CmoCh09G008180 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAATGAACACAGTTTAAATCTCAGAAGCATTTTATCAAACAGGTAGTGAACCCTGTAAAAAGACAACATCTCTTTCACTGGATGAGCAGTCAACGTTTCCCCATTTCAAAGAATCGAAAACAGACACTACTGAAGTTTTGTATTCGAACATGCCTTCAAGAGCGCGAACCCATTAATCTCCTCGGCGGAAGAAACAGGGTCGGAACCAAAAGAAGCGCAATCAGAATGAAACCAACGGGTCATGTCGAATCCCCGCCCATCTCTGCTCACAAAACCCAACCTCAGTGCCTTTGCAGGAATGGTTTTGGAGCAGTTCTTGCATGTGGAACGATTCGACTTGGCGTACTCGGCAACAATTTTTACAGCAGATGTAGACATTGGTGGACCTTGAAAGAAAATACGGCGACTGTGAGAAGAGAAACGAGAGAAATGGCTCAGTGGGGACTTGGGAATTTGAAGGAGGGAAGAAAGTATGTGGTTGTTACAGTAGGTCATATGACTGGTACGGACTGTGGAGCCGATCAGCGTACGGACGAGGGTAGAATGCACAAGGTAGAAGACGACGAGCGACGAAATTCCCCTTCTAAATTCTAATTGAGATATATATATAGAGAGAGATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGCACATAAATCATAAGCGCCTATTTGTGATTTATGATCGGAGAGGATGAGACGAGCGATGATCCCCAACCTCTATTACTCTTGATTCCATCATCTTTCCACCAATGAATCCTTACTCCGAGGAAAGACTCACCGAAGAGGTTCTCTATCTCCACTCTCTGTGGCAGCGAGGTCCGCCGAGGGGCCCTAAGCCCACTCGCTATTATTTATCCACCGCCGTCGCCGCTGCTACGAATAAGAGACCCAGAGACACAAAGAATCGAAAGCAAAAGAAGAAGAAGCCACGCCTCGAGCCATTACAAGACACCGGCCCCGAATGGCCCTGCCCGGAGCCAGTGCAAAATCAGCCCTCGACGTCATCTGGGTGGCCGCCAATGCCCTGTGCTACTCCGGCGGCTCGGCTGGTGTCGTCTGAAGAGCGAGCAAATCGTGTGGCGTTGCAATTGCAGTACAAGGGTATCGAGGCTTGCCGGAGATTTCTCATTAGAAATGCCGATTCAGGGAGTGATGAAGAGGTGGAGGAGGAAGAGGGGAATGATGGGGAGATTATGGAAAGTGAAGAGTACAAATTCTTTTTGAATCTGTTCATGGAGAATGATGAACTTAGGGGCTATTACGAGAAGAATTGTGAAGATGGGTTGTTTTGTTGCTTGGTTTGTGGTGGAATGGGGAAGAAGAAATCTGGGAAAAGGTTTAAGAACTGCATTGGGCTTGTTCATCATTCGAATTCGATATCAAGGACGAAGAAGAAGGTGGCTCATAGGGCTTTTGGACAGGCCGTATGCAGGGTTTTTGGTTGGGATATTGATCGACTTCCAACCATTGTGTTGAATGGCGAGCCTCTCAGTCGATCATTAGCCACCTCTGGAGATTTTAAGGTACTTTACTGGTCTGCCCATGTGTTTAAACTTGAACTTGTTTATAATGGCATTCAATACAAAATTGCTTTCGATTAAAATGCATTGTAGGATCAGCCAGAGGAAAATCAGGTGGCTGAAGAACATGATTCTTGGGTTCATAATGAAAATGTAGCCATTTTGAATGATGAAATTGATATGAAGAATGAACAGAAATGGGAGGAAGAAAAGACAGCTGAAGATTTGATTTCTGGCGAGGTTAGTTCATTTACTTCCTTTATAGAATCAGTTGAGGTGTTCTTGATGATCATGCAATTGTCTTGTCTTATGTTCATTAGAAAACGAAGAACGATGATTCCTCGGTGGTCGTAACCGAATGCCGAAAACATGTAGTTTCTTCTGATGAGCTGATACAGTTGGATGTGTTGCAGGTACCCGAGTCGATTACGGAAGCATGTGAAGAATTTTTTGCTGCCTTCTTGACATCTATGGCTGACGACGATGTTAGCGAAAACAACGCAATCGAGGAACGCGAAGAGTTCAAATTCTTTTTAAAGCTGTTCATTGAGAATGAAAGCTTGAGAAGATATTACAAGAACAAGTATGATGATGGAGAATTTTCGTGTTTAGTTTGTGAAGGAGCGGGAAAGAAAACGTTGAGGAGTTTTAAGACGTGCGTTCGCCTTCTCCGACATACAACTTATCCTGGGAAGAACAAAACAGGGAAAAAACGGGTTAAGCCTCACATTGCTAAGATGTTGAAAATAAAGATGCTGGCTCATAGAGCATATAGTTTAGTTATATGCCAGGTTCTTGGTTGGGACATAGAAAAGCTTCCTGCAATCGTGTTAAAAGGCGAAGGCCATGGTTGTTCGTTAACGAAGCTAGACGTGTTGAAAGTATGCTAATTCATTTGATCAATCTCTTCCTATGCTCGAACTTTCGTGTTCTTGATTCATACTAACAATGCTGGAATTGCAGGACAACCCGGTTGGCAATGCAGGTGATAATACGAACGAAGTAGATGATCCTGTGAGAGATGACTCCACTGAGATCGACTAAGTTCACAACCAATCCGTCGGTGCAGTCAGGATGATACTGGAGAAGATGACTCGAAAAAGGTTAGTGAACTGTTCTTGTTCTTGTTGTTTCTGTGTTAGACTGGTAGATGAAGGTTTTGTGGTATTTTGAGTGTGAGATATGATATTTAGGCCTATTCAAAAGAAGCCCTGTTGGCTCCCATTTTGAACCCCCATTCCCTTCATTCTATTGGTTTCTCATGAATCTTGAAGTACGGTTGGGATGGAAAGAATAGGTTGTTGATAAATGCAAAGCTAGGAGTCTCATGTTGGTTTCTCATGGTCACCTTTAAAACTCCGATCCCTTTGACGTCATCTGCTACTAGGGAGAGATTTCCATACCATTATAAGGAATGCTTTGTTCCCCTCTCCAACTGACGTAGGACCTCACAATCCAAACCCCTTTTTGCTCACCGTCCTCGCTGGCATACTGCCCAGTGTGTAACTCTGATATCATTTGTAATCGTTCAAGCCCACCGCTAGCAGATATTGTCTATTTGGTGTCTGCCTCACGGTTTTAAAACATGTCTACTAGGGAGAGGTTTCCACACCCTTATAAGAAATGCTCTATTCTCCTCTCCAACCGATGTGGGACCTCATAATCCACCCCTCTTGGGACCCAACGTCCTTGTCGGCACACTGTCCGGTGTCTGGGTTGCGATACCATTTGTAACAGCCTAAGCCCACCGCTAGCAGATATTGTCTGCTTTGGCGTCAACCTCACGGTTTTAAAATGCGTCAATTAGGGAGAGGTTTCCACACCCTTATAAGGAATGCTTCGTTCCCCTCTTCAACTGACGTGGGACCTCACAATCCACCCTTCTTGGAGCCCAGTGTCCTCGCTGGCTTATCTCTCAGTGTCTGGCTCTAATACCATTTGTAACAGCCCAAACTCACCATTAGTAGATAATGTCCGCTTTGGCGTCAGCCTCACGGTTTTAAAATGCGTCTACTAAGAAGAAGTTTCCACATCCTTATAAGGAATGTTTCGTTTCCCCCTCTAACCGACATGAGACTTCATAATCTACCCCCTTGGATTCCAACGTTCTCGCTGGCACATTGCCCAGTGTGTGGCTCTAATACTATTTGTAACAGCTCAAGCCCACTACTAACAGATATTGTCTGTTTTGGCCCGTAACGTATCGTCGTCAGCCTCACAGTTTTAAAACGCATCTACTAGGGAGAGGTTTCCCCACCCTGTTCCACTCTCCAACCGATGTTGGACCTCAGAGAACTAATCACATGGATAATACTACATAAGAAGCCGCCATGTTTGCCATCTAGCTAAGAACGATAACGTTAAATTCCCTATACTATGAACATTTCAATCGATTCATTGAATAATTGTATCATATCAACTTTCAATACTCAACTCTACAAGGGAGATCACCAAAATTAACACACCTCATCTCTGCAGGTTTTGGCTCTGCCCCGAGCTCGTTATAACCAAGTCGGTCTCTAATGGCGACTGAAGATGAGAGGAGCAGGGCAAGGATGATTCACAACGTAACAGGGAGGAGAGTTTCAGTTTCTTTCATTTCTAATTTTCTTTTTAAGTTCATTTCATTTATATCGAGGCGAATCAAATTACATGAATTTCGAACAAATTTAGATTGAAATTCATCGACTCCCATTAATTTCTTGTCAAAATTCATGAATCCCGACCACATTTCACTTGGAATTCATGATTCCTAACCATTTTCGACGCATATTTATAAATTTTGATTGAGATTATGGTTGTGAACAGGTCAAAATTTTTTCATTTAATAATAATTTTTAAAATAACTTAATTATTACACAAAAATATTATTATTATTATTTATCATTTTTTTCAAATACAACCTTGAC GAATGAACACAGTTTAAATCTCAGAAGCATTTTATCAAACAGGTAGTGAACCCTGTAAAAAGACAACATCTCTTTCACTGGATGAGCAGTCAACGTTTCCCCATTTCAAAGAATCGAAAACAGACACTACTGAAGTTTTGTATTCGAACATGCCTTCAAGAGCGCGAACCCATTAATCTCCTCGGCGGAAGAAACAGGGTCGGAACCAAAAGAAGCGCAATCAGAATGAAACCAACGGGTCATGTCGAATCCCCGCCCATCTCTGCTCACAAAACCCAACCTCAGTGCCTTTGCAGGAATGGTTTTGGAGCAGTTCTTGCATGTGGAACGATTCGACTTGGCGTACTCGGCAACAATTTTTACAGCAGATGTAGACATTGGTGGACCTTGAAAGAAAATACGGCGACTGTGAGAAGAGAAACGAGAGAAATGGCTCAGTGGGGACTTGGGAATTTGAAGGAGGGAAGAAAGTATGTGGTTGTTACAGTAGGTCATATGACTGGTACGGACTGTGGAGCCGATCAGCGTACGGACGAGGGTAGAATGCACAAGGTAGAAGACGACGAGCGACGAAATTCCCCTTCTAAATTCTAATTGAGATATATATATAGAGAGAGATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGCACATAAATCATAAGCGCCTATTTGTGATTTATGATCGGAGAGGATGAGACGAGCGATGATCCCCAACCTCTATTACTCTTGATTCCATCATCTTTCCACCAATGAATCCTTACTCCGAGGAAAGACTCACCGAAGAGGTTCTCTATCTCCACTCTCTGTGGCAGCGAGGTCCGCCGAGGGGCCCTAAGCCCACTCGCTATTATTTATCCACCGCCGTCGCCGCTGCTACGAATAAGAGACCCAGAGACACAAAGAATCGAAAGCAAAAGAAGAAGAAGCCACGCCTCGAGCCATTACAAGACACCGGCCCCGAATGGCCCTGCCCGGAGCCAGTGCAAAATCAGCCCTCGACGTCATCTGGGTGGCCGCCAATGCCCTGTGCTACTCCGGCGGCTCGGCTGGTGTCGTCTGAAGAGCGAGCAAATCGTGTGGCGTTGCAATTGCAGTACAAGGGTATCGAGGCTTGCCGGAGATTTCTCATTAGAAATGCCGATTCAGGGAGTGATGAAGAGGTGGAGGAGGAAGAGGGGAATGATGGGGAGATTATGGAAAGTGAAGAGTACAAATTCTTTTTGAATCTGTTCATGGAGAATGATGAACTTAGGGGCTATTACGAGAAGAATTGTGAAGATGGGTTGTTTTGTTGCTTGGTTTGTGGTGGAATGGGGAAGAAGAAATCTGGGAAAAGGTTTAAGAACTGCATTGGGCTTGTTCATCATTCGAATTCGATATCAAGGACGAAGAAGAAGGTGGCTCATAGGGCTTTTGGACAGGCCGTATGCAGGGTTTTTGGTTGGGATATTGATCGACTTCCAACCATTGTGTTGAATGGCGAGCCTCTCAGTCGATCATTAGCCACCTCTGGAGATTTTAAGGATCAGCCAGAGGAAAATCAGGTGGCTGAAGAACATGATTCTTGGGTTCATAATGAAAATGTAGCCATTTTGAATGATGAAATTGATATGAAGAATGAACAGAAATGGGAGGAAGAAAAGACAGCTGAAGATTTGATTTCTGGCGAGAAAACGAAGAACGATGATTCCTCGGTGGTCGTAACCGAATGCCGAAAACATGTAGTTTCTTCTGATGAGCTGATACAGTTGGATGTGTTGCAGGTACCCGAGTCGATTACGGAAGCATGTGAAGAATTTTTTGCTGCCTTCTTGACATCTATGGCTGACGACGATGTTAGCGAAAACAACGCAATCGAGGAACGCGAAGAGTTCAAATTCTTTTTAAAGCTGTTCATTGAGAATGAAAGCTTGAGAAGATATTACAAGAACAAGTATGATGATGGAGAATTTTCGTGTTTAGTTTGTGAAGGAGCGGGAAAGAAAACGTTGAGGAGTTTTAAGACGTGCGTTCGCCTTCTCCGACATACAACTTATCCTGGGAAGAACAAAACAGGGAAAAAACGGGTTAAGCCTCACATTGCTAAGATGTTGAAAATAAAGATGCTGGCTCATAGAGCATATAGTTTAGTTATATGCCAGGTTCTTGGTTGGGACATAGAAAAGCTTCCTGCAATCGTGTTAAAAGGCGAAGGCCATGGTTGTTCGTTAACGAAGCTAGACGTGTTGAAAGACAACCCGGTTGGCAATGCAGGTGATAATACGAACGAAGTAGATGATCCTGTGAGAGATGACTCCACTGAGATCGACTAAGTTCACAACCAATCCGTCGGTGCAGTCAGGATGATACTGGAGAAGATGACTCGAAAAAGGTTTTGGCTCTGCCCCGAGCTCGTTATAACCAAGTCGGTCTCTAATGGCGACTGAAGATGAGAGGAGCAGGGCAAGGATGATTCACAACGTAACAGGGAGGAGAGTTTCAGTTTCTTTCATTTCTAATTTTCTTTTTAAGTTCATTTCATTTATATCGAGGCGAATCAAATTACATGAATTTCGAACAAATTTAGATTGAAATTCATCGACTCCCATTAATTTCTTGTCAAAATTCATGAATCCCGACCACATTTCACTTGGAATTCATGATTCCTAACCATTTTCGACGCATATTTATAAATTTTGATTGAGATTATGGTTGTGAACAGGTCAAAATTTTTTCATTTAATAATAATTTTTAAAATAACTTAATTATTACACAAAAATATTATTATTATTATTTATCATTTTTTTCAAATACAACCTTGAC ATGAATCCTTACTCCGAGGAAAGACTCACCGAAGAGGTTCTCTATCTCCACTCTCTGTGGCAGCGAGGTCCGCCGAGGGGCCCTAAGCCCACTCGCTATTATTTATCCACCGCCGTCGCCGCTGCTACGAATAAGAGACCCAGAGACACAAAGAATCGAAAGCAAAAGAAGAAGAAGCCACGCCTCGAGCCATTACAAGACACCGGCCCCGAATGGCCCTGCCCGGAGCCAGTGCAAAATCAGCCCTCGACGTCATCTGGGTGGCCGCCAATGCCCTGTGCTACTCCGGCGGCTCGGCTGGTGTCGTCTGAAGAGCGAGCAAATCGTGTGGCGTTGCAATTGCAGTACAAGGGTATCGAGGCTTGCCGGAGATTTCTCATTAGAAATGCCGATTCAGGGAGTGATGAAGAGGTGGAGGAGGAAGAGGGGAATGATGGGGAGATTATGGAAAGTGAAGAGTACAAATTCTTTTTGAATCTGTTCATGGAGAATGATGAACTTAGGGGCTATTACGAGAAGAATTGTGAAGATGGGTTGTTTTGTTGCTTGGTTTGTGGTGGAATGGGGAAGAAGAAATCTGGGAAAAGGTTTAAGAACTGCATTGGGCTTGTTCATCATTCGAATTCGATATCAAGGACGAAGAAGAAGGTGGCTCATAGGGCTTTTGGACAGGCCGTATGCAGGGTTTTTGGTTGGGATATTGATCGACTTCCAACCATTGTGTTGAATGGCGAGCCTCTCAGTCGATCATTAGCCACCTCTGGAGATTTTAAGGATCAGCCAGAGGAAAATCAGGTGGCTGAAGAACATGATTCTTGGGTTCATAATGAAAATGTAGCCATTTTGAATGATGAAATTGATATGAAGAATGAACAGAAATGGGAGGAAGAAAAGACAGCTGAAGATTTGATTTCTGGCGAGAAAACGAAGAACGATGATTCCTCGGTGGTCGTAACCGAATGCCGAAAACATGTAGTTTCTTCTGATGAGCTGATACAGTTGGATGTGTTGCAGGTACCCGAGTCGATTACGGAAGCATGTGAAGAATTTTTTGCTGCCTTCTTGACATCTATGGCTGACGACGATGTTAGCGAAAACAACGCAATCGAGGAACGCGAAGAGTTCAAATTCTTTTTAAAGCTGTTCATTGAGAATGAAAGCTTGAGAAGATATTACAAGAACAAGTATGATGATGGAGAATTTTCGTGTTTAGTTTGTGAAGGAGCGGGAAAGAAAACGTTGAGGAGTTTTAAGACGTGCGTTCGCCTTCTCCGACATACAACTTATCCTGGGAAGAACAAAACAGGGAAAAAACGGGTTAAGCCTCACATTGCTAAGATGTTGAAAATAAAGATGCTGGCTCATAGAGCATATAGTTTAGTTATATGCCAGGTTCTTGGTTGGGACATAGAAAAGCTTCCTGCAATCGTGTTAAAAGGCGAAGGCCATGGTTGTTCGTTAACGAAGCTAGACGTGTTGAAAGACAACCCGGTTGGCAATGCAGGTGATAATACGAACGAAGTAGATGATCCTGTGAGAGATGACTCCACTGAGATCGACTAA
BLAST of CmoCh09G008180 vs. TrEMBL
Match: A0A0A0L022_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G627140 PE=4 SV=1) HSP 1 Score: 501.9 bits (1291), Expect = 9.3e-139 Identity = 286/492 (58.13%), Postives = 344/492 (69.92%), Query Frame = 1
BLAST of CmoCh09G008180 vs. TrEMBL
Match: A0A0A0L218_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G627150 PE=4 SV=1) HSP 1 Score: 490.3 bits (1261), Expect = 2.8e-135 Identity = 281/479 (58.66%), Postives = 328/479 (68.48%), Query Frame = 1
BLAST of CmoCh09G008180 vs. TrEMBL
Match: B9I1T3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s11090g PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 2.7e-85 Identity = 209/551 (37.93%), Postives = 300/551 (54.45%), Query Frame = 1
BLAST of CmoCh09G008180 vs. TrEMBL
Match: M5WJL9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020001mg PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 4.0e-81 Identity = 210/560 (37.50%), Postives = 287/560 (51.25%), Query Frame = 1
BLAST of CmoCh09G008180 vs. TrEMBL
Match: A0A061FFR3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_031863 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 2.6e-80 Identity = 207/543 (38.12%), Postives = 284/543 (52.30%), Query Frame = 1
BLAST of CmoCh09G008180 vs. TAIR10
Match: AT1G78810.1 (AT1G78810.1 unknown protein) HSP 1 Score: 148.3 bits (373), Expect = 1.3e-35 Identity = 102/274 (37.23%), Postives = 145/274 (52.92%), Query Frame = 1
BLAST of CmoCh09G008180 vs. NCBI nr
Match: gi|659127518|ref|XP_008463745.1| (PREDICTED: uncharacterized protein LOC103501816 isoform X1 [Cucumis melo]) HSP 1 Score: 589.3 bits (1518), Expect = 6.4e-165 Identity = 334/540 (61.85%), Postives = 392/540 (72.59%), Query Frame = 1
BLAST of CmoCh09G008180 vs. NCBI nr
Match: gi|659127520|ref|XP_008463746.1| (PREDICTED: uncharacterized protein LOC103501816 isoform X2 [Cucumis melo]) HSP 1 Score: 589.0 bits (1517), Expect = 8.3e-165 Identity = 335/540 (62.04%), Postives = 393/540 (72.78%), Query Frame = 1
BLAST of CmoCh09G008180 vs. NCBI nr
Match: gi|659127522|ref|XP_008463747.1| (PREDICTED: uncharacterized protein LOC103501816 isoform X3 [Cucumis melo]) HSP 1 Score: 583.6 bits (1503), Expect = 3.5e-163 Identity = 333/540 (61.67%), Postives = 391/540 (72.41%), Query Frame = 1
BLAST of CmoCh09G008180 vs. NCBI nr
Match: gi|659127524|ref|XP_008463748.1| (PREDICTED: uncharacterized protein LOC103501816 isoform X4 [Cucumis melo]) HSP 1 Score: 582.8 bits (1501), Expect = 6.0e-163 Identity = 327/529 (61.81%), Postives = 378/529 (71.46%), Query Frame = 1
BLAST of CmoCh09G008180 vs. NCBI nr
Match: gi|778695712|ref|XP_011654040.1| (PREDICTED: uncharacterized protein LOC101208512 isoform X1 [Cucumis sativus]) HSP 1 Score: 538.9 bits (1387), Expect = 9.9e-150 Identity = 311/530 (58.68%), Postives = 366/530 (69.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |