CmaCh20G005780 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G005780
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Glutaredoxin
Location	Cma_Chr20 : 2763149 .. 2763586 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCAAGCAATTCCTTACCGGTCATGGCAATCAATTGACACAAAACAGGGCACATTATCAATGAGATCAGCATGGGGGGGTGGATCAGCGTCTGCGACGGCGGAAGGTGGGGGATCCAGAAGCGATGTGATTGCGTCAGTATCGGAGAATGCGGCGATAGTGTTTGCTAGAAGAGGGTGCTGTATGAGCCATGTGGTGAAGCGGCTTCTTCTGGGGTTGGGTGCTAATCCGGCGGTGTACGAGGTGGAGGAAGAACAAGAATCCGGCGTCCTGAAGGAATTGGAGGCCTTCGCCAAATCTCCCAACGCCGAGATACAGTTGCCGGCGGTGTTTATTGGGGGCACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGAATTGGTTCCCATTTTGAAACAAGCCGGCGCTTTGTGGCTTTGA

mRNA sequence

ATGCACCAAGCAATTCCTTACCGGTCATGGCAATCAATTGACACAAAACAGGGCACATTATCAATGAGATCAGCATGGGGGGGTGGATCAGCGTCTGCGACGGCGGAAGGTGGGGGATCCAGAAGCGATGTGATTGCGTCAGTATCGGAGAATGCGGCGATAGTGTTTGCTAGAAGAGGGTGCTGTATGAGCCATGTGGTGAAGCGGCTTCTTCTGGGGTTGGGTGCTAATCCGGCGGTGTACGAGGTGGAGGAAGAACAAGAATCCGGCGTCCTGAAGGAATTGGAGGCCTTCGCCAAATCTCCCAACGCCGAGATACAGTTGCCGGCGGTGTTTATTGGGGGCACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGAATTGGTTCCCATTTTGAAACAAGCCGGCGCTTTGTGGCTTTGA

Coding sequence (CDS)

ATGCACCAAGCAATTCCTTACCGGTCATGGCAATCAATTGACACAAAACAGGGCACATTATCAATGAGATCAGCATGGGGGGGTGGATCAGCGTCTGCGACGGCGGAAGGTGGGGGATCCAGAAGCGATGTGATTGCGTCAGTATCGGAGAATGCGGCGATAGTGTTTGCTAGAAGAGGGTGCTGTATGAGCCATGTGGTGAAGCGGCTTCTTCTGGGGTTGGGTGCTAATCCGGCGGTGTACGAGGTGGAGGAAGAACAAGAATCCGGCGTCCTGAAGGAATTGGAGGCCTTCGCCAAATCTCCCAACGCCGAGATACAGTTGCCGGCGGTGTTTATTGGGGGCACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGAATTGGTTCCCATTTTGAAACAAGCCGGCGCTTTGTGGCTTTGA

Protein sequence

MHQAIPYRSWQSIDTKQGTLSMRSAWGGGSASATAEGGGSRSDVIASVSENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGGLDRVMATHISGELVPILKQAGALWL

Homology

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BLAST of CmaCh20G005780 vs. Swiss-Prot
Match: GRXC9_ARATH (Glutaredoxin-C9 OS=Arabidopsis thaliana GN=GRXC9 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.0e-32
Identity = 72/115 (62.61%), Postives = 85/115 (73.91%), Query Frame = 1


Query: 32  SATAEGGGSRSDVIASVSENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGV 91
           S   +G G R  ++  V ENA IV  RRGCCM HVV+RLLLGLG NPAV E++EE+E  V
Sbjct: 25  SLKTQGNGERVRMV--VEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEV 84

Query: 92  LKELEAF-AKSPNAEIQLPAVFIGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           L ELE    +     ++LPAV++GG LFGGLDRVMATHISGELVPILK+ GALWL
Sbjct: 85  LSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137

[Close]

BLAST of CmaCh20G005780 vs. Swiss-Prot
Match: GRXS9_ORYSJ (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-26
Identity = 74/153 (48.37%), Postives = 89/153 (58.17%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSAWGGGSASATAEGG-------GSRSDVIASVSENAA 60
           M+QAIPY +               AW   S  ATA          G   +V  +V+E   
Sbjct: 1   MYQAIPYNA-------------NRAWPAASRPATAAAAPPPPPPRGEEEEVRRAVAECPV 60

Query: 61  IVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQE-SGVLKELEAFAKSPNAEIQLPAVF 120
           +V  R GCC+SHVVKRLL GLG NPAV+EV  E E +GV+        +    + LPAVF
Sbjct: 61  VVVGRSGCCLSHVVKRLLQGLGVNPAVHEVAGEAELAGVV--------AGGGGVALPAVF 120

Query: 121 IGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           +GG L GGLDR+MA HISGELVPILK+AGALWL
Sbjct: 121 VGGRLLGGLDRLMAVHISGELVPILKEAGALWL 132

[Close]

BLAST of CmaCh20G005780 vs. Swiss-Prot
Match: GRXS5_ORYSJ (Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica GN=GRXS5 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-25
Identity = 71/153 (46.41%), Postives = 89/153 (58.17%), Query Frame = 1


Query: 1   MHQAIPY---RSWQSIDTKQGTLSM-----RSAWGGGSASATAEGGGSRSDVIASVSENA 60
           M+QAIPY   R W   +     + +      +A  G    A   G    ++V  +V+E+ 
Sbjct: 1   MYQAIPYSSTRPWLRPEPAASVVDVVKVETTTAVAGRGGEAEVVGEEEAAEVRRAVAESP 60

Query: 61  AIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVF 120
            +V  RRGCC+ HVVKRLL GLG NPAV+EV  E        L+    +      LPAVF
Sbjct: 61  VLVVGRRGCCLIHVVKRLLQGLGVNPAVHEVAGEAA------LKGVVPAGGEAAALPAVF 120

Query: 121 IGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           +GG L GGLDR+MA HISGELVPILK+AGALWL
Sbjct: 121 VGGKLLGGLDRLMAVHISGELVPILKKAGALWL 147

[Close]

BLAST of CmaCh20G005780 vs. Swiss-Prot
Match: GRXS3_ORYSJ (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica GN=GRXS3 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.4e-23
Identity = 63/134 (47.01%), Postives = 79/134 (58.96%), Query Frame = 1


Query: 27  GGGSASATAEGGGSRS-DVIASVSENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEE 86
           G  SA+A A        +V  +V E   +V  RRGCCM+HV +RLLLG GANPAV EV +
Sbjct: 3   GARSAAAMAAAAADEEREVRRAVEEKPVVVVGRRGCCMAHVARRLLLGQGANPAVLEVGD 62

Query: 87  EQESGVLKELEAFAK--------------SPNAEIQLPAVFIGGTLFGGLDRVMATHISG 146
           + +   L +    A+                 A +  PAVFIGG L GGLDR+MA H++G
Sbjct: 63  DADPAALVDAALQARRRKDGGDKAAAGDGGGGAAVAFPAVFIGGRLVGGLDRLMAMHMAG 122

[Close]

BLAST of CmaCh20G005780 vs. Swiss-Prot
Match: GRXC9_ORYSJ (Glutaredoxin-C9 OS=Oryza sativa subsp. japonica GN=GRXC9 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.2e-22
Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 1


Query: 44  VIASVSENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKS-- 103
           V    S NA +VF+  GCCM HVVKRLLLGLG  PAVYE+++   +    +++A      
Sbjct: 92  VARMASGNAVVVFSASGCCMCHVVKRLLLGLGVGPAVYELDQLAAAA---DIQAALSQLL 151

Query: 104 PNAEIQLPAVFIGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           P  +  +P VF+GG L GG+++VMA HI+G LVP+LKQAGALWL
Sbjct: 152 PPGQPPVPVVFVGGRLLGGVEKVMACHINGTLVPLLKQAGALWL 192

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BLAST of CmaCh20G005780 vs. TrEMBL
Match: U3RBI7_CUCSA (Glutaredoxin OS=Cucumis sativus GN=GRX6 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.4e-62
Identity = 127/150 (84.67%), Postives = 134/150 (89.33%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSAW-----GGGSASATAEGGGSRSDVIASVSENAAIV 60
           MHQAIPYRSWQSIDTKQ TLSMR  W     GG +AS  +EGGG R DV+ASVSE+AAIV
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60

