more]
AT3G02000.1	2.3e-20	45.97	Thioredoxin superfamily protein	[more]
AT4G15690.1	3.9e-20	43.88	Thioredoxin superfamily protein	[more]
AT5G18600.1	5.1e-20	43.14	Thioredoxin superfamily protein	[more]

BLAST of Cucsa.087450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|564112188\|ref\|NP_001274138.1\|	6.5e-78	100.00	glutaredoxin-C9-like [Cucumis sativus]	[more]
gi\|659111862\|ref\|XP_008455946.1\|	1.4e-72	94.67	PREDICTED: glutaredoxin-C9-like [Cucumis melo]	[more]
gi\|700208087\|gb\|KGN63206.1\|	6.3e-65	100.00	hypothetical protein Csa_2G412500 [Cucumis sativus]	[more]
gi\|357474467\|ref\|XP_003607518.1\|	4.3e-37	58.23	glutaredoxin-C1 protein [Medicago truncatula]	[more]
gi\|590691177\|ref\|XP_007043710.1\|	7.3e-37	59.87	Glutaredoxin, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002109	Glutaredoxin
IPR011905	GlrX-like_pln_2
IPR012336	Thioredoxin-like_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.087450.1	Cucsa.087450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 59..122 score: 1.
IPR002109	Glutaredoxin	PROFILE	PS51354	GLUTAREDOXIN_2	coord: 46..149 score: 18
IPR011905	Glutaredoxin-like, plant II	TIGRFAMs	TIGR02189	TIGR02189	coord: 51..150 score: 7.1
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 53..147 score: 1.5
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 52..149 score: 2.24
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 47..150 score: 2.2
None	No IPR available	PANTHER	PTHR10168:SF111	MONOTHIOL GLUTAREDOXIN-S13	coord: 47..150 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.087450	MELO3C019326	Melon (DHL92) v3.5.1	cgymeB099
Cucsa.087450	CSPI02G25960	Wild cucumber (PI 183967)	cgycpiB093
Cucsa.087450	CmaCh20G005780	Cucurbita maxima (Rimu)	cgycmaB0169
Cucsa.087450	CmoCh20G006540	Cucurbita moschata (Rifu)	cgycmoB0164
Cucsa.087450	CmoCh02G002010	Cucurbita moschata (Rifu)	cgycmoB0165
Cucsa.087450	Lsi10G000840	Bottle gourd (USVL1VR-Ls)	cgylsiB096
Cucsa.087450	Cp4.1LG16g04100	Cucurbita pepo (Zucchini)	cgycpeB0163
Cucsa.087450	Cp4.1LG05g14110	Cucurbita pepo (Zucchini)	cgycpeB0166
Cucsa.087450	MELO3C019326.2	Melon (DHL92) v3.6.1	cgymedB098
Cucsa.087450	CsaV3_2G034500	Cucumber (Chinese Long) v3	cgycucB092
Cucsa.087450	Cla97C02G036310	Watermelon (97103) v2	cgywmbB098
Cucsa.087450	Bhi10G001065	Wax gourd	cgywgoB113
Cucsa.087450	Carg05124	Silver-seed gourd	carcgyB0917

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None