Cucsa.059120 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCGCGGCTGCCGCACGTTTCCTTGTAGTCGTCGTCGAACATACAATCCGGTTGCCATCAATCCACTCGCGTCGCTTTGGTCCTGCTCATCGTCGCAGGTCACCTTATCGTCGTTTTTTTTtCCTGAGGTAAGCTTAAAACATGGTTGAAATTTTtGTTTTTACTTTAATAAAGCGTGAAATGAATACTATGCGTACAAACAACAACATAAATGAAGTTTTGAGATGTGGGTATTTCAAGCTTTATTATGTTCATTAAGAATCTTCAATTTCACTAACTTTACTTTTAATTCTCTAATTTCAGTTTTAATTTCAATAGTTTTCTTGATCTTCTTGAAGTTTTATTTATTTATTTATTTTTCTATGTATTGATTTGGGGTTAAAGAATTTAGGGTTGGTGTATTTTTTAGGTGTCAAATGCAAATTATCTATGTGAGTCTGTAATTGGTTCATTTTATATACATTTGGACTATTTTCAACTCTAGTAAACAATGCACTACTACTGGGAAACTTATTGGAAAAAATCTATAGAAACTTTTTAGGTTGTTAATCAAAGTGAATGTCATGAACCATTTACTTCTTGCGTATTTTACAGGTTTTTTtGAAAGTTTTGATAGTTAAAGAGGCACTTAGATACTTCTTAGGTACTTTTTAAGTTGGTTTGAGGGTGAAATTGTTGTTGAAGTAATTTTGAGACTTGGAATGCTACTTTCACAAAAGCCCATGGGATGCTCGAATCCGAAGCAGCCACCTAGCAAATCCCTATCCCAAGTTGGAGTGCCCAAATCAAACCCTAGCCTGCCCGATTTCCTTCCATTCTTTTCCTCTATGTAGATCTTCCTACAGTTTCCCAGATTTTTATGAGGATCTATATTGTTCATCGTTAATGCCTTCACAATCTATTGGATGTGGCAGAAACCTTAAACCTGGTTCTTTGGTGAAGAGATCCTTTGTAATAACGGATGATTTCAGCTTTAGTTGAGATGTTAACCTTTATTACTTATTAGGACACTATTTTTGGTTTGTTTACCAGTAATTtTTTTTtATAATTTTGTTCACGGTTTAGTTTGTTTAAATTTCTTTTTGCTGTGTGATTTATCACAGCCAGCATAGCTCTTGATGGATCCGCCGGCCCATAATACTTCATTGCAGCGCCTCCAAAATGTGGAGAAGGTTGGAATTACTTTCAATATCACAAACGTTTTGTTTCTAGTTCTTTGCATGGTCTTTATTGCAGCACCATGTTGATATAATTTTTtGGCCAACTTTTGTGTTTCATTCCTGCAGAGAATTGTGAGGGTTTTGGAACTAGCAGGAGGAGTCATGGAAGAGCTTGCCAACCCTGCTGGTCCAAGAAAGGAATTTGTCAACAATCATTGCAGTGAGTTCATGCAATTCATCAAGGTGAGCCTTCTGTTCAGATAGGTTTAGTGCCTCGCGTTGGGCGTCTGTGTTTAATGACGTTTGTACTTATTCACTGGGTTTTATTCTTAAGCCTTTTATTTCTCAATAGGTTAGGATCTGTTCGGTTCCTTCTGTGCTGTCATGTTTGTATGTCAAACAGTTTTTCTGTTGCAATTGTTTATTTTTATTATTTTGGTTGACCCTACTTTCTTTCATCTTGTTCTCTCCATGAAAGTTCGGTTCCTTCAGGGAAGTCACTTTTGTATGTAAATTTGAAAGTTTAGGTTCTTCGATTCAATGATCCTTCGTCTTCTTTCTATTTTTCCCAAAGAAGTGTTCCATCATGGGTGAAGGGATTCCAAATTTTGGGCTCCCAAGCCATCTAAGGGTTTCTCTTGTAACACTTTTTtTTtCATATATTCTTTGCTCCCTTCCTCTCTGTTTGGGTGCGTTTGCATTCTCCTCTCTTTGGCCAGCTAAAACTTCTAATGATGTTGAAGTCTTTGTTTGACAAGTTTGATGGGAAAGTAAACACACAAGATCTTCTACAAAGACATTATCATTCACTCAATTGCAATAGTATATTTTTTGTTGTAAGGAGGATGACCATGAATATTTTTTAGTCTTTTTATTTTGTGTGTGTCCAGTCTAGCTTACACACATACCGACTAATCTTGCAAGACAACTTGTCTAACCCTACAGTATTTGGATACAGGAACAATAGGATTTCTGGAAGGTCTTGTGGAGTGTAGTTGGGGTATTTTTTtGCTACACCCCAACTAAATGTGTAGGATATTAAAACTTCAGTAGGTGACTACCATGGATTGAACCTATAGTCTCTTAGTCTTAGAAGCATCTTATGGCATAGTTGTTTTTGTTCATTTTGTGGGAATTCAGATAGAGGAACAATAGGATTTTTAGAGGGTCTAAAAGATCTGGAGATGATCCCTGTGTGGGTGTTTGTTCGCTTTAATTCCTCATTATGGGTGTTTGATATTCGAGCTTTTTGTAATCGCCAACATCATTTCATTCTTTTTGATTGAAATCCTTTCTTGTATTTGTGCTGAGGCTGTTTTCTTTTTtATTTGTTTTTGTGGTATGCCCTTTACCTCCATTCCTCTCAATAAAAGCTTGGTTTCTTATATAAAAaGGAAAAAGAAAATTTTATGGCAAGGCTTCATTGTATAATTGCATTATTCTAACAATTCAAGCATGTAATAGATTTTCTTTTTCATGGTAACCGTAACTTCACCAGAAATTATCATGGAAAGCTTACATTCAAGCAACTAATTTATAGAAATTTGAACTCTGATTAATTGTCATATTTAAAGAATGTTATTATAATAAATTTCATCCTATCAAAAGTTCAGAATCAGAGGAATCTAACAAAGGAGGAAGAGTGGAGGAGTAAGGTAGGTCTGCTCTCTCCTCTCTCCTCTCTCCTCTTTCTACTGGCTTATCCTTTGATTTTCTGTACCTTTCTGTGATTTCTCCGACATCTTCTTCAATCCTTGGCTTCACTTTTAGTCTTCTCTGGGGTTTCTTCAACTTAGTTCTTGCTCATGGAAGTAGCAAGTTGCAAAATACTTCATATGCACTTTTGCGTTTGGCTGGATAACGGCCACTTTCACGTGGAGGACGTGGAAGCTCAACGATCCCTATTCATCCCAGAAGCCCATCTGAATTGGTTCCTTGTAGCGATAGCAGAGTTAGTCCGAGGCTTGAAGGATCGGTTCTTTCTGAAATTTGGGGAGTTAGACCGTGGGAGAACGAAGATCTCAAATTTCAGATTTGAAATTGGCGGGGTTTTATGTTGCGATTTTTGGCCGGCTTCAGGTGGGCGTTCAACCATCAAGGTTTCTTCAAAGGAAGACAAAGAGGGGTGGTCGTTCTTCCTCTAGATGTGGGAACAGTTTATCAAACTTGGAGAATAAGAAATGGTTCTCAAGTCATCGGCTTCCAACTAAACTCCCTTCGCAGTTCCAGAGATTGTCTAATGCTGATGGAGTTAAGACCGGATTTTTTTTtAGCTAATGAGCAGAAGTTAGGAAACCCAAGCTATAACAAAGGTAAGCTTGAATCCTTACAGCCTCCCATGTTTTGAAGTCAGGAATTCAAAACCCCTTGACCTTTGTTTGAGCACTAGCAAAACAGAGCGTTCACTGGGGTCATTTGCATTTCCACCACTCAAGTAGCTGACGTCTCCTTATTGGGTGCACAAGAATGAAGAGGTTATTGAGGAAGATTTTAGCACTATGTGGATCATTTCCAGGCTCTTCGTATATAATGATTGGGGAAGGATATTGCCAAAACTCTGGAGGCTCACTTTCAAGACAAAATCAGCATCAATCCTTTGTATGCTGATAAGGCATTAATCCGCCTCTCTCGAAGGAATTTGGAAGATTTGGTTGAGACTCCTAGTAAATGCCAGCATATTGGAATCTTTCATCTTTTAGTAAAAAAaTGGAACAAGTTCAAACATGGCAGGCCATTTATTCGAGGATTTGGAGGGTGGTTGTTCATCAACAACTTACTGTTAGATTATTGGAAAAATGATGTCTGTCTTTGTTGCAATTAGGAATTATTTCGGTGGCCTTGAGAGCATATCCTTGGATACATTGAATATGGTTGATGTGTCTAAAGATAAAATTAAGGTGAGAAAATCTCTGTGGTTTTTTACCAACAATGATAATAGTAGGATGCTTTTTTTGGAAAATTTTATCTCAACTTTGGAGATATTGAAATTATTGAAGAGCCCTCAGCCGTTCAAGATGCCCTCTTTATTAAGTATTTCTCAAATCCGATAGACTTAGCAAGAATTGTTCTTGTCTTAAAAGATGAAGGGCTAGATTTGAATGTTTCTAACCAGGAATGAGATCTTCTCAATTTGTCTCTTTCAAAGCCAAGCTTCTCAAGGAACCCATGCGTTGACTTCAATAGTAATCTCGACCAAGCTTTACCGGTCAGGGCTCCTTGCTCATTTTGTCGCAATCTTCCTCCCATTGCAGTAAATTTGGTTAATCAATTCAAACTAAGAGGGAACAAGAGAGAAAAATGTGACTGAATCCCTTGCTTTGCCCAATAAGAATCAATGCGGCCACACAACAACCAAGCAATTAAACTCCTCTCAAATTAATTCGGCTGACATCTTTTTAAATAAAGGATAGATGGCACCTCTCACACGTCAGACACTAATAACCTGCAAAATTTTCGGCAGCTGCTCACTAGGCCATAAGAACTTTTAGTTCCCTCAACGGCTGCTCTAGAACCCTTAAAAATACCTTCAAACTAAGCTCATTTCAACTCATCTTTAGGTTCTCTCTCATCTTCTTCTCTCCAACATTCCTCAGCAAAGTCAGGCCCAAGAGCAAAATAAAAAAGAAAGAAACATTACAAAATCTTCCCACATTACCTCAAGCCATTCCCAAATTTTTTCATTTGAAAGAAAAAATCTAAGAAGTCTTAGGCTAAACAATCCTTAAAAGCCAAGATAATAGGAGATCAAGCTCTTGATTTGATAAAAACAATCCGCGCCCACTCTCATTCCTTAGTCCAATCCAGCATATCCAAGTTTTTAGAGGCCAATCCAGACTTGTTGAATGTTAGTTGTACCCAGATTCTAGCTCCAACTCGTCCTACGAATTGAATTGGTCATGACTCTCACCCTACACAGTTTAAGTACTTAGAGCTCTATTTGCCCAACTTGAAGGTAAAACTTTTTAGGGGCTCTTTGAGCAAAACCCCTATCAATCCCTCTAGAAAGAAGGGTGAGTCTTCCTTTGAATCTCCTTTCAACGTTAGCAATGAGAAATTCGAGTTTTATGCTAAGTAAGTCATCTGAGCTTGAGAGGCAGAAGCATTTTGAGTCTTTAGAAACAGATCTTGCACTATTTCATTGCAACGAAGACTTGAAGTCTGAAATTTTGTCCTTTGCTACTTGCTCGTCCCCAGTCTTGCGAAATACCAGGTTATCGAAAATCATAGTTGCCGACTGTGAAATTATCTTAATTTGATTCTTTAGACAGTTAAATGTAAGTTTCTCAGACGATTGGTCCAATTTCTGGCTTTCCTTAATTTCTCTTCACATAGGTGGCAAGTAAAACCTCGCTGATTGTGGTAGATGACTTGAGATTGGTGTTGATTTTGATCTTTATTTCTTTGGTCTGCCTAAGGAAGTAACTTCTCAGGTTTGTTTTTGGGATAGGCTGATGGTATTGAAAACTTTTTCGAGCTTTCTATGGGTTCAGTTTATATTGGCAAGACAGATTTGGGGCAACTGTTTGCATCTTCTTAGCGGCTCTCTTTCTCTGATCATTTTGAAAATTTGGGTGTGCAAGTTTTCAGTCTCAAATGGGTTCCTTATGAGAGAACTTTAAGTTTTGATTTGTATTTAGCTTTCTACTTTTGTTATATCTTTGAGTCGTTTGTTTTTGTGTGTTTATTTTCCATTGGAATTTGTTTTTTGGTTGCCTTCTTTTTGTTTGCCAACGAAaTAAAAaCTAGCTTCAGTTTTAGTTTTAATTGTATTCTTCTAGTTCTCTTGCTCTTAGTATAATACTCTTGTACTTTGAGCTTAAGTCTCATTTATTATCATAAAGAGGCTTGTCTTTGTTAAAAAAAGTCTAGAATCCAGGTAAACTTTACATCTTCTGTCCCAGGATCGAAACTTGGTTCTGATACCAGTTGATAGAACACTGATGTAGTGTTTCTATTATATTGATATCTCAAACAGAAGAACAATATGAAAATACTAGTGATCCTCAAAAATAGAACCACAATAAGCAGAATTCACAAACAACAAACAGAACTTATCCTAAACAGAATTTGCAAGAACAAATCAATGCAGAAAACATAAAGAAAATTACTTAGAACAAAAGAACCTATTCCTCTGCTTCTCCTCTCTCTCAAGGAGTAATGCAGCCTATTTTGACTCCACAAATTCCGTACCCTTCTCCTCTTCCACCAAGCATTTAACTGCCCCTTCAGATTTAACCGCCCTCTTCACCCTAACTGCTGGTCCCACCCACGTGAGCTTCCTCACTCTCATTTCTGTCAGAATTCTTCCGTGCATCACCCTCACGTGCCATTTTATTTCTTCTATTATATGTAAACAATAATGGGGTCTAACAGATTCCATCCTGGAAAAACGTGGAACTATTAGGCACATTGTGGGAACATACTGGGATACTATTAAGCACGTAATGCTTTGTTAATTTGTTGTTAGTTTGTTGGGTGAGTTGGGGGGTGGAGTTGGGATATTTTTGCTGATTGATATTAACTTTTTACCATTTTGTTCTCAGAATCAGAGTCCTACCCTAACAGATTTTAGAGAAGAATTAAAAGATAATTGTTTTGTGGTTGTTATGCTTATTTTTTATAATGTTAACGATGGAGCATCATGATCAGGATTTGGTAACCTCCGATATTTAATTTCAAGTGAAGAGTATGTCTGGATATATTTTCTATCCACAACTCTCTAGTCTCAGTTAGTTATAATAGTTATCTAATTGATGACAACCTGCTCAAAATATCTATTAAAAAATCTTGAAAGCACCCCCCTTTCTACTTTTTGGAAGTTCATAATAGGTGTTTCTCTCTCACTAGTAAAGTAAATGTTTCATTTGAAAGTGTCTCAATGCAATCCTGTATTTCACCTAAAATCTCTTTGAACTATATTTGAGGAATAACGTGACATCTTTACTTCCTTGAAATCAGGATATCCAAGTTACATTGCGGGATGAAATCAAAAGTGCATGTGAATATCGCCCATTTGAGAAATGTGATTATAGTTCAAGGATTACTAACGAACTTTGCTGCAAGAAACTGGAATATATGGTTTCGAAGTTGGATGGAATGAAACAAACTATTGATGATTATCAAGTGAAAATAGAAGATTCTTGAGTCACATGTCCTAGTGAGCTTCTAATCTATTTCTGCCACTTCCCCCATTTGTAGAAACGAAAGGTTGAAGGAGAACTTCAGTCATGTATGTGTATAATTCATCTCTAGTAGAGCTAATAGCATACACTTTTGACTGTTGATTCATGCAAAGATCCTACTATAGTGTATCTGTTTCATTATCCTATGACTATGAGTTTTTTAGTATCAATTTCGAGGTGACAAAAATCCAATTCCAGGTAGATCTTCTATCTCAAGGGATGGCAAAACTATTCCTTGTTTTTCCTTTAATCTATGGCCTTTTCTATATTTTTATGTGGACCATATCTCATTGGCTGTATACATTTTCTTTCATTTGTTTTCGTCATGGAGCCTGTCACCGTCTCACCTT CACCGCGGCTGCCGCACGTTTCCTTGTAGTCGTCGTCGAACATACAATCCGGTTGCCATCAATCCACTCGCGTCGCTTTGGTCCTGCTCATCGTCGCAGGTCACCTTATCGTCGTTTTTTTTTCCTGAGCCAGCATAGCTCTTGATGGATCCGCCGGCCCATAATACTTCATTGCAGCGCCTCCAAAATGTGGAGAAGAGAATTGTGAGGGTTTTGGAACTAGCAGGAGGAGTCATGGAAGAGCTTGCCAACCCTGCTGGTCCAAGAAAGGAATTTGTCAACAATCATTGCAGTGAGTTCATGCAATTCATCAAGGATATCCAAGTTACATTGCGGGATGAAATCAAAAGTGCATGTGAATATCGCCCATTTGAGAAATGTGATTATAGTTCAAGGATTACTAACGAACTTTGCTGCAAGAAACTGGAATATATGGTTTCGAAGTTGGATGGAATGAAACAAACTATTGATGATTATCAAGTGAAAATAGAAGATTCTTGAGTCACATGTCCTAGTGAGCTTCTAATCTATTTCTGCCACTTCCCCCATTTGTAGAAACGAAAGGTTGAAGGAGAACTTCAGTCATGTATGTGTATAATTCATCTCTAGTAGAGCTAATAGCATACACTTTTGACTGTTGATTCATGCAAAGATCCTACTATAGTGTATCTGTTTCATTATCCTATGACTATGAGTTTTTTAGTATCAATTTCGAGGTGACAAAAATCCAATTCCAGGTAGATCTTCTATCTCAAGGGATGGCAAAACTATTCCTTGTTTTTCCTTTAATCTATGGCCTTTTCTATATTTTTATGTGGACCATATCTCATTGGCTGTATACATTTTCTTTCATTTGTTTTCGTCATGGAGCCTGTCACCGTCTCACCTT ATGGATCCGCCGGCCCATAATACTTCATTGCAGCGCCTCCAAAATGTGGAGAAGAGAATTGTGAGGGTTTTGGAACTAGCAGGAGGAGTCATGGAAGAGCTTGCCAACCCTGCTGGTCCAAGAAAGGAATTTGTCAACAATCATTGCAGTGAGTTCATGCAATTCATCAAGGATATCCAAGTTACATTGCGGGATGAAATCAAAAGTGCATGTGAATATCGCCCATTTGAGAAATGTGATTATAGTTCAAGGATTACTAACGAACTTTGCTGCAAGAAACTGGAATATATGGTTTCGAAGTTGGATGGAATGAAACAAACTATTGATGATTATCAAGTGAAAATAGAAGATTCTTGA MDPPAHNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKDIQVTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLEYMVSKLDGMKQTIDDYQVKIEDS*
BLAST of Cucsa.059120 vs. Swiss-Prot
Match: MED11_ARATH (Mediator of RNA polymerase II transcription subunit 11 OS=Arabidopsis thaliana GN=MED11 PE=1 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 2.8e-44 Identity = 82/111 (73.87%), Postives = 100/111 (90.09%), Query Frame = 1
BLAST of Cucsa.059120 vs. TrEMBL
Match: A0A0A0L450_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G594450 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 9.2e-58 Identity = 118/140 (84.29%), Postives = 118/140 (84.29%), Query Frame = 1
BLAST of Cucsa.059120 vs. TrEMBL
Match: A0A0B0N6V2_GOSAR (Mediator of RNA polymerase II transcription subunit 11 OS=Gossypium arboreum GN=F383_14611 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 2.4e-50 Identity = 97/115 (84.35%), Postives = 105/115 (91.30%), Query Frame = 1
BLAST of Cucsa.059120 vs. TrEMBL
Match: A0A061GG64_THECC (Mediator of RNA polymerase II transcription subunit 11 OS=Theobroma cacao GN=TCM_030340 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 3.2e-50 Identity = 96/112 (85.71%), Postives = 105/112 (93.75%), Query Frame = 1
BLAST of Cucsa.059120 vs. TrEMBL