Query: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGG 120
           FARRGCCMSHVVKRLLLGLGANPAVYEV+EEQESGVLKELEAFAKS N  +QLPAVFIGG
Sbjct: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGG 120

Query: 121 TLFGGLDRVMATHISGELVPILKQAGALWL 146
           TLFGGLDRVMATHISG+LVPILKQAGALWL
Sbjct: 121 TLFGGLDRVMATHISGDLVPILKQAGALWL 150

[Close]

BLAST of CmaCh20G005780 vs. TrEMBL
Match: A0A0A0LT46_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G412500 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.0e-50
Identity = 107/129 (82.95%), Postives = 114/129 (88.37%), Query Frame = 1


Query: 22  MRSAW-----GGGSASATAEGGGSRSDVIASVSENAAIVFARRGCCMSHVVKRLLLGLGA 81
           MR  W     GG +AS  +EGGG R DV+ASVSE+AAIVFARRGCCMSHVVKRLLLGLGA
Sbjct: 1   MRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGA 60

Query: 82  NPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGGLDRVMATHISGELVPI 141
           NPAVYEV+EEQESGVLKELEAFAKS N  +QLPAVFIGGTLFGGLDRVMATHISG+LVPI
Sbjct: 61  NPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPI 120

Query: 142 LKQAGALWL 146
           LKQAGALWL
Sbjct: 121 LKQAGALWL 129

[Close]

BLAST of CmaCh20G005780 vs. TrEMBL
Match: A0A061E5A7_THECC (Glutaredoxin, putative OS=Theobroma cacao GN=TCM_008240 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-36
Identity = 88/147 (59.86%), Postives = 103/147 (70.07%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSAWGGGSASATAEGGGSRSDVIASVSENAAIVFARRG 60
           M QAIPY+SW        T S R+    G  +     GG   DV+  V ENA IVFAR+G
Sbjct: 1   MQQAIPYKSWPLPCAT--TTSHRAPSTLGHNNLVLSRGGGSKDVLNIVLENAVIVFARKG 60

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAK--SPNAEIQLPAVFIGGTLF 120
           CCMSHVV+RLLL LG NPAVYE++++ E GVL ELE   K    + ++QLPAVFIGG LF
Sbjct: 61  CCMSHVVRRLLLALGVNPAVYEIDDKDEVGVLNELEMICKGDGKDKKVQLPAVFIGGRLF 120

Query: 121 GGLDRVMATHISGELVPILKQAGALWL 146
           GGLD+VMATHISGELVP+LK AGALWL
Sbjct: 121 GGLDKVMATHISGELVPVLKDAGALWL 145

[Close]

BLAST of CmaCh20G005780 vs. TrEMBL
Match: A0A0S3SB60_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G124900 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-35
Identity = 86/147 (58.50%), Postives = 103/147 (70.07%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQGTLS--MRSAWGGGSASATAEGGGSRSDVIASVSENAAIVFAR 60
           M +AIPYRSWQ + +   T +  + S     + ++      S   V   V ENA IVFAR
Sbjct: 1   MQEAIPYRSWQPLISSSPTTTHFISSINNTNNTNSITPSFASTKMVPNMVLENAVIVFAR 60

Query: 61  RGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLF 120
           RGCCMSHVV+RLLLGLG NPA++EVEE+ E GV++ELEA        +Q PAVFIGG LF
Sbjct: 61  RGCCMSHVVQRLLLGLGVNPAMHEVEEKDEVGVVRELEAIVGGNENNMQFPAVFIGGKLF 120

Query: 121 GGLDRVMATHISGELVPILKQAGALWL 146
           GGLDR+MATHISGELVPILK+A ALWL
Sbjct: 121 GGLDRLMATHISGELVPILKEARALWL 147

[Close]

BLAST of CmaCh20G005780 vs. TrEMBL
Match: A0A0L9V520_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g101700 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-35
Identity = 86/147 (58.50%), Postives = 103/147 (70.07%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQGTLS--MRSAWGGGSASATAEGGGSRSDVIASVSENAAIVFAR 60
           M +AIPYRSWQ + +   T +  + S     + ++      S   V   V ENA IVFAR
Sbjct: 1   MQEAIPYRSWQPLISSSPTTTHFISSINNTNNTNSITPSFASTKMVPNMVLENAVIVFAR 60

Query: 61  RGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLF 120
           RGCCMSHVV+RLLLGLG NPA++EVEE+ E GV++ELEA        +Q PAVFIGG LF
Sbjct: 61  RGCCMSHVVQRLLLGLGVNPAMHEVEEKDEVGVVRELEAIVGGNENNMQFPAVFIGGKLF 120

Query: 121 GGLDRVMATHISGELVPILKQAGALWL 146
           GGLDR+MATHISGELVPILK+A ALWL
Sbjct: 121 GGLDRLMATHISGELVPILKEARALWL 147

[Close]

BLAST of CmaCh20G005780 vs. TAIR10
Match: AT1G28480.1 (AT1G28480.1 Thioredoxin superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 1.7e-33
Identity = 72/115 (62.61%), Postives = 85/115 (73.91%), Query Frame = 1


Query: 32  SATAEGGGSRSDVIASVSENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGV 91
           S   +G G R  ++  V ENA IV  RRGCCM HVV+RLLLGLG NPAV E++EE+E  V
Sbjct: 25  SLKTQGNGERVRMV--VEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEV 84

Query: 92  LKELEAF-AKSPNAEIQLPAVFIGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           L ELE    +     ++LPAV++GG LFGGLDRVMATHISGELVPILK+ GALWL
Sbjct: 85  LSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137

[Close]

BLAST of CmaCh20G005780 vs. TAIR10
Match: AT4G15700.1 (AT4G15700.1 Thioredoxin superfamily protein)

HSP 1 Score: 95.5 bits (236), Expect = 2.8e-20
Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 1


Query: 48  VSENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQ 107
           +SE + ++F++  CCMSH +K L L LG NP +YE++E       KE+E           
Sbjct: 8   ISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRG---KEIEHALAQLGCSPT 67

Query: 108 LPAVFIGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           +P VFIGG L GG ++VM+ H++  LVP+LK+AGALWL
Sbjct: 68  VPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of CmaCh20G005780 vs. TAIR10
Match: AT5G14070.1 (AT5G14070.1 Thioredoxin superfamily protein)

HSP 1 Score: 94.0 bits (232), Expect = 8.3e-20
Identity = 46/102 (45.10%), Postives = 66/102 (64.71%), Query Frame = 1


Query: 49  SENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVE-----EEQESGVLKELEAFAKSPN 108
           +ENA ++F+   CCM H +KRL  G+G +PAV+E++      E    +L+ L   +    
Sbjct: 39  AENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLLGCSSGGAT 98

Query: 109 AEIQLPAVFIGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           +   LP VFIGG + G ++RVMA+HI+G LVP+LK AGALWL
Sbjct: 99  SPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of CmaCh20G005780 vs. TAIR10
Match: AT4G15690.1 (AT4G15690.1 Thioredoxin superfamily protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19
Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 1


Query: 48  VSENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQ 107
           +SE + ++F++  CCMSH +K L L  G NP +YE++E     + +E+E           
Sbjct: 8   ISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDE---INIGREIEQALAQLGCSPT 67

Query: 108 LPAVFIGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           +P VFIGG L GG ++VM+ H++  LVP+LK+AGALWL
Sbjct: 68  VPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of CmaCh20G005780 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 92.8 bits (229), Expect = 1.8e-19
Identity = 43/98 (43.88%), Postives = 62/98 (63.27%), Query Frame = 1


Query: 48  VSENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQ 107
           V E   +++++  CCMSH +K LL   GANPAVYE++E       +E+E           
Sbjct: 8   VMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRG---REIEQALLRLGCSPA 67

Query: 108 LPAVFIGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
           +P VFIGG L GG + VM+ H++G L+P+LK+AGALW+
Sbjct: 68  VPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of CmaCh20G005780 vs. NCBI nr
Match: gi|564112188|ref|NP_001274138.1| (glutaredoxin-C9-like [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 4.8e-62
Identity = 127/150 (84.67%), Postives = 134/150 (89.33%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSAW-----GGGSASATAEGGGSRSDVIASVSENAAIV 60
           MHQAIPYRSWQSIDTKQ TLSMR  W     GG +AS  +EGGG R DV+ASVSE+AAIV
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60

Query: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGG 120
           FARRGCCMSHVVKRLLLGLGANPAVYEV+EEQESGVLKELEAFAKS N  +QLPAVFIGG
Sbjct: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGG 120

Query: 121 TLFGGLDRVMATHISGELVPILKQAGALWL 146
           TLFGGLDRVMATHISG+LVPILKQAGALWL
Sbjct: 121 TLFGGLDRVMATHISGDLVPILKQAGALWL 150

[Close]

BLAST of CmaCh20G005780 vs. NCBI nr
Match: gi|659111862|ref|XP_008455946.1| (PREDICTED: glutaredoxin-C9-like [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 1.1e-61
Identity = 126/148 (85.14%), Postives = 133/148 (89.86%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQGTLSMRSAWGG---GSASATAEGGGSRSDVIASVSENAAIVFA 60
           MHQAIPYRSWQSIDTKQ TL+MR  W G   GSAS  +EGGG R DV+ASVSE+AAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEV+EE ESGVLKELEAFAKS N  +QLPAVFIGGTL
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGELVPILKQAGALWL 146
           FGGLDRVMATHISG+LVPILKQAGALWL
Sbjct: 121 FGGLDRVMATHISGDLVPILKQAGALWL 148

[Close]

BLAST of CmaCh20G005780 vs. NCBI nr
Match: gi|700208087|gb|KGN63206.1| (hypothetical protein Csa_2G412500 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 7.2e-50
Identity = 107/129 (82.95%), Postives = 114/129 (88.37%), Query Frame = 1


Query: 22  MRSAW-----GGGSASATAEGGGSRSDVIASVSENAAIVFARRGCCMSHVVKRLLLGLGA 81
           MR  W     GG +AS  +EGGG R DV+ASVSE+AAIVFARRGCCMSHVVKRLLLGLGA
Sbjct: 1   MRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGA 60

Query: 82  NPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGGLDRVMATHISGELVPI 141
           NPAVYEV+EEQESGVLKELEAFAKS N  +QLPAVFIGGTLFGGLDRVMATHISG+LVPI
Sbjct: 61  NPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPI 120

Query: 142 LKQAGALWL 146
           LKQAGALWL
Sbjct: 121 LKQAGALWL 129

[Close]

BLAST of CmaCh20G005780 vs. NCBI nr
Match: gi|502143974|ref|XP_004505534.1| (PREDICTED: glutaredoxin-C9-like [Cicer arietinum])

HSP 1 Score: 164.5 bits (415), Expect = 1.4e-37
Identity = 88/151 (58.28%), Postives = 106/151 (70.20%), Query Frame = 1


Query: 1   MHQAIPYRSWQSIDTKQ------GTLSMRSAWGGGSASATAEGGGSRSDVIASVSENAAI 60
           M QAIPYRSW    T         TL+          S+       R+ V++ VS+NA I
Sbjct: 1   MQQAIPYRSWTHTSTTHFNVINPHTLTKNKIHNTIDESSHKPSSLERTMVVSMVSDNAII 60

Query: 61  VFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIG 120
           VFAR+GCCMSHVVKRLLLGLG NPA++EVEE+ E  +++ELE+   S + ++Q PAVFIG
Sbjct: 61  VFARQGCCMSHVVKRLLLGLGVNPAIHEVEEKDEVDMVRELESIIASDDGKVQFPAVFIG 120

Query: 121 GTLFGGLDRVMATHISGELVPILKQAGALWL 146
           G LFGGLDR+MATHISGELVPILKQAGALWL
Sbjct: 121 GKLFGGLDRIMATHISGELVPILKQAGALWL 151

[Close]

BLAST of CmaCh20G005780 vs. NCBI nr
Match: gi|1021561819|ref|XP_016172104.1| (PREDICTED: glutaredoxin-C9-like [Arachis ipaensis])

HSP 1 Score: 164.1 bits (414), Expect = 1.8e-37
Identity = 100/169 (59.17%), Postives = 107/169 (63.31%), Query Frame = 1


Query: 1   MHQAIPYRSW--------------QSIDT------KQGTLSMRSAWGGGSASATAEGGGS 60
           MHQAIPYRSW              Q ID       K  TLS   +     AS  +E    
Sbjct: 1   MHQAIPYRSWTTHFTPQPLNIIHSQPIDNNNDNNNKNNTLSFLFSPKKDLASKDSE---- 60

Query: 61  RSDVIASVSENAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAF-- 120
              V   VSENA IVF RRGCCMSHVVKRLLLGLG NPAVYEVEE+ E GV +ELEA   
Sbjct: 61  -KMVHDMVSENAVIVFGRRGCCMSHVVKRLLLGLGVNPAVYEVEEKDEEGVARELEAIGG 120

Query: 121 --AKSPNAEIQLPAVFIGGTLFGGLDRVMATHISGELVPILKQAGALWL 146
                 N ++Q PAVFIGG LFGGLDR+MATHISGELVPILKQAGALWL
Sbjct: 121 GVGDGDNNKVQFPAVFIGGKLFGGLDRIMATHISGELVPILKQAGALWL 164

The following BLAST results are available for this feature:

BLAST of CmaCh20G005780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRXC9_ARATH	3.0e-32	62.61	Glutaredoxin-C9 OS=Arabidopsis thaliana GN=GRXC9 PE=1 SV=1	[more]
GRXS9_ORYSJ	2.5e-26	48.37	Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica GN=GRXS9 PE=3 SV=1	[more]
GRXS5_ORYSJ	1.6e-25	46.41	Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica GN=GRXS5 PE=2 SV=1	[more]
GRXS3_ORYSJ	4.4e-23	47.01	Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica GN=GRXS3 PE=2 SV=1	[more]
GRXC9_ORYSJ	2.2e-22	51.92	Glutaredoxin-C9 OS=Oryza sativa subsp. japonica GN=GRXC9 PE=3 SV=1	[more]

BLAST of CmaCh20G005780 vs. TrEMBL


Match Name	E-value	Identity	Description
U3RBI7_CUCSA	3.4e-62	84.67	Glutaredoxin OS=Cucumis sativus GN=GRX6 PE=2 SV=1	[more]
A0A0A0LT46_CUCSA	5.0e-50	82.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G412500 PE=4 SV=1	[more]
A0A061E5A7_THECC	1.1e-36	59.86	Glutaredoxin, putative OS=Theobroma cacao GN=TCM_008240 PE=4 SV=1	[more]
A0A0S3SB60_PHAAN	1.6e-35	58.50	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G124900 PE=...	[more]
A0A0L9V520_PHAAN	1.6e-35	58.50	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g101700 PE=4 SV=1	[more]

BLAST of CmaCh20G005780 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G28480.1	1.7e-33	62.61	Thioredoxin superfamily protein	[more]
AT4G15700.1	2.8e-20	44.90	Thioredoxin superfamily protein	[more]
AT5G14070.1	8.3e-20	45.10	Thioredoxin superfamily protein	[more]
AT4G15690.1	1.1e-19	42.86	Thioredoxin superfamily protein	[more]
AT5G18600.1	1.8e-19	43.88	Thioredoxin superfamily protein	[more]

