Cucsa.057650 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.057650
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Methylthioribose-1-phosphate isomerase
Location	scaffold00614 : 40808 .. 46020 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGTTGAATTCTTTTATAATGGGATTGTTTTCTATCATAACATTATTGTAGGTTCAGCCAGAGGAAATTCATGTTGATAATAAGTATGAAGTGGTTTCGGTGAATGTCAATGAGGATGAACAGAAATTGGAGGAAGTAAAGACAGCTGAAGATCCTACTTCTAATTCTAAAGATTTGATTTCTGGAGAGGTTAGTTTTCGTGCAATAACTGGATTAACTTCTATTTGATCTCTGTGGTTTCTTGTTTAAAAGCATCCATTTTGATTGCTTTTCACTATAGAATGATGATACCCGTAAGGATAATGATGTCAAGCTGCAAGTAGAAAACGCAGATAATGTTGAAAATTAAACATGCTTTAAATTAACCAGTTATATGTGAATTGATTTATGAGAGTTAGAAAAAAGTTAAAAGATATGAGTTAAAATGTTTAGAGTTAATTTAGTAAGAGTTTCACATTATATAAGTGTAGGTTTTAAATTGTTGTGTTTAATTTGTGGTATGAGTTATGCCGGTGATAATCCTATAAATAGGATTGAAATGTTGTAATCTATATCATCTAAGTGTGAATAGAATATATGTAAAAAAGTTAGTCTTCCAATAAAGTGTATTTTTCCTCCTAAATATTCTATTCGGTAATTATCTATTTGGGGTGTTCATCGTACGCTTCCAATAGATAATTCAGTTTCAGGCATGGGAGAAAGCAATGGAGAAATTGATAATTTGCCAGTAAGATGATCTTATTGCATTTGCTCCTTTCAAATTTGCAAGGTCTTGAAGTTTTGTTAATGGAGAAAACAATCTATGCAGTTTTGAACTAAGCTATATTCGGTTCAGCCATTCAGGTGTTCTTTATGAGCACGCAGTTACTTGTCTTATGTTAATTAGAAAAAAAAaCTAATGGTTCCTTGGCAGCAGTAACCGAATGCCTTGTTCAAAATATGTAGTTTCTGCTGATGAGCATTTAAGTCGAAATGTTGCAGGTAACGATTTTGAGAGCATGTAAAGAATTTAATGGAGCTTTCTTTGGATCTATGAACGATGATGATGTTAGTGAAAAGGAGTTAATGGATGGAGCTGAGGAGAGCGAAGAGTTCAAATTCTTTCTGAAGTTGTTCACCGAGAATGAAAACTTGAGAAGATATTATGAGAACCACTATGGCGATGGAGAATTTACCTGTTTAGCTTGCCAATTAGCAGGAAGGAAAATAAAGAGTTTTAAGACATGTAGCCGCCTTCTCCAGCATTCTACTCATCTAGGGAAGAACAATACACAGAATCAGGGTCAGAAGCCTCAGAAAACTGAAGTGTTGAAAACGGGAATGCTGGCTCATAGGGCATATACTTTAGTTGTATGCAAGGTTCTTGGGTGCGACATTGAAATGCTTCCTGCAATCGTGTTAGAAGGCGAAGCTCTTGGTCGTTCCTTAACGAAGTCAGACGTGTCAAAGGTCTGCTAGTTCATCAAATCAATCTCTTACTATGCTTTTAACTTCATGCTCATTTTCTCTATTAACAACGCTGCTGCCTTTGGCAAAGTTGCAGGACAAATCTGTTGGCAAAATGCAGTCTAGTAATACGGATGATATCGTTGAAGATGACTCCATCTTGGAGGGTGTTAAATAAACTGATTCTATGAAGGTTGATCGCAATGGTGAAGTTACTTTGAAGGATGGTGCTCTGGATTTTGTAATGTGAGGTGTTAATGACAGTTAAGAACA

mRNA sequence

GAAGTTGAATTCTTTTATAATGGGATTGTTTTCTATCATAACATTATTGTAGGTTCAGCCAGAGGAAATTCATGTTGATAATAAGTATGAAGTGGTTTCGGTGAATGTCAATGAGGATGAACAGAAATTGGAGGAAGTAAAGACAGCTGAAGATCCTACTTCTAATTCTAAAGATTTGATTTCTGGAGAGaTAATTCAGTTTCAGGCATGGGAGAAAGCAATGGAGAAATTGATAATTTGCCAGTAACGATTTTGAGAGCATGTAAAGAATTTAATGGAGCTTTCTTTGGATCTATGAACGATGATGATGTTAGTGAAAAGGAGTTAATGGATGGAGCTGAGGAGAGCGAAGAGTTCAAATTCTTTCTGAAGTTGTTCACCGAGAATGAAAACTTGAGAAGATATTATGAGAACCACTATGGCGATGGAGAATTTACCTGTTTAGCTTGCCAATTAGCAGGAAGGAAAATAAAGAGTTTTAAGACATGTAGCCGCCTTCTCCAGCATTCTACTCATCTAGGGAAGAACAATACACAGAATCAGGGTCAGAAGCCTCAGAAAACTGAAGTGTTGAAAACGGGAATGCTGGCTCATAGGGCATATACTTTAGTTGTATGCAAGGTTCTTGGGTGCGACATTGAAATGCTTCCTGCAATCGTGTTAGAAGGCGAAGCTCTTGGTCGTTCCTTAACGAAGTCAGACGTGTCAAAGGACAAATCTGTTGGCAAAATGCAGTCTAGTAATACGGATGATATCGTTGAAGATGACTCCATCTTGGAGGGTGTTAAATAAACTGATTCTATGAAGGTTGATCGCAATGGTGAAGTTACTTTGAAGGATGGTGCTCTGGATTTTGTAATGTGAGGTGTTAATGACAGTTAAGAACA

Coding sequence (CDS)

ATGGGAGAAAGCAATGGAGAAATTGATAATTTGCCAGTAACGATTTTGAGAGCATGTAAAGAATTTAATGGAGCTTTCTTTGGATCTATGAACGATGATGATGTTAGTGAAAAGGAGTTAATGGATGGAGCTGAGGAGAGCGAAGAGTTCAAATTCTTTCTGAAGTTGTTCACCGAGAATGAAAACTTGAGAAGATATTATGAGAACCACTATGGCGATGGAGAATTTACCTGTTTAGCTTGCCAATTAGCAGGAAGGAAAATAAAGAGTTTTAAGACATGTAGCCGCCTTCTCCAGCATTCTACTCATCTAGGGAAGAACAATACACAGAATCAGGGTCAGAAGCCTCAGAAAACTGAAGTGTTGAAAACGGGAATGCTGGCTCATAGGGCATATACTTTAGTTGTATGCAAGGTTCTTGGGTGCGACATTGAAATGCTTCCTGCAATCGTGTTAGAAGGCGAAGCTCTTGGTCGTTCCTTAACGAAGTCAGACGTGTCAAAGGACAAATCTGTTGGCAAAATGCAGTCTAGTAATACGGATGATATCGTTGAAGATGACTCCATCTTGGAGGGTGTTAAATAA

Protein sequence

MGESNGEIDNLPVTILRACKEFNGAFFGSMNDDDVSEKELMDGAEESEEFKFFLKLFTENENLRRYYENHYGDGEFTCLACQLAGRKIKSFKTCSRLLQHSTHLGKNNTQNQGQKPQKTEVLKTGMLAHRAYTLVVCKVLGCDIEMLPAIVLEGEALGRSLTKSDVSKDKSVGKMQSSNTDDIVEDDSILEGVK*

Homology

[Close]

BLAST of Cucsa.057650 vs. TrEMBL
Match: A0A0A0L022_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G627140 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 1.2e-113
Identity = 206/213 (96.71%), Postives = 208/213 (97.65%), Query Frame = 1


Query: 1   MLQVGNADNSISGMGESDKEMDNFPVTVLRACKEFNAAFFGSMNDDDVSEKELMDGAEES 60
           MLQVGNADNSISGMGESD+EMDNFPVT+LRACKEFN AFFGSMNDDD SEKELMDGAEES
Sbjct: 376 MLQVGNADNSISGMGESDEEMDNFPVTILRACKEFNGAFFGSMNDDDASEKELMDGAEES 435

Query: 61  EEFKFFLKLFTENENLRRYYENHYGDGEFTCLACQVAGRKSKCFKTCRRLLQHSTHLGKN 120
           EEFKFFLKLFTENENLRRYYENHYGDGEFTCLACQVAGRKSKCFKTCRRLLQHSTHLGKN
Sbjct: 436 EEFKFFLKLFTENENLRRYYENHYGDGEFTCLACQVAGRKSKCFKTCRRLLQHSTHLGKN 495

Query: 121 NTQNQGQKPQKTKMLKTGMLAHRAYTLVVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVS 180
           NTQNQGQKPQKTKMLKTGMLAHRAYTLVVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVS
Sbjct: 496 NTQNQGQKPQKTKMLKTGMLAHRAYTLVVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVS 555

Query: 181 KLQDKSVGKMQSSITDDNVEDDSTKVNELEGIK 214
           K  DKSVGKMQSSI DDNVEDDSTKVNELEGIK
Sbjct: 556 K--DKSVGKMQSSIMDDNVEDDSTKVNELEGIK 586

[Close]

BLAST of Cucsa.057650 vs. TrEMBL
Match: A0A0A0L022_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G627140 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-20
Identity = 68/184 (36.96%), Postives = 98/184 (53.26%), Query Frame = 1


Query: 31  ACKEFNAAFFGSMNDDDVSEKELMDGAE-ESEEFKFFLKLFTENENLRRYYENHYGDGEF 90
           AC+EF A    S +D++  E++  D    ES+E+KFFLK+F ENE LR YYE +   G F
Sbjct: 182 ACREFFARNADSESDEEEEEEDEDDWEMMESKEYKFFLKMFVENEELRVYYEKNCESGLF 241

Query: 91  TCLACQVAGRK--SKCFKTCRRLLQHSTHLGKNNTQNQGQKPQKTKMLKTGMLAHRAYTL 150
            CL C   G+K   K F+ C  L+QHS  + +   +                 AHRA+ L
Sbjct: 242 CCLVCGGMGKKKSGKRFENCLGLVQHSLSISRTKKKR----------------AHRAFGL 301

Query: 151 VVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVSKLQDKSVG-KMQSSITDDNVEDDSTKV 210
           VV +V G D++ LP +VLKGE L  SL  S   K+Q + +    +  +   NV +D  K+
Sbjct: 302 VVSRVFGWDVDRLPTIVLKGEPLSRSLANSGDLKVQLEEIHVDNEYEVVSVNVNEDEQKL 349

HSP 2 Score: 332.0 bits (850), Expect = 5.3e-88
Identity = 167/197 (84.77%), Postives = 178/197 (90.36%), Query Frame = 1


Query: 17  SDKEMDNFPVTVLRACKEFNAAFFGSMNDDDVSEKELMDGAEESEEFKFFLKLFTENENL 76
           + K++ +  VT+LRACKEFN AFFGSMNDDD SEKELMDGAEESEEFKFFLKLFTENENL
Sbjct: 355 NSKDLISGEVTILRACKEFNGAFFGSMNDDDASEKELMDGAEESEEFKFFLKLFTENENL 414

Query: 77  RRYYENHYGDGEFTCLACQVAGRKSKCFKTCRRLLQHSTHLGKNNTQNQGQKPQKTKMLK 136
           RRYYENHYGDGEFTCLAC++AGRK K FKTC RLLQHSTHLGKNNTQNQGQKPQKTKMLK
Sbjct: 415 RRYYENHYGDGEFTCLACKLAGRKMKSFKTCSRLLQHSTHLGKNNTQNQGQKPQKTKMLK 474

Query: 137 TGMLAHRAYTLVVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVSKLQDKSVGKMQSSITD 196
           TGMLAHRAYTLVVCKVLGCDIEMLPA+VL+GEALG SLTKS+VSK  DKSVGKMQSS TD
Sbjct: 475 TGMLAHRAYTLVVCKVLGCDIEMLPAIVLEGEALGRSLTKSDVSK--DKSVGKMQSSNTD 534

Query: 197 DNVEDDSTKVNELEGIK 214
           D VEDDS     LEG+K
Sbjct: 535 DIVEDDSV----LEGVK 545

[Close]

BLAST of Cucsa.057650 vs. TrEMBL
Match: A0A0A0L218_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G627150 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.6e-20
Identity = 71/183 (38.80%), Postives = 99/183 (54.10%), Query Frame = 1


Query: 31  ACKEFNAAFFGSMNDDDVSEKELMDGAE-ESEEFKFFLKLFTENENLRRYYENHYGDGEF 90
           AC+EF A    S +D++  E++  D    ES+E+KFFLK+F ENE LR YYE +   G F
Sbjct: 182 ACREFFARNADSESDEEEEEEDEDDWEMMESKEYKFFLKMFVENEELRVYYEKNCESGLF 241

Query: 91  TCLACQVAGRK--SKCFKTCRRLLQHSTHLGKNNTQNQGQKPQKTKMLKTGMLAHRAYTL 150
            CL C   G+K   K FK C  L+QHS  +        G K ++         AHRA+ L
Sbjct: 242 CCLVCGGMGKKKSGKRFKNCLGLVQHSISI-------SGTKKKR---------AHRAFGL 301

Query: 151 VVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVSKLQDKSVGKMQSSITDDNVEDDSTKVN 210
           VV +V G D++ LP +VLKGE L  SL  S   K ++  V   +  +   NV +D  K+ 
Sbjct: 302 VVSRVFGWDVDRLPTIVLKGEPLSRSLANSGDLKPEEIHVDN-KYEVVSVNVNEDEQKLE 347

HSP 2 Score: 128.3 bits (321), Expect = 1.2e-26
Identity = 86/184 (46.74%), Postives = 107/184 (58.15%), Query Frame = 1


Query: 28  VLRACKEFNAAFFGSMND--DDVSEKELMDG--AEESEEFKFFLKLFTENENLRRYYENH 87
           +L AC+EF     GS  D  DD  E +LMD   +++SE FKFFLK+FTEN  LR YYE +
Sbjct: 61  ILDACQEFFVKSSGSDRDESDDEDEDDLMDEDRSDKSEVFKFFLKVFTENSELRSYYEKY 120

Query: 88  YGDGEFTCLACQVAGRKS-KCFKTCRRLLQHSTHLGKNNTQNQGQKPQKTKMLKTGMLAH 147
             DGEF CL C   G+K  K FK C  LLQHST +             KTK  +    AH
Sbjct: 121 SADGEFCCLVCGGIGKKVWKRFKDCHGLLQHSTGI------------LKTKKKR----AH 180

Query: 148 RAYTLVVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVSKLQDKSVGKMQSSITDDNVEDD 207
           RA+  VVCKVLG DI+ LP +VLKGE L  SL+KS VS+    S  +  ++   +NV+D 
Sbjct: 181 RAFGQVVCKVLGWDIDCLPMIVLKGEPLSHSLSKSGVSQ---TSPNEDDANKHINNVQDG 225

[Close]

BLAST of Cucsa.057650 vs. TrEMBL
Match: V4TQM8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024254mg PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.0e-26
Identity = 80/160 (50.00%), Postives = 97/160 (60.62%), Query Frame = 1


Query: 28  VLRACKEFNAAFFGSMND--DDVSEKELMDG--AEESEEFKFFLKLFTENENLRRYYENH 87
           +L AC+EF     GS  D  DD  E +LMD   +++SE FKFFLK+FTEN  LR YYE +
Sbjct: 69  ILDACQEFFVKSSGSDRDESDDEDEDDLMDEDRSDKSEVFKFFLKVFTENSELRSYYEKY 128

Query: 88  YGDGEFTCLACQVAGRKS-KCFKTCRRLLQHSTHLGKNNTQNQGQKPQKTKMLKTGMLAH 147
             DGEF CL C   G+K  K FK C  LLQHST +             KTK  +    AH
Sbjct: 129 SADGEFCCLVCGGIGKKVWKRFKDCHGLLQHSTGI------------LKTKKKR----AH 188

Query: 148 RAYTLVVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVSKL 183
           RA+  VVCKVLG DI+ LP +VLKGE L  SL+KS VS++
Sbjct: 189 RAFGQVVCKVLGWDIDCLPMIVLKGEPLSHSLSKSGVSQV 212

[Close]

BLAST of Cucsa.057650 vs. TrEMBL
Match: A0A067DZF0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007382mg PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.0e-26
Identity = 80/160 (50.00%), Postives = 97/160 (60.62%), Query Frame = 1


Query: 28  VLRACKEFNAAFFGSMND--DDVSEKELMDG--AEESEEFKFFLKLFTENENLRRYYENH 87
           +L AC+EF     GS  D  DD  E +LMD   +++SE FKFFLK+FTEN  LR YYE +
Sbjct: 61  ILDACQEFFVKSSGSDRDESDDEDEDDLMDEDRSDKSEVFKFFLKVFTENSELRSYYEKY 120

Query: 88  YGDGEFTCLACQVAGRKS-KCFKTCRRLLQHSTHLGKNNTQNQGQKPQKTKMLKTGMLAH 147
             DGEF CL C   G+K  K FK C  LLQHST +             KTK  +    AH
Sbjct: 121 SADGEFCCLVCGGIGKKVWKRFKDCHGLLQHSTGI------------LKTKKKR----AH 180

Query: 148 RAYTLVVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVSKL 183
           RA+  VVCKVLG DI+ LP +VLKGE L  SL+KS VS++
Sbjct: 181 RAFGQVVCKVLGWDIDCLPMIVLKGEPLSHSLSKSGVSQV 204

[Close]

BLAST of Cucsa.057650 vs. TAIR10
Match: AT1G78810.1 (AT1G78810.1 unknown protein)

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 50/151 (33.11%), Postives = 73/151 (48.34%), Query Frame = 1


Query: 55  DGAEE------SEEFKFFLKLFTENENLRRYYENHYGDGEFTCLACQVAGRKS--KCFKT 114
           DG EE      SEE +   K+F+EN  L+ YYE +Y  G F CL C  A  K   K FK 
Sbjct: 334 DGTEENGDENLSEELELISKVFSENVELKSYYEKNYEGGAFICLVCCAATDKKMLKRFKH 393

Query: 115 CRRLLQHSTHLGKNNTQNQGQKPQKTKMLKTGMLAHRAYTLVVCKVLGCDIEMLPAVVLK 174
           C  ++QH                  TK+ K  + AH+ +   VC++LG D E+LP  V+K
Sbjct: 394 CYGVVQHC-----------------TKVPKMKIRAHKVFAQFVCELLGWDFELLPRRVMK 453

Query: 175 GEALGCSLTKSEVSKLQDKSVGKMQSSITDD 198
           G A   SL  S  ++  + +   ++  + +D
Sbjct: 454 GVA---SLAISNANENNENTSSMVEEHMCED 464

HSP 2 Score: 73.2 bits (178), Expect = 2.2e-13
Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 1


Query: 44  NDDDVSEKELMDGAEESEEFKFFLKLFTENENLRRYYENHYGDGEFTCLACQVAGRKS-K 103
           ++D   EKE    +  S+EF+F  ++F EN  L+ YYE + G+GEF CL C   G KS +
Sbjct: 170 DEDQSLEKE---ESSSSKEFQFLSRVFEENVKLKEYYEKNTGNGEFWCLVCGGIGEKSCR 229

Query: 104 CFKTCRRLLQHSTHLGKNNTQNQGQKPQKTKMLKTGMLAHRAYTLVVCKVLGCDI 158
            FK+C  L+QHS  + K + + Q                HRA   VVC VLG D+
Sbjct: 230 KFKSCLALIQHSLTIHKTDLKIQ----------------HRALAQVVCNVLGWDV 265

[Close]

BLAST of Cucsa.057650 vs. NCBI nr
Match: gi|700199905|gb|KGN55063.1| (hypothetical protein Csa_4G627140 [Cucumis sativus])

HSP 1 Score: 417.2 bits (1071), Expect = 1.8e-113
Identity = 206/213 (96.71%), Postives = 208/213 (97.65%), Query Frame = 1


Query: 1   MLQVGNADNSISGMGESDKEMDNFPVTVLRACKEFNAAFFGSMNDDDVSEKELMDGAEES 60
           MLQVGNADNSISGMGESD+EMDNFPVT+LRACKEFN AFFGSMNDDD SEKELMDGAEES
Sbjct: 376 MLQVGNADNSISGMGESDEEMDNFPVTILRACKEFNGAFFGSMNDDDASEKELMDGAEES 435

Query: 61  EEFKFFLKLFTENENLRRYYENHYGDGEFTCLACQVAGRKSKCFKTCRRLLQHSTHLGKN 120
           EEFKFFLKLFTENENLRRYYENHYGDGEFTCLACQVAGRKSKCFKTCRRLLQHSTHLGKN
Sbjct: 436 EEFKFFLKLFTENENLRRYYENHYGDGEFTCLACQVAGRKSKCFKTCRRLLQHSTHLGKN 495

Query: 121 NTQNQGQKPQKTKMLKTGMLAHRAYTLVVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVS 180
           NTQNQGQKPQKTKMLKTGMLAHRAYTLVVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVS
Sbjct: 496 NTQNQGQKPQKTKMLKTGMLAHRAYTLVVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVS 555

Query: 181 KLQDKSVGKMQSSITDDNVEDDSTKVNELEGIK 214
           K  DKSVGKMQSSI DDNVEDDSTKVNELEGIK
Sbjct: 556 K--DKSVGKMQSSIMDDNVEDDSTKVNELEGIK 586

[Close]

BLAST of Cucsa.057650 vs. NCBI nr
Match: gi|700199905|gb|KGN55063.1| (hypothetical protein Csa_4G627140 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 3.0e-20
Identity = 68/184 (36.96%), Postives = 98/184 (53.26%), Query Frame = 1


Query: 31  ACKEFNAAFFGSMNDDDVSEKELMDGAE-ESEEFKFFLKLFTENENLRRYYENHYGDGEF 90
           AC+EF A    S +D++  E++  D    ES+E+KFFLK+F ENE LR YYE +   G F
Sbjct: 182 ACREFFARNADSESDEEEEEEDEDDWEMMESKEYKFFLKMFVENEELRVYYEKNCESGLF 241

Query: 91  TCLACQVAGRK--SKCFKTCRRLLQHSTHLGKNNTQNQGQKPQKTKMLKTGMLAHRAYTL 150
            CL C   G+K   K F+ C  L+QHS  + +   +                 AHRA+ L
Sbjct: 242 CCLVCGGMGKKKSGKRFENCLGLVQHSLSISRTKKKR----------------AHRAFGL 301

Query: 151 VVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVSKLQDKSVG-KMQSSITDDNVEDDSTKV 210
           VV +V G D++ LP +VLKGE L  SL  S   K+Q + +    +  +   NV +D  K+
Sbjct: 302 VVSRVFGWDVDRLPTIVLKGEPLSRSLANSGDLKVQLEEIHVDNEYEVVSVNVNEDEQKL 349

HSP 2 Score: 356.3 bits (913), Expect = 3.7e-95
Identity = 177/212 (83.49%), Postives = 189/212 (89.15%), Query Frame = 1


Query: 2   LQVGNADNSISGMGESDKEMDNFPVTVLRACKEFNAAFFGSMNDDDVSEKELMDGAEESE 61
           LQV NADNSISGMGES+ EMDN  VT+LRACKEF AAFF SMNDDDVSEKE  DGAEE E
Sbjct: 322 LQVENADNSISGMGESNGEMDNLHVTILRACKEFQAAFFRSMNDDDVSEKESTDGAEERE 381

Query: 62  EFKFFLKLFTENENLRRYYENHYGDGEFTCLACQVAGRKSKCFKTCRRLLQHSTHLGKNN 121
           EFKFFLKLFTENENLRRYYENHYGDGEFTCLAC+VAGRK KCFKTC RLLQHST LGKNN
Sbjct: 382 EFKFFLKLFTENENLRRYYENHYGDGEFTCLACEVAGRKVKCFKTCSRLLQHSTQLGKNN 441

