Cucsa.087450 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATTTACTCCAAACGACACCTGTACTCTTTACAAATCTACAATCATGCACCAAGCAATCCCTTACCGATCATGGCAATCAATTGACACAAAaCAAACCACATTATCAATGAGACCACCATGGGCCGCCACCGTCGTCGGTGGATCAGCAGCGTCCATGCCCTCCGAGGGTGGAGGAAGAAGAAGGGACGTCGTTGCGTCAGTTTCCGAGAGTGCGGCGATAGTGTTTGCTAGAAGAGGATGCTGTATGAGCCATGTGGTAAAGCGTCTTCTATTAGGACTGGGAGCCAATCCGGCGGTGTATGAAGTGGATGAAGAACAAGAATCTGGAGTGCTCAAGGAATTGGAGGCTTTTGCTAAATCTTCTAATGTTAATTTGCAATTGCCGGCTGTCTTTATCGGAGGCACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAGGCTGGAGCCTTGTGGCTTTAATTTTCCTTTTTtCTTTATATCAATCCTCAATCCTCAATCCTCAATCCTCAATCCTCAATCCTCAATTTTCGTTTtATTATTTTTtCCTTCTATCAAACAGGgATGTTTTTTGTTGCTATCACTTTTGGTTGTGGCATCTGTTTTCCTGTTTGTCAATGAGGGGATTTTTTTTtCTTGTTAGAGTTCGTAAATGGAATCCTCAACTATTGATGAAAATATTTGTTAATACTACATATATCAAATTGGTTTTTTTTTtttCCTTtCTTTtCTTGTTTTAATTTGTTTGTGCAGTCTTGTCATGAAGTCAATGTTTCTCGCATATTAAAAAaGGTAAGCTTATTGTAGAGGAAGATTAATCTAATTTGGAAA CAATTTACTCCAAACGACACCTGTACTCTTTACAAATCTACAATCATGCACCAAGCAATCCCTTACCGATCATGGCAATCAATTGACACAAAACAAACCACATTATCAATGAGACCACCATGGGCCGCCACCGTCGTCGGTGGATCAGCAGCGTCCATGCCCTCCGAGGGTGGAGGAAGAAGAAGGGACGTCGTTGCGTCAGTTTCCGAGAGTGCGGCGATAGTGTTTGCTAGAAGAGGATGCTGTATGAGCCATGTGGTAAAGCGTCTTCTATTAGGACTGGGAGCCAATCCGGCGGTGTATGAAGTGGATGAAGAACAAGAATCTGGAGTGCTCAAGGAATTGGAGGCTTTTGCTAAATCTTCTAATGTTAATTTGCAATTGCCGGCTGTCTTTATCGGAGGCACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAGGCTGGAGCCTTGTGGCTTTAATTTTCCTTTTTTCTTTATATCAATCCTCAATCCTCAATCCTCAATCCTCAATCCTCAATCCTCAATTTTCGTTTTATTATTTTTTCCTTCTATCAAACAGGGATGTTTTTTGTTGCTATCACTTTTGGTTGTGGCATCTGTTTTCCTGTTTGTCAATGAGGGGATTTTTTTTTCTTGTTAGAGTTCGTAAATGGAATCCTCAACTATTGATGAAAATATTTGTTAATACTACATATATCAAATTGGTTTTTTTTTTTTCCTTTCTTTTCTTGTTTTAATTTGTTTGTGCAGTCTTGTCATGAAGTCAATGTTTCTCGCATATTAAAAAAGGTAAGCTTATTGTAGAGGAAGATTAATCTAATTTGGAAA ATGCACCAAGCAATCCCTTACCGATCATGGCAATCAATTGACACAAAaCAAACCACATTATCAATGAGACCACCATGGGCCGCCACCGTCGTCGGTGGATCAGCAGCGTCCATGCCCTCCGAGGGTGGAGGAAGAAGAAGGGACGTCGTTGCGTCAGTTTCCGAGAGTGCGGCGATAGTGTTTGCTAGAAGAGGATGCTGTATGAGCCATGTGGTAAAGCGTCTTCTATTAGGACTGGGAGCCAATCCGGCGGTGTATGAAGTGGATGAAGAACAAGAATCTGGAGTGCTCAAGGAATTGGAGGCTTTTGCTAAATCTTCTAATGTTAATTTGCAATTGCCGGCTGTCTTTATCGGAGGCACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAGGCTGGAGCCTTGTGGCTTTAA MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPILKQAGALWL*
BLAST of Cucsa.087450 vs. Swiss-Prot
Match: GRXC9_ARATH (Glutaredoxin-C9 OS=Arabidopsis thaliana GN=GRXC9 PE=1 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 8.4e-33 Identity = 76/125 (60.80%), Postives = 91/125 (72.80%), Query Frame = 1
BLAST of Cucsa.087450 vs. Swiss-Prot
Match: GRXS9_ORYSJ (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica GN=GRXS9 PE=3 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 8.1e-28 Identity = 76/154 (49.35%), Postives = 94/154 (61.04%), Query Frame = 1
BLAST of Cucsa.087450 vs. Swiss-Prot
Match: GRXS5_ORYSJ (Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica GN=GRXS5 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27 Identity = 71/153 (46.41%), Postives = 88/153 (57.52%), Query Frame = 1
BLAST of Cucsa.087450 vs. Swiss-Prot
Match: GRXS3_ORYSJ (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica GN=GRXS3 PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.9e-25 Identity = 61/131 (46.56%), Postives = 79/131 (60.31%), Query Frame = 1
BLAST of Cucsa.087450 vs. Swiss-Prot
Match: GRS13_ARATH (Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana GN=GRXS13 PE=2 SV=2) HSP 1 Score: 104.8 bits (260), Expect = 8.7e-22 Identity = 53/101 (52.48%), Postives = 68/101 (67.33%), Query Frame = 1
BLAST of Cucsa.087450 vs. TrEMBL
Match: U3RBI7_CUCSA (Glutaredoxin OS=Cucumis sativus GN=GRX6 PE=2 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 4.6e-78 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1
BLAST of Cucsa.087450 vs. TrEMBL
Match: A0A0A0LT46_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G412500 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 4.4e-65 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1
BLAST of Cucsa.087450 vs. TrEMBL
Match: G7JUX5_MEDTR (Glutaredoxin-C1 protein OS=Medicago truncatula GN=MTR_4g079110 PE=2 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 3.0e-37 Identity = 92/158 (58.23%), Postives = 106/158 (67.09%), Query Frame = 1
BLAST of Cucsa.087450 vs. TrEMBL
Match: A0A061E5A7_THECC (Glutaredoxin, putative OS=Theobroma cacao GN=TCM_008240 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 5.1e-37 Identity = 91/152 (59.87%), Postives = 106/152 (69.74%), Query Frame = 1
BLAST of Cucsa.087450 vs. TrEMBL
Match: A0A0D2NFU0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G198800 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 8.7e-37 Identity = 88/152 (57.89%), Postives = 106/152 (69.74%), Query Frame = 1
BLAST of Cucsa.087450 vs. TAIR10
Match: AT1G28480.1 (AT1G28480.1 Thioredoxin superfamily protein) HSP 1 Score: 141.4 bits (355), Expect = 4.7e-34 Identity = 76/125 (60.80%), Postives = 91/125 (72.80%), Query Frame = 1
BLAST of Cucsa.087450 vs. TAIR10
Match: AT4G15700.1 (AT4G15700.1 Thioredoxin superfamily protein) HSP 1 Score: 97.4 bits (241), Expect = 7.8e-21 Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 1
BLAST of Cucsa.087450 vs. TAIR10
Match: AT3G02000.1 (AT3G02000.1 Thioredoxin superfamily protein) HSP 1 Score: 95.9 bits (237), Expect = 2.3e-20 Identity = 57/124 (45.97%), Postives = 75/124 (60.48%), Query Frame = 1
BLAST of Cucsa.087450 vs. TAIR10
Match: AT4G15690.1 (AT4G15690.1 Thioredoxin superfamily protein) HSP 1 Score: 95.1 bits (235), Expect = 3.9e-20 Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = 1
BLAST of Cucsa.087450 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein) HSP 1 Score: 94.7 bits (234), Expect = 5.1e-20 Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 1
BLAST of Cucsa.087450 vs. NCBI nr
Match: gi|564112188|ref|NP_001274138.1| (glutaredoxin-C9-like [Cucumis sativus]) HSP 1 Score: 298.5 bits (763), Expect = 6.5e-78 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1
BLAST of Cucsa.087450 vs. NCBI nr
Match: gi|659111862|ref|XP_008455946.1| (PREDICTED: glutaredoxin-C9-like [Cucumis melo]) HSP 1 Score: 280.8 bits (717), Expect = 1.4e-72 Identity = 142/150 (94.67%), Postives = 145/150 (96.67%), Query Frame = 1
BLAST of Cucsa.087450 vs. NCBI nr
Match: gi|700208087|gb|KGN63206.1| (hypothetical protein Csa_2G412500 [Cucumis sativus]) HSP 1 Score: 255.4 bits (651), Expect = 6.3e-65 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1
BLAST of Cucsa.087450 vs. NCBI nr
Match: gi|357474467|ref|XP_003607518.1| (glutaredoxin-C1 protein [Medicago truncatula]) HSP 1 Score: 162.9 bits (411), Expect = 4.3e-37 Identity = 92/158 (58.23%), Postives = 106/158 (67.09%), Query Frame = 1
BLAST of Cucsa.087450 vs. NCBI nr
Match: gi|590691177|ref|XP_007043710.1| (Glutaredoxin, putative [Theobroma cacao]) HSP 1 Score: 162.2 bits (409), Expect = 7.3e-37 Identity = 91/152 (59.87%), Postives = 106/152 (69.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |