Cucsa.057650 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGTTGAATTCTTTTATAATGGGATTGTTTTCTATCATAACATTATTGTAGGTTCAGCCAGAGGAAATTCATGTTGATAATAAGTATGAAGTGGTTTCGGTGAATGTCAATGAGGATGAACAGAAATTGGAGGAAGTAAAGACAGCTGAAGATCCTACTTCTAATTCTAAAGATTTGATTTCTGGAGAGGTTAGTTTTCGTGCAATAACTGGATTAACTTCTATTTGATCTCTGTGGTTTCTTGTTTAAAAGCATCCATTTTGATTGCTTTTCACTATAGAATGATGATACCCGTAAGGATAATGATGTCAAGCTGCAAGTAGAAAACGCAGATAATGTTGAAAATTAAACATGCTTTAAATTAACCAGTTATATGTGAATTGATTTATGAGAGTTAGAAAAAAGTTAAAAGATATGAGTTAAAATGTTTAGAGTTAATTTAGTAAGAGTTTCACATTATATAAGTGTAGGTTTTAAATTGTTGTGTTTAATTTGTGGTATGAGTTATGCCGGTGATAATCCTATAAATAGGATTGAAATGTTGTAATCTATATCATCTAAGTGTGAATAGAATATATGTAAAAAAGTTAGTCTTCCAATAAAGTGTATTTTTCCTCCTAAATATTCTATTCGGTAATTATCTATTTGGGGTGTTCATCGTACGCTTCCAATAGATAATTCAGTTTCAGGCATGGGAGAAAGCAATGGAGAAATTGATAATTTGCCAGTAAGATGATCTTATTGCATTTGCTCCTTTCAAATTTGCAAGGTCTTGAAGTTTTGTTAATGGAGAAAACAATCTATGCAGTTTTGAACTAAGCTATATTCGGTTCAGCCATTCAGGTGTTCTTTATGAGCACGCAGTTACTTGTCTTATGTTAATTAGAAAAAAAAaCTAATGGTTCCTTGGCAGCAGTAACCGAATGCCTTGTTCAAAATATGTAGTTTCTGCTGATGAGCATTTAAGTCGAAATGTTGCAGGTAACGATTTTGAGAGCATGTAAAGAATTTAATGGAGCTTTCTTTGGATCTATGAACGATGATGATGTTAGTGAAAAGGAGTTAATGGATGGAGCTGAGGAGAGCGAAGAGTTCAAATTCTTTCTGAAGTTGTTCACCGAGAATGAAAACTTGAGAAGATATTATGAGAACCACTATGGCGATGGAGAATTTACCTGTTTAGCTTGCCAATTAGCAGGAAGGAAAATAAAGAGTTTTAAGACATGTAGCCGCCTTCTCCAGCATTCTACTCATCTAGGGAAGAACAATACACAGAATCAGGGTCAGAAGCCTCAGAAAACTGAAGTGTTGAAAACGGGAATGCTGGCTCATAGGGCATATACTTTAGTTGTATGCAAGGTTCTTGGGTGCGACATTGAAATGCTTCCTGCAATCGTGTTAGAAGGCGAAGCTCTTGGTCGTTCCTTAACGAAGTCAGACGTGTCAAAGGTCTGCTAGTTCATCAAATCAATCTCTTACTATGCTTTTAACTTCATGCTCATTTTCTCTATTAACAACGCTGCTGCCTTTGGCAAAGTTGCAGGACAAATCTGTTGGCAAAATGCAGTCTAGTAATACGGATGATATCGTTGAAGATGACTCCATCTTGGAGGGTGTTAAATAAACTGATTCTATGAAGGTTGATCGCAATGGTGAAGTTACTTTGAAGGATGGTGCTCTGGATTTTGTAATGTGAGGTGTTAATGACAGTTAAGAACA GAAGTTGAATTCTTTTATAATGGGATTGTTTTCTATCATAACATTATTGTAGGTTCAGCCAGAGGAAATTCATGTTGATAATAAGTATGAAGTGGTTTCGGTGAATGTCAATGAGGATGAACAGAAATTGGAGGAAGTAAAGACAGCTGAAGATCCTACTTCTAATTCTAAAGATTTGATTTCTGGAGAGaTAATTCAGTTTCAGGCATGGGAGAAAGCAATGGAGAAATTGATAATTTGCCAGTAACGATTTTGAGAGCATGTAAAGAATTTAATGGAGCTTTCTTTGGATCTATGAACGATGATGATGTTAGTGAAAAGGAGTTAATGGATGGAGCTGAGGAGAGCGAAGAGTTCAAATTCTTTCTGAAGTTGTTCACCGAGAATGAAAACTTGAGAAGATATTATGAGAACCACTATGGCGATGGAGAATTTACCTGTTTAGCTTGCCAATTAGCAGGAAGGAAAATAAAGAGTTTTAAGACATGTAGCCGCCTTCTCCAGCATTCTACTCATCTAGGGAAGAACAATACACAGAATCAGGGTCAGAAGCCTCAGAAAACTGAAGTGTTGAAAACGGGAATGCTGGCTCATAGGGCATATACTTTAGTTGTATGCAAGGTTCTTGGGTGCGACATTGAAATGCTTCCTGCAATCGTGTTAGAAGGCGAAGCTCTTGGTCGTTCCTTAACGAAGTCAGACGTGTCAAAGGACAAATCTGTTGGCAAAATGCAGTCTAGTAATACGGATGATATCGTTGAAGATGACTCCATCTTGGAGGGTGTTAAATAAACTGATTCTATGAAGGTTGATCGCAATGGTGAAGTTACTTTGAAGGATGGTGCTCTGGATTTTGTAATGTGAGGTGTTAATGACAGTTAAGAACA ATGGGAGAAAGCAATGGAGAAATTGATAATTTGCCAGTAACGATTTTGAGAGCATGTAAAGAATTTAATGGAGCTTTCTTTGGATCTATGAACGATGATGATGTTAGTGAAAAGGAGTTAATGGATGGAGCTGAGGAGAGCGAAGAGTTCAAATTCTTTCTGAAGTTGTTCACCGAGAATGAAAACTTGAGAAGATATTATGAGAACCACTATGGCGATGGAGAATTTACCTGTTTAGCTTGCCAATTAGCAGGAAGGAAAATAAAGAGTTTTAAGACATGTAGCCGCCTTCTCCAGCATTCTACTCATCTAGGGAAGAACAATACACAGAATCAGGGTCAGAAGCCTCAGAAAACTGAAGTGTTGAAAACGGGAATGCTGGCTCATAGGGCATATACTTTAGTTGTATGCAAGGTTCTTGGGTGCGACATTGAAATGCTTCCTGCAATCGTGTTAGAAGGCGAAGCTCTTGGTCGTTCCTTAACGAAGTCAGACGTGTCAAAGGACAAATCTGTTGGCAAAATGCAGTCTAGTAATACGGATGATATCGTTGAAGATGACTCCATCTTGGAGGGTGTTAAATAA MGESNGEIDNLPVTILRACKEFNGAFFGSMNDDDVSEKELMDGAEESEEFKFFLKLFTENENLRRYYENHYGDGEFTCLACQLAGRKIKSFKTCSRLLQHSTHLGKNNTQNQGQKPQKTEVLKTGMLAHRAYTLVVCKVLGCDIEMLPAIVLEGEALGRSLTKSDVSKDKSVGKMQSSNTDDIVEDDSILEGVK*
BLAST of Cucsa.057650 vs. TrEMBL
Match: A0A0A0L022_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G627140 PE=4 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 1.2e-113 Identity = 206/213 (96.71%), Postives = 208/213 (97.65%), Query Frame = 1
BLAST of Cucsa.057650 vs. TrEMBL
Match: A0A0A0L022_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G627140 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.1e-20 Identity = 68/184 (36.96%), Postives = 98/184 (53.26%), Query Frame = 1
HSP 2 Score: 332.0 bits (850), Expect = 5.3e-88 Identity = 167/197 (84.77%), Postives = 178/197 (90.36%), Query Frame = 1
BLAST of Cucsa.057650 vs. TrEMBL
Match: A0A0A0L218_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G627150 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.6e-20 Identity = 71/183 (38.80%), Postives = 99/183 (54.10%), Query Frame = 1
HSP 2 Score: 128.3 bits (321), Expect = 1.2e-26 Identity = 86/184 (46.74%), Postives = 107/184 (58.15%), Query Frame = 1
BLAST of Cucsa.057650 vs. TrEMBL
Match: V4TQM8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024254mg PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.0e-26 Identity = 80/160 (50.00%), Postives = 97/160 (60.62%), Query Frame = 1
BLAST of Cucsa.057650 vs. TrEMBL
Match: A0A067DZF0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007382mg PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.0e-26 Identity = 80/160 (50.00%), Postives = 97/160 (60.62%), Query Frame = 1
BLAST of Cucsa.057650 vs. TAIR10
Match: AT1G78810.1 (AT1G78810.1 unknown protein) HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13 Identity = 50/151 (33.11%), Postives = 73/151 (48.34%), Query Frame = 1
HSP 2 Score: 73.2 bits (178), Expect = 2.2e-13 Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 1
BLAST of Cucsa.057650 vs. NCBI nr
Match: gi|700199905|gb|KGN55063.1| (hypothetical protein Csa_4G627140 [Cucumis sativus]) HSP 1 Score: 417.2 bits (1071), Expect = 1.8e-113 Identity = 206/213 (96.71%), Postives = 208/213 (97.65%), Query Frame = 1
BLAST of Cucsa.057650 vs. NCBI nr
Match: gi|700199905|gb|KGN55063.1| (hypothetical protein Csa_4G627140 [Cucumis sativus]) HSP 1 Score: 107.5 bits (267), Expect = 3.0e-20 Identity = 68/184 (36.96%), Postives = 98/184 (53.26%), Query Frame = 1
HSP 2 Score: 356.3 bits (913), Expect = 3.7e-95 Identity = 177/212 (83.49%), Postives = 189/212 (89.15%), Query Frame = 1
BLAST of Cucsa.057650 vs. NCBI nr
Match: gi|659127518|ref|XP_008463745.1| (PREDICTED: uncharacterized protein LOC103501816 isoform X1 [Cucumis melo]) HSP 1 Score: 106.7 bits (265), Expect = 5.2e-20 Identity = 70/184 (38.04%), Postives = 100/184 (54.35%), Query Frame = 1
HSP 2 Score: 356.3 bits (913), Expect = 3.7e-95 Identity = 177/212 (83.49%), Postives = 189/212 (89.15%), Query Frame = 1
BLAST of Cucsa.057650 vs. NCBI nr
Match: gi|659127522|ref|XP_008463747.1| (PREDICTED: uncharacterized protein LOC103501816 isoform X3 [Cucumis melo]) HSP 1 Score: 105.1 bits (261), Expect = 1.5e-19 Identity = 70/183 (38.25%), Postives = 99/183 (54.10%), Query Frame = 1
HSP 2 Score: 347.8 bits (891), Expect = 1.3e-92 Identity = 175/212 (82.55%), Postives = 187/212 (88.21%), Query Frame = 1
BLAST of Cucsa.057650 vs. NCBI nr
Match: gi|659127520|ref|XP_008463746.1| (PREDICTED: uncharacterized protein LOC103501816 isoform X2 [Cucumis melo]) HSP 1 Score: 106.7 bits (265), Expect = 5.2e-20 Identity = 70/184 (38.04%), Postives = 100/184 (54.35%), Query Frame = 1
HSP 2 Score: 340.5 bits (872), Expect = 2.1e-90 Identity = 169/197 (85.79%), Postives = 180/197 (91.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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