Query: 122 TQNQGQKPQKTKMLKTGMLAHRAYTLVVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVSK 181
            + QGQKPQKTK+LK GMLAHRAYT VVCKVLGCDI+MLPA+VL GEALG SLTKS+VSK
Sbjct: 442 IEKQGQKPQKTKVLKMGMLAHRAYTSVVCKVLGCDIKMLPAIVLNGEALGLSLTKSDVSK 501

Query: 182 LQDKSVGKMQSSITDDNVEDDSTKVNELEGIK 214
           LQDKS  +MQSS  DD VEDDST+VNELEG++
Sbjct: 502 LQDKSDVQMQSSNADDIVEDDSTEVNELEGVE 533

[Close]

BLAST of Cucsa.057650 vs. NCBI nr
Match: gi|659127518|ref|XP_008463745.1| (PREDICTED: uncharacterized protein LOC103501816 isoform X1 [Cucumis melo])

HSP 1 Score: 106.7 bits (265), Expect = 5.2e-20
Identity = 70/184 (38.04%), Postives = 100/184 (54.35%), Query Frame = 1


Query: 31  ACKEFNAAFFGSMNDDDVSEKELMDGAE-ESEEFKFFLKLFTENENLRRYYENHYGDGEF 90
           AC++F A    S +D++  E+E  DG   ES+E+ FFLK+F ENE LR YYE +   G F
Sbjct: 127 ACRKFFARNADSGSDEEEEEEEEDDGEMMESKEYTFFLKMFVENEELRVYYEKNCESGLF 186

Query: 91  TCLACQVAGRK--SKCFKTCRRLLQHSTHLGKNNTQNQGQKPQKTKMLKTGMLAHRAYTL 150
            CL C   G+K   K FK C  L+QHS  +        G K ++         AHRA+  
Sbjct: 187 CCLVCVGMGKKKFGKKFKNCLALVQHSISI-------SGTKKKR---------AHRAFGH 246

Query: 151 VVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVSKLQDKSVG-KMQSSITDDNVEDDSTKV 210
           VV +V G DI+ LP +VLKGE L  SL  S   K+Q + +    ++ +   +V +D  K+
Sbjct: 247 VVSRVFGWDIDRLPTIVLKGEPLSRSLANSGDLKVQPEEIHVDNKNEVVSVSVNEDEQKL 294

HSP 2 Score: 356.3 bits (913), Expect = 3.7e-95
Identity = 177/212 (83.49%), Postives = 189/212 (89.15%), Query Frame = 1


Query: 2   LQVGNADNSISGMGESDKEMDNFPVTVLRACKEFNAAFFGSMNDDDVSEKELMDGAEESE 61
           LQV NADNSISGMGES+ EMDN  VT+LRACKEF AAFF SMNDDDVSEKE  DGAEE E
Sbjct: 320 LQVENADNSISGMGESNGEMDNLHVTILRACKEFQAAFFRSMNDDDVSEKESTDGAEERE 379

Query: 62  EFKFFLKLFTENENLRRYYENHYGDGEFTCLACQVAGRKSKCFKTCRRLLQHSTHLGKNN 121
           EFKFFLKLFTENENLRRYYENHYGDGEFTCLAC+VAGRK KCFKTC RLLQHST LGKNN
Sbjct: 380 EFKFFLKLFTENENLRRYYENHYGDGEFTCLACEVAGRKVKCFKTCSRLLQHSTQLGKNN 439

Query: 122 TQNQGQKPQKTKMLKTGMLAHRAYTLVVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVSK 181
            + QGQKPQKTK+LK GMLAHRAYT VVCKVLGCDI+MLPA+VL GEALG SLTKS+VSK
Sbjct: 440 IEKQGQKPQKTKVLKMGMLAHRAYTSVVCKVLGCDIKMLPAIVLNGEALGLSLTKSDVSK 499

Query: 182 LQDKSVGKMQSSITDDNVEDDSTKVNELEGIK 214
           LQDKS  +MQSS  DD VEDDST+VNELEG++
Sbjct: 500 LQDKSDVQMQSSNADDIVEDDSTEVNELEGVE 531

[Close]

BLAST of Cucsa.057650 vs. NCBI nr
Match: gi|659127522|ref|XP_008463747.1| (PREDICTED: uncharacterized protein LOC103501816 isoform X3 [Cucumis melo])

HSP 1 Score: 105.1 bits (261), Expect = 1.5e-19
Identity = 70/183 (38.25%), Postives = 99/183 (54.10%), Query Frame = 1


Query: 31  ACKEFNAAFFGSMNDDDVSEKELMDGAE-ESEEFKFFLKLFTENENLRRYYENHYGDGEF 90
           AC++F A    S +D++  E+E  DG   ES+E+ FFLK+F ENE LR YYE +   G F
Sbjct: 127 ACRKFFARNADSGSDEEEEEEEEDDGEMMESKEYTFFLKMFVENEELRVYYEKNCESGLF 186

Query: 91  TCLACQVAGRK--SKCFKTCRRLLQHSTHLGKNNTQNQGQKPQKTKMLKTGMLAHRAYTL 150
            CL C   G+K   K FK C  L+QHS  +        G K ++         AHRA+  
Sbjct: 187 CCLVCVGMGKKKFGKKFKNCLALVQHSISI-------SGTKKKR---------AHRAFGH 246

Query: 151 VVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVSKLQDKSVGKMQSSITDDNVEDDSTKVN 210
           VV +V G DI+ LP +VLKGE L  SL  S   K ++  V   ++ +   +V +D  K+ 
Sbjct: 247 VVSRVFGWDIDRLPTIVLKGEPLSRSLANSGDLKPEEIHVDN-KNEVVSVSVNEDEQKLE 292

HSP 2 Score: 347.8 bits (891), Expect = 1.3e-92
Identity = 175/212 (82.55%), Postives = 187/212 (88.21%), Query Frame = 1


Query: 2   LQVGNADNSISGMGESDKEMDNFPVTVLRACKEFNAAFFGSMNDDDVSEKELMDGAEESE 61
           LQV NADNSISGMGES+ EMDN  VT+LRACKEF AAFF SMNDDDVSEKE  DGAEE E
Sbjct: 322 LQVENADNSISGMGESNGEMDNLHVTILRACKEFQAAFFRSMNDDDVSEKESTDGAEERE 381

Query: 62  EFKFFLKLFTENENLRRYYENHYGDGEFTCLACQVAGRKSKCFKTCRRLLQHSTHLGKNN 121
           EFKFFLKLFTENENLRRYYENHYGDGEFTCLAC+VAGRK KCFKTC RLLQHST LGKNN
Sbjct: 382 EFKFFLKLFTENENLRRYYENHYGDGEFTCLACEVAGRKVKCFKTCSRLLQHSTQLGKNN 441

Query: 122 TQNQGQKPQKTKMLKTGMLAHRAYTLVVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVSK 181
            + QGQKPQKTK+LK GMLAHRAYT VVCKVLGCDI+MLPA+VL GEALG SLTKS+VSK
Sbjct: 442 IEKQGQKPQKTKVLKMGMLAHRAYTSVVCKVLGCDIKMLPAIVLNGEALGLSLTKSDVSK 501

Query: 182 LQDKSVGKMQSSITDDNVEDDSTKVNELEGIK 214
             DKS  +MQSS  DD VEDDST+VNELEG++
Sbjct: 502 --DKSDVQMQSSNADDIVEDDSTEVNELEGVE 531

[Close]

BLAST of Cucsa.057650 vs. NCBI nr
Match: gi|659127520|ref|XP_008463746.1| (PREDICTED: uncharacterized protein LOC103501816 isoform X2 [Cucumis melo])

HSP 1 Score: 106.7 bits (265), Expect = 5.2e-20
Identity = 70/184 (38.04%), Postives = 100/184 (54.35%), Query Frame = 1


Query: 31  ACKEFNAAFFGSMNDDDVSEKELMDGAE-ESEEFKFFLKLFTENENLRRYYENHYGDGEF 90
           AC++F A    S +D++  E+E  DG   ES+E+ FFLK+F ENE LR YYE +   G F
Sbjct: 127 ACRKFFARNADSGSDEEEEEEEEDDGEMMESKEYTFFLKMFVENEELRVYYEKNCESGLF 186

Query: 91  TCLACQVAGRK--SKCFKTCRRLLQHSTHLGKNNTQNQGQKPQKTKMLKTGMLAHRAYTL 150
            CL C   G+K   K FK C  L+QHS  +        G K ++         AHRA+  
Sbjct: 187 CCLVCVGMGKKKFGKKFKNCLALVQHSISI-------SGTKKKR---------AHRAFGH 246

Query: 151 VVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVSKLQDKSVG-KMQSSITDDNVEDDSTKV 210
           VV +V G DI+ LP +VLKGE L  SL  S   K+Q + +    ++ +   +V +D  K+
Sbjct: 247 VVSRVFGWDIDRLPTIVLKGEPLSRSLANSGDLKVQPEEIHVDNKNEVVSVSVNEDEQKL 294

HSP 2 Score: 340.5 bits (872), Expect = 2.1e-90
Identity = 169/197 (85.79%), Postives = 180/197 (91.37%), Query Frame = 1


Query: 17  SDKEMDNFPVTVLRACKEFNAAFFGSMNDDDVSEKELMDGAEESEEFKFFLKLFTENENL 76
           + K++ +  VT+LRACKEFN AFFGSMNDDD SEKELMDGAEESEEFKFFLKLFTENENL
Sbjct: 303 NSKDLISGEVTILRACKEFNGAFFGSMNDDDASEKELMDGAEESEEFKFFLKLFTENENL 362

Query: 77  RRYYENHYGDGEFTCLACQVAGRKSKCFKTCRRLLQHSTHLGKNNTQNQGQKPQKTKMLK 136
           RRYYENHYGDGEFTCLAC++AGRK K FKTC RLLQHSTHLGKNNTQNQGQKPQKTKMLK
Sbjct: 363 RRYYENHYGDGEFTCLACKLAGRKMKSFKTCSRLLQHSTHLGKNNTQNQGQKPQKTKMLK 422

Query: 137 TGMLAHRAYTLVVCKVLGCDIEMLPAVVLKGEALGCSLTKSEVSKLQDKSVGKMQSSITD 196
           TGMLAHRAYTLVVCKVLGCDIEMLPA+VL+GEALG SLTKS+VSKLQDKSVGKMQSS TD
Sbjct: 423 TGMLAHRAYTLVVCKVLGCDIEMLPAIVLEGEALGRSLTKSDVSKLQDKSVGKMQSSNTD 482

Query: 197 DNVEDDSTKVNELEGIK 214
           D VEDDS     LEG+K
Sbjct: 483 DIVEDDSV----LEGVK 495

The following BLAST results are available for this feature:

BLAST of Cucsa.057650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L022_CUCSA	1.2e-113	96.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G627140 PE=4 SV=1	[more]
A0A0A0L022_CUCSA	2.1e-20	36.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G627140 PE=4 SV=1	[more]
A0A0A0L218_CUCSA	1.6e-20	38.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G627150 PE=4 SV=1	[more]
V4TQM8_9ROSI	2.0e-26	50.00	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024254mg PE=4 SV=1	[more]
A0A067DZF0_CITSI	2.0e-26	50.00	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007382mg PE=4 SV=1	[more]

BLAST of Cucsa.057650 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78810.1	1.0e-13	33.11	unknown protein	[more]

BLAST of Cucsa.057650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700199905\|gb\|KGN55063.1\|	1.8e-113	96.71	hypothetical protein Csa_4G627140 [Cucumis sativus]	[more]
gi\|700199905\|gb\|KGN55063.1\|	3.0e-20	36.96	hypothetical protein Csa_4G627140 [Cucumis sativus]	[more]
gi\|659127518\|ref\|XP_008463745.1\|	5.2e-20	38.04	PREDICTED: uncharacterized protein LOC103501816 isoform X1 [Cucumis melo]	[more]
gi\|659127522\|ref\|XP_008463747.1\|	1.5e-19	38.25	PREDICTED: uncharacterized protein LOC103501816 isoform X3 [Cucumis melo]	[more]
gi\|659127520\|ref\|XP_008463746.1\|	5.2e-20	38.04	PREDICTED: uncharacterized protein LOC103501816 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.057650.3	Cucsa.057650.3	mRNA
Cucsa.057650.4	Cucsa.057650.4	mRNA
Cucsa.057650.5	Cucsa.057650.5	mRNA
Cucsa.057650.6	Cucsa.057650.6	mRNA
Cucsa.057650.7	Cucsa.057650.7	mRNA
Cucsa.057650.1	Cucsa.057650.1	mRNA
Cucsa.057650.2	Cucsa.057650.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34546	FAMILY NOT NAMED	coord: 1..79 score: 3.4E-28coord: 99..159 score: 3.4
None	No IPR available	PANTHER	PTHR34546:SF3	SUBFAMILY NOT NAMED	coord: 99..159 score: 3.4E-28coord: 1..79 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.057650	Cla023328	Watermelon (97103) v1	cgywmB047
Cucsa.057650	Csa4G627140	Cucumber (Chinese Long) v2	cgycuB042
Cucsa.057650	MELO3C025643	Melon (DHL92) v3.5.1	cgymeB042
Cucsa.057650	ClCG11G017430	Watermelon (Charleston Gray)	cgywcgB047
Cucsa.057650	CSPI04G22860	Wild cucumber (PI 183967)	cgycpiB043
Cucsa.057650	CmaCh09G008230	Cucurbita maxima (Rimu)	cgycmaB0077
Cucsa.057650	CmoCh09G008180	Cucurbita moschata (Rifu)	cgycmoB0072
Cucsa.057650	Lsi04G020100	Bottle gourd (USVL1VR-Ls)	cgylsiB047
Cucsa.057650	Cp4.1LG06g06470	Cucurbita pepo (Zucchini)	cgycpeB0075
Cucsa.057650	MELO3C025643.2	Melon (DHL92) v3.6.1	cgymedB042
Cucsa.057650	CsaV3_4G033090	Cucumber (Chinese Long) v3	cgycucB045
Cucsa.057650	Cla97C11G223520	Watermelon (97103) v2	cgywmbB046
Cucsa.057650	Bhi09G002874	Wax gourd	cgywgoB048
Cucsa.057650	Carg17062	Silver-seed gourd	carcgyB0207

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.057650	Cucurbita maxima (Rimu)	cgycmaB0078
Cucsa.057650	Cucurbita moschata (Rifu)	cgycmoB0073
Cucsa.057650	Cucurbita pepo (Zucchini)	cgycpeB0073
Cucsa.057650	Silver-seed gourd	carcgyB0363