BLAST of CmaCh20G005780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|564112188\|ref\|NP_001274138.1\|	4.8e-62	84.67	glutaredoxin-C9-like [Cucumis sativus]	[more]
gi\|659111862\|ref\|XP_008455946.1\|	1.1e-61	85.14	PREDICTED: glutaredoxin-C9-like [Cucumis melo]	[more]
gi\|700208087\|gb\|KGN63206.1\|	7.2e-50	82.95	hypothetical protein Csa_2G412500 [Cucumis sativus]	[more]
gi\|502143974\|ref\|XP_004505534.1\|	1.4e-37	58.28	PREDICTED: glutaredoxin-C9-like [Cicer arietinum]	[more]
gi\|1021561819\|ref\|XP_016172104.1\|	1.8e-37	59.17	PREDICTED: glutaredoxin-C9-like [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002109	Glutaredoxin
IPR011905	GlrX-like_pln_2
IPR012336	Thioredoxin-like_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0022900	electron transport chain
biological_process	GO:0008150	biological_process
cellular_component	GO:0005623	cell
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G005780.1	CmaCh20G005780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 54..117 score: 6.
IPR002109	Glutaredoxin	PROFILE	PS51354	GLUTAREDOXIN_2	coord: 41..144 score: 19
IPR011905	Glutaredoxin-like, plant II	TIGRFAMs	TIGR02189	TIGR02189	coord: 47..145 score: 1.3
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 48..142 score: 3.7
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 47..144 score: 9.25
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 44..145 score: 9.4
None	No IPR available	PANTHER	PTHR10168:SF111	MONOTHIOL GLUTAREDOXIN-S13	coord: 44..145 score: 9.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh20G005780	Cucsa.046550	Cucumber (Gy14) v1	cgycmaB0042
CmaCh20G005780	Cucsa.087450	Cucumber (Gy14) v1	cgycmaB0169
CmaCh20G005780	Cla009650	Watermelon (97103) v1	cmawmB521
CmaCh20G005780	MELO3C019326	Melon (DHL92) v3.5.1	cmameB502
CmaCh20G005780	ClCG01G023330	Watermelon (Charleston Gray)	cmawcgB480
CmaCh20G005780	ClCG02G010280	Watermelon (Charleston Gray)	cmawcgB501
CmaCh20G005780	CSPI02G25960	Wild cucumber (PI 183967)	cmacpiB545
CmaCh20G005780	CSPI06G34980	Wild cucumber (PI 183967)	cmacpiB567
CmaCh20G005780	CmoCh02G002010	Cucurbita moschata (Rifu)	cmacmoB561
CmaCh20G005780	CmoCh20G006540	Cucurbita moschata (Rifu)	cmacmoB552
CmaCh20G005780	Lsi10G000840	Bottle gourd (USVL1VR-Ls)	cmalsiB501
CmaCh20G005780	Cp4.1LG05g14110	Cucurbita pepo (Zucchini)	cmacpeB578
CmaCh20G005780	MELO3C007253.2	Melon (DHL92) v3.6.1	cmamedB602
CmaCh20G005780	MELO3C019326.2	Melon (DHL92) v3.6.1	cmamedB579
CmaCh20G005780	CsaV3_2G034500	Cucumber (Chinese Long) v3	cmacucB0650
CmaCh20G005780	Cla97C02G036310	Watermelon (97103) v2	cmawmbB589
CmaCh20G005780	Bhi10G001065	Wax gourd	cmawgoB0685
CmaCh20G005780	CsGy6G034500	Cucumber (Gy14) v2	cgybcmaB797
CmaCh20G005780	CsGy2G025590	Cucumber (Gy14) v2	cgybcmaB217
CmaCh20G005780	Carg05124	Silver-seed gourd	carcmaB1123
CmaCh20G005780	Carg03108	Silver-seed gourd	carcmaB0472

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh20G005780	Cucumber (Chinese Long) v3	cmacucB0674
CmaCh20G005780	Cucumber (Chinese Long) v3	cmacucB0684
CmaCh20G005780	Watermelon (97103) v2	cmawmbB575
CmaCh20G005780	Watermelon (97103) v2	cmawmbB582
CmaCh20G005780	Cucurbita maxima (Rimu)	cmacmaB157
CmaCh20G005780	Cucurbita maxima (Rimu)	cmacmaB443
CmaCh20G005780	Cucurbita maxima (Rimu)	cmacmaB477
CmaCh20G005780	Cucurbita moschata (Rifu)	cmacmoB540
CmaCh20G005780	Cucurbita moschata (Rifu)	cmacmoB547
CmaCh20G005780	Wild cucumber (PI 183967)	cmacpiB576
CmaCh20G005780	Cucumber (Chinese Long) v2	cmacuB539
CmaCh20G005780	Cucumber (Chinese Long) v2	cmacuB569
CmaCh20G005780	Melon (DHL92) v3.5.1	cmameB513
CmaCh20G005780	Watermelon (Charleston Gray)	cmawcgB494
CmaCh20G005780	Watermelon (97103) v1	cmawmB543
CmaCh20G005780	Cucurbita pepo (Zucchini)	cmacpeB559
CmaCh20G005780	Cucurbita pepo (Zucchini)	cmacpeB562
CmaCh20G005780	Cucurbita pepo (Zucchini)	cmacpeB574
CmaCh20G005780	Bottle gourd (USVL1VR-Ls)	cmalsiB513
CmaCh20G005780	Cucumber (Gy14) v2	cgybcmaB953
CmaCh20G005780	Melon (DHL92) v3.6.1	cmamedB590