Match: A0A061FQD7_THECC (Mediator of RNA polymerase II transcription subunit 11 OS=Theobroma cacao GN=TCM_044665 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 2.1e-49 Identity = 93/112 (83.04%), Postives = 106/112 (94.64%), Query Frame = 1
BLAST of Cucsa.059120 vs. TrEMBL
Match: A0A061FXJ7_THECC (Mediator of RNA polymerase II transcription subunit 11 OS=Theobroma cacao GN=TCM_044670 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 2.1e-49 Identity = 93/112 (83.04%), Postives = 106/112 (94.64%), Query Frame = 1
BLAST of Cucsa.059120 vs. TAIR10
Match: AT3G01435.1 (AT3G01435.1 Expressed protein) HSP 1 Score: 179.1 bits (453), Expect = 1.6e-45 Identity = 82/111 (73.87%), Postives = 100/111 (90.09%), Query Frame = 1
BLAST of Cucsa.059120 vs. NCBI nr
Match: gi|449453808|ref|XP_004144648.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 11 [Cucumis sativus]) HSP 1 Score: 243.4 bits (620), Expect = 2.0e-61 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1
BLAST of Cucsa.059120 vs. NCBI nr
Match: gi|659082827|ref|XP_008442051.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 11 [Cucumis melo]) HSP 1 Score: 238.8 bits (608), Expect = 4.8e-60 Identity = 115/118 (97.46%), Postives = 117/118 (99.15%), Query Frame = 1
BLAST of Cucsa.059120 vs. NCBI nr
Match: gi|700199753|gb|KGN54911.1| (hypothetical protein Csa_4G594450 [Cucumis sativus]) HSP 1 Score: 230.7 bits (587), Expect = 1.3e-57 Identity = 118/140 (84.29%), Postives = 118/140 (84.29%), Query Frame = 1
BLAST of Cucsa.059120 vs. NCBI nr
Match: gi|728830775|gb|KHG10218.1| (Mediator of RNA polymerase II transcription subunit 11 [Gossypium arboreum]) HSP 1 Score: 206.1 bits (523), Expect = 3.5e-50 Identity = 97/115 (84.35%), Postives = 105/115 (91.30%), Query Frame = 1
BLAST of Cucsa.059120 vs. NCBI nr
Match: gi|590626684|ref|XP_007026238.1| (Mediator of RNA polymerase II transcription subunit 11 [Theobroma cacao]) HSP 1 Score: 205.7 bits (522), Expect = 4.5e-50 Identity = 96/112 (85.71%), Postives = 105/112 (93.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |