Cucsa.054690 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.054690
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	DNA polymerase epsilon subunit 2
Location	scaffold00585 : 227296 .. 238217 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAGAAAGTTGGAGAAAAAGTGAAGCAAAGTCTCAACCTAGAAGAATGAGCAGAAAGATAGGAGAATAGGTTGAGCCTCAGCGACTGAAACAGGTACGGCAACTTCCCCAACTGCTGAAACCCGGATACAGGAAGGAGAAGAACGGCTACGTGGACTGAGGCAGCTTCTAATGGCGCCGACTGATGGTTTGTGCGTCTTCTTATTGAAGTGTGAAATATGAGCTACTTGCTGACTCCCACTGGGTGGTAGGCTCTGGCCGGGTACCAAGAATTGAGTGAATATAGTGGGTTGGAAATCTTTGATCAAGTCAAGAGACCTTTCTCATTCCCGCAAGGACACAAGTACTTCTCCAACAAGAACTGAGAGCTACAGGAACAAGAACTAGCGGGACAAGAACTTAGTCAACACGAACAGCTACTGCAAGAGCGGCCTCTTGCCCTTGGACCACTCAAAATCAGGGAGCCACAAGGTTCGGATCCGTAGTAGTCTTTTCTTCTTCTTCCTATTCATTTGTTCTTTTTCTTCCTTTAACTGAAAACCTTTAACTGCGTTTTCTTGTTGGACTGATTACAATTGTATCTAGTAGAGCCAAAAAAGAATTTCGTCGTGAATCAACCCTCCATTTTCCAACCCCATCATCATTCCTTCACAATTATTGTGCAGAATTGCAGATTGTCTCACAGAAGAATGGACACATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTGGAAGCTCTTGACGAGATTGTTTCCTTTGTCTCTCGTTCCCATGGCTTCGAAGATGAAGCTATAGAATTTGTTCTTGACAATCTCCATGAAGAATCTTGTACTGTTCCTTCTTCTTTCATACTACGATTATATCTTCTTTGCAATTCACCTCATTCCTTTTCATGGACAGTTTCTTTGTTTTGGCTATTGTGGCAGTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGAGTTATCAGCATTATGGTTGCAGCTGATAAAGTGGGAGAAGAAAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTGATATCCCCAAGTTTCGTTATGATCCCATAAAAAAGATCTTTCTGTATGGTTTTCTCCCATTTATATTTATTTTTAATAGTTGTTAAACTAAGCATACCTGGTTAAGCATATACCTTGGGCCAAGAAGTCAGCAAAATCTCTCATTCCCATGTGTTGTTGAATACTTGAACTAAAAAAAAACTACTAGTTGGGTTTTTGGGATAATTAGACGCGGATAACTAATGCAGCTCATTGCAAAAAAGAGAGATATAATGGATTTAACTGAGAACTATCATCATCAACATTCCTTTTCTCTGCACTTGAAATCACATGTTCTTGAACCATGTACATATATATTTTTAGGCACACAGAAAACCTTCCAATTCATGGAGATGCTTCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCTCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGGTACTCCATTTCTCTTGACCTATGAATTGATCATGTTAGCCTTTACAATTGAACATGAGCATTTACACTAATTTTGTTTGTGATGTGTTTCCCAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGATGGCCACTTCTACTTGGAAGACCTTACCGCATCTGTGGAAATTAATTTATCTAGTGCTATATCCTTTACTGGCAACTTCTATGATGTGGAAAAATCTGAACTTGTTTGATATTTGAAGATGACATGCCCTGCAGTTTTCATTAATAGTTAGCACAAGATAACTACAGGTCTATTTACAGAGAACACCATTATTGTAGCTGAAGGAGAGATGCTCGTGGAGGGTATTTTTCAGGTTTGTAGTACCACGTTTGCCTTCAAGTTCTGTATAAATAGGTGGTTGAAATTTCCCCTTAGTGTCCTATTAGGTATTTCTAAACCCCCTTGTTTATAGAGAGAACTTACTTTCTTAAAGACATATGTAGCGTTCATTATTCTATTTTCTCTACGGATCATCCAGTTTTCCTATTAGCTGTTGCCAGGATGTACTTTGCTTACGAAGTTTTCATATTTGATCAGATTATTATGCTTGGTTACCCTTTTAAAAGGTATTATCTTTGCATATTTCCCTATATTCTTTTCAAAAAAGCTTTGCAGTTTTGGCACTTTTAATGTATAGCAGTATTTTGTTTATACTGTAACTGCTTCCTAAGTTGAACGCTTTTTGAAGTTCTTACATGCTTATGAGATGATTTTTTTTTTACAATGCTATGGGATGGATCTTAGTTCTGTTTGGTCCTGATCAGAGTTTTGTGTAAAGATACTACAGAAATATCTTGATATATTGCTATTCCTCAACGATTACAATATGAAAATACTATATGAAACAGTAAAATGATCGCGAATGATCAATCATCAAAATTACAGCCACTAATTACTGAAGTAAATCAACAGACAGAAATTCCACAAACATTCTTTCCAAACAATAACAATGGAAAATAAGAAAAAACACAAGAACCCGAACCCTCTGCTTTCCTTTCCTGCGCAAGGAGGAATGCAGCCTCTCTTCTTCTCCAGAAAATACTCGATACCTCCTTCCTTTTCTTTACTTTCTTTTATTATGATTTGCTAACTAACTACTGTGCCCCACCAGAGTGGTCCCCATCTTCATTACCACCTCCTACACTCCCACGTGTGGCCTTACTGTTATTCTTATTTCTTCTACTATATTTAAACAATATTGGAGGCCTAGCATTTTGCATGCCTAAGTTATATTTCACGTAGTTCTCAATTGGTAAGTGGATAACACCATCTTGTAGTTGGTTATTTAATATTTCGTTAGGTATCCAGAAGTTGAAATTTACTTTTGAGAGATATGAAACCTTATTTTTGTAAACAATTTTTTTTTTTAGCGAGTTCCGCCCACAGTCTTCTCAAAAGGTTTTGAATCTTGATAACATGAGGTTGACATTTAAGCACAACAGATTTAAATATGCAAGTGTCCTGCCTTCATCCAAAGCATATTTACTATTCAAAATTGGATTTGCTTGTGGAATTTCATTCTTGTCCTTTACTTTCTTATTGTTTTCTAGCACAAGGATACTGATGGGATACCAGTTGTTCCCAATCCCAGTAGCTGAAAATCAAATACTACTGATATTACTAAGATGAAAATAACGATAATAACTACAGGACAATATCACCGAATTCGTTTATAGCCGATTCGATGGACACTCTTCCCTCTCCTGCTATCCTTTCTTTCAAGAATATACAGAAAGATAACTTCACCAAAAGAAAAGCTCCCAGTTCTCTCTTTCACTTCCTTATTTATATTCACTCCCCACCTACAGTGGTCCCCCTGTTTCATGTGTCGCTCCACTCATTGTGGTCCCCACATGCGGTTACATAACTAACTCCTCCTCCTGCTTCTCTTTCCTATTCTTTCTCCTACTGTATTGATGTATGATGGGTGGTCTAACATTGCATTCCCGGTCCAGTTTCACCTTGTCCTCAAGGTGGAAATCGGGGAAGGATTGCTGAAAGTCATCATAGTTTTCCCATGTTGCTTCATGATGCGGTAGACCCTTCCAACTCATTAAGACTTCCCATCCTCCTTTCTCGTTTTTCTGATAACCGAAGACCTCCTGAGGCACAGCTCTCCTTTTCCGCAGTGATACCTGCCTGTATGGCCTAATCTTTAGGAACACCTTATCGCCTTCTTCAAATTCGACATGTCTTCTCTTCATATCGGCACAACTCTTCATCTTTTCTTGGGCTATGCGTAAATGTTCCTTCAAAGCACCCAAGGCTACATCTCTTTCCTTAAGTTGCTCATCTAAAGCCGAGTTGGGAGTTTCACGATCTCCATAATATATCAGGGCTGGGGGTGTTCTTCCATAGACAGCTTGGAATGGTGACACGCCTAATGATCTTTGGAATGTAGTGTTATACCAGTATTCAGCCCAAGACAACCATTTCATCCAATCTTTCGGTTTTTGCCCACGGAAGCACCTTAAATAAATTTCTACAGATCTGTTGACCACCTCTGTCTATCCATCTGTCTAGGGGTGGTATGCTGTGCTTCGGTTCAACTTCGTACCAGCTAAACGAAACAACTCTTTCAAAAAATGACTCAGAAAGATCTTGTCTCGGTCAGGGACAATTGACTGTGGAAAGCCATGCAGTCTTACAACCTCCCGAACAATTCAGCTACCATCTTAGCGTCAAAAGGATGTTTAAGGCCGAGGAAGTGAGCATATTTATTGAAGCAATCCACCACTACGAATATTACTTCAAACCCCATTGATTTAGGCAGTCCTTCAATAAAATCCATGGATATATCCTCCCATACTCTATTTGGTATCTCTAGGGGGGTCAATAATCCTGCAGGTGACAATGCTAAAGTCTTATTCCGCTGACACGTAATACATTCTTCGCAATATTTTTTAACGTGAGCTTTCATTCCCACCCAAAACAACTCTCCTGTCAGCCTCTTATACGTTCTTAAGAACCCGGAATGACCTCCTAGGGCCGAGTCATGATATGTGTGCATAATAATAGGTATCAATGAAGAATTCTTCGCAATCACTAATCTCCCTTTGTATCTCAGTATTCCTTGTTGCAGAGTGTAATTCTTTACCTTCTCCTCCCTCTGAATCCTGTTGATTATATCTTGCAAGTAGTCATTCTTGTTAACCTCCTCTCTGATTACCTTTATGTCCACCAAGGTGGGGGCTGTTAGTTGGTTAAGATGGACAGTTGGTGGCACTCGTGAAAGGGCATCTGCTGCCTTGTTTTCCAAGCCCGGTTTATACACCACCTCAAATGAATAACCCAACAATTTTGCAATCCACTTCTGATATTGCGGTTGTATGACTCTCTGTTCCAGAAAGAACTTAAGTGATCGCTGATCTGTCTCAACTATGAATGTCCTTCCTAACAAATAGGGTCGCCAACGTTGGACTATCAATACTACTGCCATTAATTCCCTCTCGTATACTGGTTTGGTTCGGTCTCGCAAGGCTAGTGTATGGCTATAAAAAGCAATTGGTCTCTTGTTCTGCATTAGCACTGCCCCTACCCCATAGCCTGACGCATCTGTATCTACTTCGAATGGTGCATTAAAATCTGGAAGAGCTAATATAGGCAAGGCCATCATTGCTCGTTGAAGCTTTTCAAACGCTTCTTGTGCTCCCTCATTCCATTTAAATGATCCCAGCTTCAGTAGTTGAGTTAGAGGTGCCGCTATGGACCCATAGTGCTGTACAAAACGGCGGTAGTAACCAGTCAACCCCAGAAACCCTCTAACTTCCCGAACATTTGTTGGAGTTGGCCGTTGCTTGATTGCTCTAATTTTTTCAGGATTGACTTCTACTCCCTTTCCTGACAATGTGTCCCAAATGCTCCACATTTTAGTACGCAAAGCTGCATTTCTTTCTATTAGCAAACAGTTTATGCCTCCTCAATTCTTCCAGAACTAATTCAATGTGCTGACAATGTTCCTCTAAGTTCCTACTATAGACCAGTATATCATCGAGGAAGACCAAGACGAACTTCCTCAAGTACGATCTAAAAACCGAATTCATTAGTGATTGGAAAGTTTCTGGTGCGTTTGTGAGTCCAAACGGCATCACCAAAAACTCATAATGTCCTTCGTGAGTTCTAAAGGCCGTTTTCTCTATATCTTGACTGCACATTCTAATTGATGATATCCCGCTTTCAAGTCAATTTTGGAGAATAGATTTGCACCATTTAGCTCGTCGAACAGTTCTTCCACAACAGGGATAGGAAACTTATCTGGAATAGTTATGTTATTGAGTGCCCTGTAGTCCACGCAGAATCGCCAACTTCCGTCCTTCTTGACCAATAATACGGGGCTTGAGTAGGGGCTTGTGCTGGGACGGATAATTCCTGAGGTTAGCATTTCGTCCACCAATTTTTCCATTTCCTCCTTCTGCTGAAAAGCATACCGATAAGGCCTGACATTCACCGGATCTGCCCCTCCCCTTACGTGTATATGATGTTCGATATCCCTTCTTGGAGGTAATTCTTTGGGCCAATCGAAAACGTCATTATACTGTTTCAAGGCTGTTAGTATGCTCTCAGGTATGTTATTACTCTCTTCTGGCTCTATCTCGGCTATGTGGGCTTCCAAGGTTCTGCACTCAATCAAGTATCCCATGTCTGACTCAGTCCACGATTTAGTTAAATTCTTCAAGCTCACTTGAGTTTTGGTTAGGCTTGGATCCCCTTTTATCACTATTTTTCTGTTGTCATGGAAAAATGACATGGTTAAGTTCTTTCAGTCCATCTCAGTCACTCCCAATGAGTGTAACCATTGCATCCCAAGTATCACGTCTACCCCTCCCAGTTCCAGTGGTAGGAAGTTTTCAAGGACTGTCCACCCATTGAGATCCAACTTTACTTTTTCACACACTCCCTTGCCTTTGATGGCTGTTCCTAACCCAAGTATTACCCCATAGTTAGAAGTATCCTTTGTGGGTAATTTCAGTGTCATCACTAGTCGGTCGGATATGAAATTGTGGGTGGCTCCGCAATCCACTAGCACGACAACCTCCTTACTTTGAATTGTTCCCCTTATCTTCATGGTACTCGGATTCGTCAATCCCACTACCGAGTTAATATATAACTCCACTACTTCCCCAAGGTCATTCTGCAACTCAATAGTTTTCAATTCCTTCAAGTCATACTCGTCTTCCTCAATAATTTCTTCCTCCACGTCGTCCGCTCTTACCACGAACATACATAACTCACGTATTTCCTTCACCCTGCATTTGTGCCTGGAGTAATACTTCTCATCACATTTGAAACAGAGTCCTTTCTCCCTCTTGGCCTGGAATTCTGCGTCGAAAAGCCGTTTGGATGGTCCTTCTTTCTTAATCTCCTTTGCCGGTGATCCCCTCAGTATGATTGTTCGTATCGAAAATACCGTGTTCTCCTTATTCCCCTGTTCTTTTATAATTGAATTTGTTTTGGCCGTATTATAGGGGTAATTTGGAACTTTCGCTCCAGAATAACCGGGTAAATTTGCTTATCTCCTCAGGATCTTCCAATGTTCCACCATTTGCGCGTATCTCATCATCTCCGCTAATCCCACGGGATTGCAGAATTCCATCTCCACCTTAATCCACGGTAACAGCCCTCCCATGAACGTCTCTTCCACAATCTTTTTCGGAATGTCCGATCGGTGCCACCCACTTATCGAATAGATTCCGGTATTCCTCTACACTTGATTCCTGCTGCTGAATACGTAAGAACCGACCATATAGGGAGCCTTCACGGGATGATCGAAACGGATCAATAATCGTTCTTTTAAGTTTAACCAACAGGTAAATTTGTCTCTCTCCTCCTGCGATCGATACCAGTTGAGTGTGGGGCCTTCAAAACTGATTGTAGCGACCGTGAGTTTTCAGAATTCGTCAGTTTGTGTATTTGAAAATACCTATCTGCACGGAATAGCCATGAATCTGGGTCATCTCCATTGAATACCGACATTTCAACTTTGTTGAATTTGTTTCGATCGTTGTTATCCCCATCGCCATCACCCTTCTTCTCCATCGTGTCATTTTTAGTTTCCTTACTTGCCGAACTCTCTCCCTCCGCCGATTTTCCCGTCCATGTTTCTTGTGCCGACGAATCGATTCGTTTACCGCTCGCTAATACTCGTTCCTTGGCCATCGTCTCCATGAATATCATCACCATCTGGTGTGTTTTCTCCACTTGGGCCTGAAGGTTTTCCATGTTTTGTGACATCACCGTAAGCTTCTCTTCCATCACCGGAATTTTGTTGAGTTCTTGTTCGTGTGTGTCCCTTCTCTCTTCACTTCTGGTTTGAACCATGTTTTCCCACTTATTTCGAATCGACGTGCTCTGATACCAAGTTGATGGGATACCAGTTGTTCTCAATCCCAGTAGCCGAAAATCAAATACTACTGATATTACTAAGATGAAAATAATGATAATAACTACAGGACAATATCACCGAATTGGTTTATAGCCGATTCGATGGACACTCTTCCCTCTCCTGCTATCCTTTCTTTCAAGAATATACAGAAAGATAACTTCACCAAAAGAAAAGCTCCCTGTTCTCTCTTTCACTCCCTTATTTATATTCACTCCCCACCTACAGTGGTCCCCCTGTTTCATGTGTCGCTCCACTCATTGTGGTCCCCACATGCGGTTACATAACTAACTCCTCCTCCTGCTTCTCTTTCCTATTCTTTCTCCTACTGTATTGATGTATGATGGGTGGTCTAACAGATACCTTCCTACTCAAACGTTTTGGAAAATGTTCAGAACTTGTTTCATTGAAGTGTTTCAAATACTCTTCATCGTATTAATTATGTGTTTTTCCTGGGTGTCTATTTAGGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGGCAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGCGATGGTGTGCTACCTAAAGAGGAGACTGTATCCTCTTGTTTTGGTCTATAAAATGAATTTCTAAATAAGCATTGGAAAGGAGGGCTATAGTTGACATTTTATTGTGCTGAATTTTGGTTATTAAAGGGGTGTAAGTGCAATCAAGTTTTCCTTAATCATCAATAGCTCAGGCGTGCAGATCTGGAGAAGAAAGCAGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGTGACAAATAGCCTTTTTATGTTTCATGTGTATTGTGTGTCTATAAAGCTTGGTGGCCTTATTAAAACTTTTTCATGTGGTAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGGTATGTATTATCGCAATTGTTTCTGTGTTATTGAGATGAGTTCAGTGCAATAATGAGTTCAAATGTGCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAATGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGTTTGTGTTGTTATCTGTTAAGAAACTCCTCACTATGCACTATATTTTCTGAGATTTTATTTACATGGAGTTTATAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAATGCATGTTTCAAATGCCATTTTCTCAAGTAACCCTTGCAGGTGAATACTTTGATTGCTGACTTGTAACCTTAATGGTGCTTCTAGTCTTGACTATAATATTATGTTGCATGAGGGGCTTCACTTCTACAGCTTACTTGTGAAATAAATCATTTTTTTTATTTGGAATAATTTAATAGATTTAAAGGCCAGTGTTATTGGTATGGATTTAGTTATCCAGTTTTTTTAACTATTGAATTTAGGGGGGAAAAGGTCATTTATTAACAAGTGAGAACAAAGCTACGATGAGCAAAATAAATGGTCCTCTACAAGGCGTTCTATTTTTTACTTAATTAAGAGGAATTAACCGATTTTAAGATGAGATTATGCTCCCTTTGGTGAATGCGATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTTTTACTCCATAGTGGTGGATAATTGTCATACTTGAATGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGCGATCCTTTTGAGCATGTGAATTTTTTTTCTTTGCCTTTTACATTTCTGTTTTTTTTTTCTAGTTCTCTGTTTATGGATTCTACACCCTTTCGGATATTTATATATGAAGGCCTTAAGTTTTCATGATTCTCTTGCAGCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGGTACTTACCCATATCTCAATCTAGTGTTTTAATCGATCTATTTATACATCCAAAGTTGGATGTTCTTTCTCTCCACACCTGGAGACAGATAATGAATGAGGGTTCCGATGAATGATAAGTGTTCTACTGCGATTGAACTTTCAGATTATTATATCAATCTTTATTTGGTTTATGCAGATAGTGTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCATGCAATCAAGAAGTTGAACTGTCTGCCCTGTAAATTATTACAAAGTTTAGGCCAGATTCAAGCGGGCACACTCCTTTATGCAGCATAACAATTCGTTTAGAACATGAATGAGAAATCCTATAGCATCATTCTTTATCTTGGGAGTTGCACTATTCTTTATCTTGGGAGTTGCACTGGTGCACACCAAGAATTACCACTAGCTAGAATCTAACTCTATGCCGAAGAAGGCTTTTGTGATTTCTGTTTAGGAAAAAGTCGAAACATTGATGCAGAGTTAGGAATCTTTTTAGTTGTACAATTGTAAATCCGAATAACATATATTTTCTTTTAGATTATGTACTTTCTAACCGTGGACGATGGATTGATCAACAACTA

mRNA sequence

GGAAGAAAGTTGGAGAAAAAGTGAAGCAAAGTCTCAACCTAGAAGAATGAGCAGAAAGATAGGAGAATAGGTTGAGCCTCAGCGACTGAAACAGGTACGGCAACTTCCCCAACTGCTGAAACCCGGATACAGGAAGGAGAAGAACGGCTACGTGGACTGAGGCAGCTTCTAATGGCGCCGACTGATGGTTTGTGCGTCTTCTTATTGAAGTGTGAAATATGAGCTACTTGCTGACTCCCACTGGGTGGTAGGCTCTGGCCGGGTACCAAGAATTGAGTGAATATAGTGGGTTGGAAATCTTTGATCAAGTCAAGAGACCTTTCTCATTCCCGCAAGGACACAAGTACTTCTCCAACAAGAACTGAGAGCTACAGGAACAAGAACTAGCGGGACAAGAACTTAGTCAACACGAACAGCTACTGCAAGAGCGGCCTCTTGCCCTTGGACCACTCAAAATCAGGGAGCCACAAGAATTGCAGATTGTCTCACAGAAGAATGGACACATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTGGAAGCTCTTGACGAGATTGTTTCCTTTGTCTCTCGTTCCCATGGCTTCGAAGATGAAGCTATAGAATTTGTTCTTGACAATCTCCATGAAGAATCTTGTACTGTTCCTTCTTCTTTCATACTACGATTATATCTTCTTTGCAATTCACCTCATTCCTTTTCATGGACAGTTTCTTTGTTTTGGCTATTGTGGCAGTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGAGTTATCAGCATTATGGTTGCAGCTGATAAAGTGGGAGAAGAAAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTGATATCCCCAAGTTTCGTTATGATCCCATAAAAAAGATCTTTCTGCACACAGAAAACCTTCCAATTCATGGAGATGCTTCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCTCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGATGGCCACTTCTACTTGGAAGACCTTACCGCATCTGTGGAAATTAATTTATCTAGTGCTAAGATAACTACAGGTCTATTTACAGAGAACACCATTATTGTAGCTGAAGGAGAGATGCTCGTGGAGGGTATTTTTCAGGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGGCAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGCGATGGTGTGCTACCTAAAGAGGAGACTCTCAGGCGTGCAGATCTGGAGAAGAAAGCAGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAATGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAATGCATGTTTCAAATGCCATTTTCTCAAGTAACCCTTGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGCGATCCTTTTGAGCATCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGATAGTGTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCATGCAATCAAGAAGTTGAACTGTCTGCCCTGTAAATTATTACAAAGTTTAGGCCAGATTCAAGCGGGCACACTCCTTTATGCAGCATAACAATTCGTTTAGAACATGAATGAGAAATCCTATAGCATCATTCTTTATCTTGGGAGTTGCACTATTCTTTATCTTGGGAGTTGCACTGGTGCACACCAAGAATTACCACTAGCTAGAATCTAACTCTATGCCGAAGAAGGCTTTTGTGATTTCTGTTTAGGAAAAAGTCGAAACATTGATGCAGAGTTAGGAATCTTTTTAGTTGTACAATTGTAAATCCGAATAACATATATTTTCTTTTAGATTATGTACTTTCTAACCGTGGACGATGGATTGATCAACAACTA

Coding sequence (CDS)

ATGGACAGTTTCTTTGTTTTGGCTATTGTGGCAGTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGAGTTATCAGCATTATGGTTGCAGCTGATAAAGTGGGAGAAGAAAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTGATATCCCCAAGTTTCGTTATGATCCCATAAAAAAGATCTTTCTGCACACAGAAAACCTTCCAATTCATGGAGATGCTTCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCTCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGATGGCCACTTCTACTTGGAAGACCTTACCGCATCTGTGGAAATTAATTTATCTAGTGCTAAGATAACTACAGGTCTATTTACAGAGAACACCATTATTGTAGCTGAAGGAGAGATGCTCGTGGAGGGTATTTTTCAGGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGGCAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGCGATGGTGTGCTACCTAAAGAGGAGACTCTCAGGCGTGCAGATCTGGAGAAGAAAGCAGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAATGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAATGCATGTTTCAAATGCCATTTTCTCAAGTAACCCTTGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGCGATCCTTTTGAGCATCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGATAGTGTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCATGCAATCAAGAAGTTGAACTGTCTGCCCTGTAA

Protein sequence

MDSFFVLAIVAVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFLHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL*

Homology

[Close]

BLAST of Cucsa.054690 vs. Swiss-Prot
Match: DPB2_ARATH (DNA polymerase epsilon subunit B OS=Arabidopsis thaliana GN=DPB2 PE=1 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 4.1e-198
Identity = 340/472 (72.03%), Postives = 395/472 (83.69%), Query Frame = 1


Query: 13  KSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL-H 72
           KS  +D ++V  +I+ ++ A    EE     TS S+L II+AF +PKF YD +KK F  H
Sbjct: 58  KSSTVDAESVRGLINRLLGAHNAPEEPT---TSASSLAIIDAFLVPKFGYDSVKKKFNEH 117

Query: 73  TENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQ 132
           T +LPIHG+ASAK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q
Sbjct: 118 TSSLPIHGEASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQ 177

Query: 133 TGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQ 192
            GRKWVMGVISQ+EDGHFYLEDL+ASVEI+LS AKITTG FTENTII+AEGEM V GIFQ
Sbjct: 178 RGRKWVMGVISQLEDGHFYLEDLSASVEIDLSKAKITTGFFTENTIILAEGEMQVNGIFQ 237

Query: 193 VVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDS 252
           V+TCGFPPLE+R K+LK  +  DFFG G L KEE ++ ADLE++AVND FVILSDIWLD 
Sbjct: 238 VITCGFPPLEDRDKTLKAHSEYDFFGGGTLTKEEMIKLADLERQAVNDTFVILSDIWLDD 297

Query: 253 EEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHP 312
           EE M KLET+LDGFE+VE VPSLFV MGNFCS PCN++F S+SSLR QFGKLG+MI  HP
Sbjct: 298 EEVMRKLETVLDGFESVETVPSLFVFMGNFCSRPCNLSFGSYSSLREQFGKLGRMIGNHP 357

Query: 313 RLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIV 372
           RL E+S+FLFIPGP+DAGPSTVLPRCALPKYLTEEL+  + NAIFSSNPCRV+FY QEIV
Sbjct: 358 RLKENSRFLFIPGPEDAGPSTVLPRCALPKYLTEELRNIIPNAIFSSNPCRVKFYNQEIV 417

Query: 373 FFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHL 432
           FFRQDLLYRMRRSCL+ PS+EET+DPF+HLV TITHQSHLCPLPL++QPIIWNYDH L L
Sbjct: 418 FFRQDLLYRMRRSCLVTPSSEETNDPFKHLVYTITHQSHLCPLPLMVQPIIWNYDHALRL 477

Query: 433 YPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           YPTPH IVLGD+S+Q+  K+ G TCFNPGSF+ DSTFVAYRP  QEVELSAL
Sbjct: 478 YPTPHTIVLGDKSEQEVCKFGGTTCFNPGSFSTDSTFVAYRPSTQEVELSAL 526

[Close]

BLAST of Cucsa.054690 vs. Swiss-Prot
Match: DPOE2_DICDI (DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum GN=pole2 PE=3 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.2e-80
Identity = 163/436 (37.39%), Postives = 260/436 (59.63%), Query Frame = 1


Query: 48  ALCIINAFDIPKFRYDPIKKIFLHTENLP--IHGDASAKAALYRDRFLLLSQRLSRDQHF 107
           AL +I+AF+ P F +D   K F+ +EN    +HG +++K+ LYR R+L + QR  R+ +F
Sbjct: 79  ALKVIDAFNTPLFNFDSNSKQFIKSENFDRSLHGSSNSKSDLYRKRYLKVLQRTERNDYF 138

Query: 108 SKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSA 167
           S P             I+P+ SL+G TGRK V+G ISQ+E+  FY+EDL  +V+I++S A
Sbjct: 139 STPVLASDKLKNEYQTITPLSSLLGNTGRKHVLGTISQIEEDQFYIEDLNTNVKIDISKA 198

Query: 168 KITTGLFTENTIIVAEGEMLVEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEE 227
           K   G+ T N+II A GE  ++G+F       PP EER ++LK L   D FG+   P+++
Sbjct: 199 KFEFGIVTINSIIQASGE-FIDGVFIADKIQLPPTEERCETLKFLQNIDMFGE--RPQKK 258

Query: 228 TLRR-ADLEKKAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSH 287
           T+ +    EK+  ++  + LSD+WLDSE  M +L+ +  G++  +  P   +LMGNF  H
Sbjct: 259 TMEQLIKYEKEKEDNSILFLSDVWLDSERVMERLDYLFGGYK--DCPPFAMILMGNFTEH 318

Query: 288 PCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEHSKFLFIPGPDDAGPS--TVLPRCALPKY 347
           P  +   +   L+  F +L  +I  +P +++ ++F+F+PGP D   S   +LP+  +   
Sbjct: 319 P--LINGTQYQLKKYFNQLAMVIQKYPNIHQFTQFIFVPGPTDPTGSLLNILPKFPISNV 378

Query: 348 LTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLV 407
             ++    +  + F++NPCR+R+ +QEI+ FR DL  +MRR C++ PS  ++ D  +HL+
Sbjct: 379 FIKDFISLIPKSTFTTNPCRIRYCSQEIIIFRDDLTNKMRRHCILEPS--QSCDISQHLI 438

Query: 408 ATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQ-QAFKYTGITCFNPGS 467
             I   SHLC L L  +PI WNYDH + +YP P ++V+GD+S Q +  +  G    NP S
Sbjct: 439 ELICSNSHLCNLTLEDKPIYWNYDHAMSVYPLPDLLVIGDKSNQYEHSRADGTYSMNPSS 498

Query: 468 FTNDSTFVAYRPCNQE 478
           F+ D +F  Y P N++
Sbjct: 499 FSTDYSFAHYIPANKQ 505

[Close]

BLAST of Cucsa.054690 vs. Swiss-Prot
Match: DPOE2_CHICK (DNA polymerase epsilon subunit 2 OS=Gallus gallus GN=POLE2 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 9.7e-75
Identity = 165/447 (36.91%), Postives = 255/447 (57.05%), Query Frame = 1


Query: 51  IINAFDIPKFRYDPIKKIF--LHTENLPI---HGDASAKAALYRDRFLLLSQRLSRDQHF 110
           II AFDIP++ Y+P +K F  L   NLP+    G A  KA L+R+R+ +L QR  R + F
Sbjct: 88  IIGAFDIPRYIYNPDRKRFVPLSMTNLPVPNLFGTARDKAELFRERYSILQQRTHRHELF 147

Query: 111 SKPAF----DIGMSHFGSCEISPIQSLVGQTGRKW---VMGVISQMEDGHFYLEDLTASV 170
           +  A     D   S F   ++  +++L+G T +     V+G+I+Q+++G ++LED T  V
Sbjct: 148 TPAAVVIHPDDNRSKF---QLKTVETLLGNTAKVREVIVLGMITQLKEGKYFLEDPTGVV 207

Query: 171 EINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGD 230
           +++LS A+  +GL+TE+  ++AEG    + +F V   GFPP E    +       +FFG 
Sbjct: 208 QLDLSKAQFHSGLYTESCFVLAEG-WYEDEVFHVNAFGFPPTEPSATTRAFYGNINFFGG 267

Query: 231 -GVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVL 290
                 + + +   LE +  + MFV LSD+WLD  E + KL T+  G+ +    P+ F  
Sbjct: 268 PSSASVKASAKLKQLEDENEDAMFVFLSDVWLDQAEVLEKLHTMFSGYSSAP--PTCFFF 327

Query: 291 MGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRC 350
            GNF S P     N   SL+     L  +I  +P +++ S+F+F+PGP+D GP +VLPR 
Sbjct: 328 CGNFSSAP--YGKNQIQSLKGSLKALADIICEYPSIHKSSRFVFVPGPEDPGPGSVLPRP 387

Query: 351 ALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDP 410
            L + +T+E +  V  ++F++NPCRV++ TQEI+ FR+DL+ +M R+C+  PS+  + D 
Sbjct: 388 PLAENITQEFRQLVPFSVFTTNPCRVQYCTQEIIIFREDLVNKMCRNCVRFPSS--SMDI 447

Query: 411 FEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCF 470
             H V TI  Q HL PLPL + P+ W YD+ L +YP P ++V+ D+        T   C 
Sbjct: 448 PNHFVKTILSQGHLTPLPLYVSPVYWAYDYALRVYPVPDMLVIADKYDPFTVTNTDCLCI 507

Query: 471 NPGSFTNDS-TFVAYRPCNQEVELSAL 484
           NPGSF     +F  + P N+ VE S L
Sbjct: 508 NPGSFPRSGFSFKVFYPSNKTVEDSKL 524

[Close]

BLAST of Cucsa.054690 vs. Swiss-Prot
Match: DPOE2_BOVIN (DNA polymerase epsilon subunit 2 OS=Bos taurus GN=POLE2 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.6e-72
Identity = 167/486 (34.36%), Postives = 264/486 (54.32%), Query Frame = 1


Query: 9   IVAVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKI 68
           I AV+   L  + + R + +  A  +  +    TI       II AFDIP+F Y+  +K 
Sbjct: 49  IDAVEKQPLSSNMIERSV-VEAAVQECSQSVDETIDHI--FNIIGAFDIPRFVYNSERKK 108

Query: 69  FLHT--ENLP---IHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEI 128
           FL     N P   + G A  KA L+R+R+ +L QR  R + F+ P         GS  ++
Sbjct: 109 FLPLLMTNHPAPNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQL 168

Query: 129 SPIQSLVGQT---GRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIV 188
             I++L+G T   G   V+G+I+Q+++G F+LED T +++++LS A+  +GL+TE+  ++
Sbjct: 169 KTIETLLGSTSKIGDVIVLGMITQLKEGKFFLEDPTGTIQLDLSKAQFHSGLYTESCFVL 228

Query: 189 AEGEMLVEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRA-DLEKKAVN 248
           AEG    + +F V   GFPP E    +       +FFG       +T  +   LE +  +
Sbjct: 229 AEG-WFEDQVFHVNAFGFPPTEPSSTTRAYYGNTNFFGGPSNTSVKTSAKLKQLEDENKD 288

Query: 249 DMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRL 308
            MFV +SD+WLD  E + KL  +  G+      P+ F+L GNF S P     N   +L+ 
Sbjct: 289 AMFVFISDVWLDQVEVLEKLHIMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKD 348

Query: 309 QFGKLGKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSS 368
               L  +I  +P +++ S+F+F+PGP+D G  ++LPR    + +T E +  V  ++F++
Sbjct: 349 SLKTLADIICGYPNIHQSSRFVFVPGPEDPGFGSILPRPPFAESITNEFRQRVPFSVFTT 408

Query: 369 NPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVI 428
           NPCR+++ TQEI+ FR+DL+ +M R+C+  PS+    D   H V T+  Q HL PLPL +
Sbjct: 409 NPCRIQYCTQEIIVFREDLVNKMCRNCVRFPSS--NLDIPNHFVKTVLSQGHLTPLPLYV 468

Query: 429 QPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDS-TFVAYRPCNQE 484
            P+ W YD+ L +YP P ++V+ D+        T   C NPGSF     +F  + P N+ 
Sbjct: 469 CPVYWAYDYALRVYPVPDLLVIADKYDPFTLTNTECLCINPGSFPRSGFSFKVFYPSNKV 524

[Close]

BLAST of Cucsa.054690 vs. Swiss-Prot
Match: DPOE2_MOUSE (DNA polymerase epsilon subunit 2 OS=Mus musculus GN=Pole2 PE=2 SV=2)

HSP 1 Score: 270.8 bits (691), Expect = 2.9e-71
Identity = 165/486 (33.95%), Postives = 262/486 (53.91%), Query Frame = 1


Query: 9   IVAVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKI 68
           I AV+   L  + + R + +  A  +  +    TI       II AFDIP+F Y+  +K 
Sbjct: 49  IDAVEKQPLSSNMIERSV-VEAAVQECSQSMDETIEHV--FNIIGAFDIPRFIYNSERKK 108

Query: 69  FLHTENL-----PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEI 128
           FL           + G A  KA LY +R+ +L QR  R + F+ P     +   GS  ++
Sbjct: 109 FLPLSMTNHAAPTLFGTARDKAELYLERYTILHQRTHRHELFTPPVIGSHLEESGSKFQL 168

Query: 129 SPIQSLVGQT---GRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIV 188
             I++L+G T   G   V+G+I+Q+++G F+LED T +V+++LS A+  +GL+TE   ++
Sbjct: 169 KTIETLLGSTSKVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVL 228

Query: 189 AEGEMLVEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRA-DLEKKAVN 248
           AEG    + +F     GFPP E    +       +FFG       +T  +   LE +  +
Sbjct: 229 AEG-WFEDQVFHANAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKTYTKLRQLEDENKD 288

Query: 249 DMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRL 308
            MFVI+SD+WLD  + + K   +  G+      P+ F+L GNF S P     N   +L+ 
Sbjct: 289 AMFVIVSDVWLDQVQVLEKFHVMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKD 348

Query: 309 QFGKLGKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSS 368
               L  +I  +P +++ S+F+F+PGP+D G  ++LPR  L + +T+E +  V  ++F++
Sbjct: 349 SLKSLADIICEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQRVPFSVFTT 408

Query: 369 NPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVI 428
           NPCR+++ TQEI+ FR+DL+ +M R+C+  PS+  + D   H V TI  Q HL PLPL +
Sbjct: 409 NPCRIQYCTQEIIIFREDLVNKMCRNCVRFPSS--SLDIPTHFVKTILSQGHLAPLPLYV 468

Query: 429 QPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDS-TFVAYRPCNQE 484
            P+ W YD+ L +YP P ++V+ D+        T   C NPGSF      F  + P ++ 
Sbjct: 469 CPVHWAYDYTLRVYPVPDLLVIADKYDPFTVTNTDCLCINPGSFPRSGFAFKVFYPSSKT 524

[Close]

BLAST of Cucsa.054690 vs. TrEMBL
Match: A0A067DVL2_CITSI (DNA polymerase epsilon subunit 2 OS=Citrus sinensis GN=CISIN_1g009713mg PE=3 SV=1)

HSP 1 Score: 780.0 bits (2013), Expect = 1.7e-222
Identity = 374/474 (78.90%), Postives = 425/474 (89.66%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL 70
           ++KS I+DK++V+RV S+++ A+   E    + ++ SA+ +I+AF +PKFRYD IKK F 
Sbjct: 55  SLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFY 114

Query: 71  -HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV 130
            H  +LPIHG+ASAKAALYRDRFLLL QR+SRDQHFS+P+FD+  S FGSCEIS IQSLV
Sbjct: 115 QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLV 174

Query: 131 GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGI 190
           GQTGR+WVMGVISQ+EDGHFYLEDL ASVEI+LS AKITTG FTENTI+VAEGEMLV+GI
Sbjct: 175 GQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234

Query: 191 FQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWL 250
           FQV+TCGFPPLE+R +SLKLLAG DFFG G L KE+TLR ADLEK+A NDMFVILSDIWL
Sbjct: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWL 294

Query: 251 DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA 310
           D+EE MGKLE +LDGFE+VEVVPSLFV MGNFCSHPCN++F+SFSSLRLQFGKLG+MIAA
Sbjct: 295 DNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAA 354

Query: 311 HPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQE 370
           HPRL EHS+FLFIPGPDDAGPSTVLPRCALPKYLTEELQ ++ NAIFSSNPCR++FYTQE
Sbjct: 355 HPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRIKFYTQE 414

Query: 371 IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL 430
           IVFFRQDLLYRMRRSCLIPPS EET DPFEHLVATITHQSHLCPLPL +QPIIWNYDH L
Sbjct: 415 IVFFRQDLLYRMRRSCLIPPSREETDDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHSL 474

Query: 431 HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           HLYPTPH IVL D+S+Q+AFKYTGITCFNPGSF++DSTFVAYRPC QEVE SAL
Sbjct: 475 HLYPTPHAIVLADKSEQKAFKYTGITCFNPGSFSSDSTFVAYRPCTQEVEFSAL 528

[Close]

BLAST of Cucsa.054690 vs. TrEMBL
Match: A0A059AW13_EUCGR (DNA polymerase epsilon subunit 2 OS=Eucalyptus grandis GN=EUGRSUZ_H00594 PE=3 SV=1)

HSP 1 Score: 776.5 bits (2004), Expect = 1.8e-221
Identity = 369/476 (77.52%), Postives = 426/476 (89.50%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMVAADKVGEESPNTITST--SALCIINAFDIPKFRYDPIKKI 70
           ++KS I+DKD V+RV+S+++ A+   EESP+       SAL +I+AF +PKFRYDP+KKI
Sbjct: 54  SLKSSIIDKDPVNRVVSLLLEAEAAVEESPDAACEGRGSALRVIDAFLVPKFRYDPVKKI 113

Query: 71  FL-HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQS 130
           F  HT +LPIHG+ASAKA LY+DRFLLL QRLSRDQHF+KPAF+   + FGSCEISPIQS
Sbjct: 114 FYEHTGSLPIHGEASAKAKLYKDRFLLLYQRLSRDQHFAKPAFETETTEFGSCEISPIQS 173

Query: 131 LVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVE 190
           LVGQTGR+WVMGVISQ+EDGHFYLEDLTASVEINLS AK+TTG FTENTI+V EG+ML+E
Sbjct: 174 LVGQTGRRWVMGVISQLEDGHFYLEDLTASVEINLSDAKVTTGFFTENTIVVVEGQMLLE 233

Query: 191 GIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDI 250
           GIF++ TCGFPPLEER KSLK LAG DFFG G L KEETLR A+LEK+AVNDMF+ILSD+
Sbjct: 234 GIFKIFTCGFPPLEERDKSLKALAGLDFFGGGALTKEETLRLAELEKRAVNDMFIILSDV 293

Query: 251 WLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMI 310
           WLD+EEAMGKLE +LDGFEN EVVPSLFVLMGNFCS PCN++F+S+SS+R QFGKLG+MI
Sbjct: 294 WLDNEEAMGKLEMVLDGFENEEVVPSLFVLMGNFCSRPCNLSFHSYSSIRAQFGKLGQMI 353

Query: 311 AAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYT 370
            +HPRL EHS+FLFIPGP+DAGPSTVLPRCALP+Y+TEE Q  + NAIFSSNPCR++FYT
Sbjct: 354 ESHPRLKEHSRFLFIPGPEDAGPSTVLPRCALPRYITEEFQNRIPNAIFSSNPCRIKFYT 413

Query: 371 QEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDH 430
           QEIVFFRQDLLY+MRRSCL+PPSTEETSDPFEHLVATITHQSHLCPLPLV+QP+IWNYDH
Sbjct: 414 QEIVFFRQDLLYKMRRSCLMPPSTEETSDPFEHLVATITHQSHLCPLPLVVQPVIWNYDH 473

Query: 431 CLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
            LHLYPTPH IVLGD+S+Q+AF YTGITCFNPGSF+ND TFVAYRPC +EVELSAL
Sbjct: 474 SLHLYPTPHTIVLGDKSEQKAFSYTGITCFNPGSFSNDGTFVAYRPCTREVELSAL 529

[Close]

BLAST of Cucsa.054690 vs. TrEMBL
Match: V4T327_9ROSI (DNA polymerase epsilon subunit 2 OS=Citrus clementina GN=CICLE_v10019690mg PE=3 SV=1)

HSP 1 Score: 775.4 bits (2001), Expect = 4.1e-221
Identity = 372/474 (78.48%), Postives = 424/474 (89.45%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL 70
           ++KS I+DK++V+RV S+++ A+   E    + ++ SA+ +I+AF +PKFRYD IKK F 
Sbjct: 55  SLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFY 114

Query: 71  -HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV 130
            H  +LPIHG+ASAKAALYRDRFLLL QR+SRDQHFS+P+FD+  S FGSCEIS IQSLV
Sbjct: 115 QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLV 174

Query: 131 GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGI 190
           GQTGR+WVMGVISQ+EDGHFYLEDL ASVEI+LS AKITTG FTENTI+VAEGEMLV+GI
Sbjct: 175 GQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234

Query: 191 FQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWL 250
           FQV+TCGFPPLE+R +SLKLLA  DFFG G L KE+TLR ADLEK+A NDMFVILSDIWL
Sbjct: 235 FQVITCGFPPLEDRDQSLKLLAEYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWL 294

Query: 251 DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA 310
           D+EE MGKLE +LDGFE+VEVVPSLFV MGNFCSHPCN++F+SFSSLRLQFGKLG+MIAA
Sbjct: 295 DNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAA 354

Query: 311 HPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQE 370
           HPRL EHS+FLFIPGPDDAGPSTVLPRCALPKYLTEEL+ ++ NAIFSSNPCR++FYTQE
Sbjct: 355 HPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELKKYIPNAIFSSNPCRIKFYTQE 414

Query: 371 IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL 430
           IVFFRQDLLYRMRRSCLIPPS EET DPFEHLVATITHQSHLCPLPL +QPIIWNYDH L
Sbjct: 415 IVFFRQDLLYRMRRSCLIPPSREETDDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHSL 474

Query: 431 HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           HLYPTPH IVL D+S+Q+AFKYTGITCFNPGSF++DSTFVAYRPC QEVE SAL
Sbjct: 475 HLYPTPHAIVLADKSEQKAFKYTGITCFNPGSFSSDSTFVAYRPCTQEVEFSAL 528

[Close]

BLAST of Cucsa.054690 vs. TrEMBL
Match: A0A067K917_JATCU (DNA polymerase epsilon subunit 2 OS=Jatropha curcas GN=JCGZ_13167 PE=3 SV=1)

HSP 1 Score: 775.0 bits (2000), Expect = 5.3e-221
Identity = 374/476 (78.57%), Postives = 425/476 (89.29%), Query Frame = 1


Query: 10  VAVKSPILDKDAVHRVISIMVAADKVGEESPN-TITSTSALCIINAFDIPKFRYDPIKKI 69
           V VKS I+DK+ +HR++S ++ AD   E+ P+  ++S SA+ +I+AF IPKF +DPIKK 
Sbjct: 58  VGVKSSIIDKEPIHRLVSGLLEADDAVEQGPSDNVSSHSAIRVIDAFLIPKFHFDPIKKQ 117

Query: 70  FL-HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQS 129
           F  HT  L IHG++SAKAALY+DR+LLL QR+SRDQHFSKPAFD GMS +GSCEI+PIQS
Sbjct: 118 FYQHTGGLSIHGESSAKAALYKDRYLLLFQRISRDQHFSKPAFDTGMSQYGSCEIAPIQS 177

Query: 130 LVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVE 189
           LVGQTG++WVMGVISQ+EDGHFYLEDLTASVEINL+ AKITTG  +ENTI+VAEGEML++
Sbjct: 178 LVGQTGKRWVMGVISQLEDGHFYLEDLTASVEINLTKAKITTGFLSENTIVVAEGEMLLD 237

Query: 190 GIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDI 249
           GIFQV TCGFPPLEER KS+KLL   DFFG G L KEETLR A+LEK AVNDMFVILSDI
Sbjct: 238 GIFQVYTCGFPPLEERDKSMKLLEQHDFFGGGSLTKEETLRLAELEKGAVNDMFVILSDI 297

Query: 250 WLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMI 309
           WLD+EEAMGKLET+LDGFE  EVVPSLFV MGNFCSHPCN++F+SFSSLRLQF  LGK+I
Sbjct: 298 WLDNEEAMGKLETVLDGFEVQEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFENLGKLI 357

Query: 310 AAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYT 369
           AAHPRL EHS+FLFIPGPDDAGPSTVLPRC+LPKYLTE LQ H+ NAIFSSNPCRV+FYT
Sbjct: 358 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCSLPKYLTEGLQKHIPNAIFSSNPCRVKFYT 417

Query: 370 QEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDH 429
           QEIVFFR DLLYRMRRSCL+PPSTEET+DPFEHLVATITHQSHLCPLPLV+QPIIWNYDH
Sbjct: 418 QEIVFFRYDLLYRMRRSCLMPPSTEETADPFEHLVATITHQSHLCPLPLVVQPIIWNYDH 477

Query: 430 CLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
            LHLYP+PH IVLGD+S+Q+AFKYTGITCFNPGSF+ND+TFVAYRPC QEVE SAL
Sbjct: 478 SLHLYPSPHTIVLGDKSEQKAFKYTGITCFNPGSFSNDNTFVAYRPCTQEVEFSAL 533

[Close]

BLAST of Cucsa.054690 vs. TrEMBL
Match: A0A061FWB8_THECC (DNA polymerase epsilon subunit B2 isoform 1 OS=Theobroma cacao GN=TCM_013360 PE=4 SV=1)

HSP 1 Score: 767.7 bits (1981), Expect = 8.5e-219
Identity = 370/471 (78.56%), Postives = 418/471 (88.75%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTS--ALCIINAFDIPKFRYDPIKK- 70
           ++KS I+DK AVHRVIS+++ A+   EE P + TS S  ++ +++AF +PKFRYDPIKK 
Sbjct: 54  SLKSSIIDKGAVHRVISLLLEAEAAEEECPTSSTSLSHSSIRVVDAFLVPKFRYDPIKKH 113

Query: 71  IFLHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQS 130
            F H  +LPIHGDASAK ALYRDRFLLL QR+SRDQHF KPAFD   +   SC++SPIQS
Sbjct: 114 FFQHAGSLPIHGDASAKPALYRDRFLLLFQRVSRDQHFIKPAFDTDETS-QSCQLSPIQS 173

Query: 131 LVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVE 190
           LVGQ G++WVMGVISQ+EDGHFYLEDLTA+VEI+ S AKITTG F ENT+IVAEGEML E
Sbjct: 174 LVGQRGKRWVMGVISQLEDGHFYLEDLTAAVEIDFSKAKITTGFFMENTVIVAEGEMLSE 233

Query: 191 GIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDI 250
           GIFQV+TCGFPPLE+R KS K+LAG DFFG G L KEETLR ADLEK+AVNDMFVILSDI
Sbjct: 234 GIFQVITCGFPPLEDRDKSFKILAGHDFFGGGTLTKEETLRLADLEKRAVNDMFVILSDI 293

Query: 251 WLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMI 310
           WLD+EE M KLET+L+GFE+VE+VPSLFVLMGNFCSHPCN++F+SFSSLRLQFGKLG+MI
Sbjct: 294 WLDNEEVMEKLETVLNGFESVEIVPSLFVLMGNFCSHPCNLSFHSFSSLRLQFGKLGRMI 353

Query: 311 AAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYT 370
            AHPRL E S+FLFIPGPDDAGPST LPRCALPKYLTEELQ HV NAIFS+NPCR++FYT
Sbjct: 354 EAHPRLKEQSRFLFIPGPDDAGPSTALPRCALPKYLTEELQKHVPNAIFSTNPCRIKFYT 413

Query: 371 QEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDH 430
           QEIVFFRQDLLYRMRRSCLIPPSTEET DPFEHLVATITHQSHLCPLPL +QPIIWNYDH
Sbjct: 414 QEIVFFRQDLLYRMRRSCLIPPSTEETDDPFEHLVATITHQSHLCPLPLFVQPIIWNYDH 473

Query: 431 CLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEV 479
           CLHLYPTPH I+LGDRS+Q+AFKYTGITCFNPGSF++DSTFVAYRPC QEV
Sbjct: 474 CLHLYPTPHTIILGDRSEQKAFKYTGITCFNPGSFSDDSTFVAYRPCTQEV 523

[Close]

BLAST of Cucsa.054690 vs. TAIR10
Match: AT5G22110.1 (AT5G22110.1 DNA polymerase epsilon subunit B2)

HSP 1 Score: 692.2 bits (1785), Expect = 2.3e-199
Identity = 340/472 (72.03%), Postives = 395/472 (83.69%), Query Frame = 1


Query: 13  KSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL-H 72
           KS  +D ++V  +I+ ++ A    EE     TS S+L II+AF +PKF YD +KK F  H
Sbjct: 58  KSSTVDAESVRGLINRLLGAHNAPEEPT---TSASSLAIIDAFLVPKFGYDSVKKKFNEH 117

Query: 73  TENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQ 132
           T +LPIHG+ASAK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q
Sbjct: 118 TSSLPIHGEASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQ 177

Query: 133 TGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQ 192
            GRKWVMGVISQ+EDGHFYLEDL+ASVEI+LS AKITTG FTENTII+AEGEM V GIFQ
Sbjct: 178 RGRKWVMGVISQLEDGHFYLEDLSASVEIDLSKAKITTGFFTENTIILAEGEMQVNGIFQ 237

Query: 193 VVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDS 252
           V+TCGFPPLE+R K+LK  +  DFFG G L KEE ++ ADLE++AVND FVILSDIWLD 
Sbjct: 238 VITCGFPPLEDRDKTLKAHSEYDFFGGGTLTKEEMIKLADLERQAVNDTFVILSDIWLDD 297

Query: 253 EEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHP 312
           EE M KLET+LDGFE+VE VPSLFV MGNFCS PCN++F S+SSLR QFGKLG+MI  HP
Sbjct: 298 EEVMRKLETVLDGFESVETVPSLFVFMGNFCSRPCNLSFGSYSSLREQFGKLGRMIGNHP 357

Query: 313 RLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIV 372
           RL E+S+FLFIPGP+DAGPSTVLPRCALPKYLTEEL+  + NAIFSSNPCRV+FY QEIV
Sbjct: 358 RLKENSRFLFIPGPEDAGPSTVLPRCALPKYLTEELRNIIPNAIFSSNPCRVKFYNQEIV 417

Query: 373 FFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHL 432
           FFRQDLLYRMRRSCL+ PS+EET+DPF+HLV TITHQSHLCPLPL++QPIIWNYDH L L
Sbjct: 418 FFRQDLLYRMRRSCLVTPSSEETNDPFKHLVYTITHQSHLCPLPLMVQPIIWNYDHALRL 477

Query: 433 YPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           YPTPH IVLGD+S+Q+  K+ G TCFNPGSF+ DSTFVAYRP  QEVELSAL
Sbjct: 478 YPTPHTIVLGDKSEQEVCKFGGTTCFNPGSFSTDSTFVAYRPSTQEVELSAL 526

[Close]

BLAST of Cucsa.054690 vs. NCBI nr
Match: gi|778660923|ref|XP_011657177.1| (PREDICTED: DNA polymerase epsilon subunit 2 [Cucumis sativus])

HSP 1 Score: 956.4 bits (2471), Expect = 1.8e-275
Identity = 471/473 (99.58%), Postives = 473/473 (100.00%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL 70
           ++KSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL
Sbjct: 56  SLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL 115

Query: 71  HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVG 130
           HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVG
Sbjct: 116 HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVG 175

Query: 131 QTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIF 190
           QTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIF
Sbjct: 176 QTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIF 235

Query: 191 QVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 250
           QVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD
Sbjct: 236 QVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLD 295

Query: 251 SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 310
           SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH
Sbjct: 296 SEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAH 355

Query: 311 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 370
           PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI
Sbjct: 356 PRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEI 415

Query: 371 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 430
           VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH
Sbjct: 416 VFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLH 475

Query: 431 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Sbjct: 476 LYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 528

[Close]

BLAST of Cucsa.054690 vs. NCBI nr
Match: gi|659066275|ref|XP_008463560.1| (PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo])

HSP 1 Score: 900.6 bits (2326), Expect = 1.2e-258
Identity = 445/474 (93.88%), Postives = 458/474 (96.62%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIF- 70
           ++KSPIL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AFDI KFRYDPIKKIF 
Sbjct: 56  SLKSPILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFH 115

Query: 71  LHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV 130
            HT +LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV
Sbjct: 116 RHTGDLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV 175

Query: 131 GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGI 190
           GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLS+AKITTGLFTENTIIVAEGEMLVEGI
Sbjct: 176 GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSNAKITTGLFTENTIIVAEGEMLVEGI 235

Query: 191 FQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWL 250
           FQVVTCGFPPLEER KSLKLLAGQDFFG GVLPKEETLR ADLEKKAVNDMFVILSDIWL
Sbjct: 236 FQVVTCGFPPLEERDKSLKLLAGQDFFGGGVLPKEETLRLADLEKKAVNDMFVILSDIWL 295

Query: 251 DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA 310
           DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA
Sbjct: 296 DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA 355

Query: 311 HPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQE 370
           HPRLN+HSKF FIPGPDDAGPSTVLPRCALPKYLTEELQ+HV NA FSSNPCRVRFYTQE
Sbjct: 356 HPRLNKHSKFXFIPGPDDAGPSTVLPRCALPKYLTEELQVHVPNATFSSNPCRVRFYTQE 415

Query: 371 IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL 430
           IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL
Sbjct: 416 IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL 475

Query: 431 HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Sbjct: 476 HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529

[Close]

BLAST of Cucsa.054690 vs. NCBI nr
Match: gi|1009133442|ref|XP_015883902.1| (PREDICTED: DNA polymerase epsilon subunit 2 [Ziziphus jujuba])

HSP 1 Score: 786.9 bits (2031), Expect = 1.9e-224
Identity = 384/478 (80.33%), Postives = 430/478 (89.96%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMV----AADKVGEESPNTITSTSALCIINAFDIPKFRYDPIK 70
           ++KS I+DK+AV+ VIS+++    A D    ++P T T+TSA+ +I+AF +PKFRYD IK
Sbjct: 55  SLKSTIIDKEAVNGVISLLLEAEAAVDDETSDNPAT-TATSAIRVIDAFLVPKFRYDSIK 114

Query: 71  KIFL-HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPI 130
           K+F  HT +LPIHGDASAKAALYRDRF LL QRLSRDQHFSKPAF   +SHFGSCEISPI
Sbjct: 115 KLFYEHTGSLPIHGDASAKAALYRDRFFLLFQRLSRDQHFSKPAFSSELSHFGSCEISPI 174

Query: 131 QSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEML 190
           QSLVGQTGR+WVMGVISQ+EDGHFYLEDLTASVEINL++ KITTG  +ENTI+VAEGEML
Sbjct: 175 QSLVGQTGRRWVMGVISQLEDGHFYLEDLTASVEINLANTKITTGFLSENTIVVAEGEML 234

Query: 191 VEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILS 250
           VEGIFQV+TCGFPPLE+R KSLK+LAG DFFG G+L KEETLR ADLEKKAVNDMFVI+S
Sbjct: 235 VEGIFQVITCGFPPLEDREKSLKVLAGHDFFGGGILTKEETLRLADLEKKAVNDMFVIIS 294

Query: 251 DIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGK 310
           D+WLD+EEAMGKL T+LD FEN EVVPSLFV MGNFCSHPCN++F+SFSSLR QFGKLG+
Sbjct: 295 DVWLDNEEAMGKLGTVLDVFENEEVVPSLFVFMGNFCSHPCNLSFHSFSSLRSQFGKLGQ 354

Query: 311 MIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRF 370
           MI  HPRL EHS+FLFIPGPDDAGPSTVLPRC LPKYLTEELQ H+ NAIFSSNPCRV+F
Sbjct: 355 MIGNHPRLKEHSRFLFIPGPDDAGPSTVLPRCTLPKYLTEELQNHIPNAIFSSNPCRVKF 414

Query: 371 YTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNY 430
           YTQEIVFFRQDLLYRMRRSCL+PPSTEET D FEHLVATITHQSHLCPLPL +QPIIWNY
Sbjct: 415 YTQEIVFFRQDLLYRMRRSCLVPPSTEETDDHFEHLVATITHQSHLCPLPLSVQPIIWNY 474

Query: 431 DHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           DH L+LYPTPH IVLGDRSKQ+AFKYTGITCFNPGSF+++STFVAYRPCNQEVELSAL
Sbjct: 475 DHSLYLYPTPHTIVLGDRSKQKAFKYTGITCFNPGSFSSESTFVAYRPCNQEVELSAL 531

[Close]

BLAST of Cucsa.054690 vs. NCBI nr
Match: gi|225455720|ref|XP_002267181.1| (PREDICTED: DNA polymerase epsilon subunit 2 [Vitis vinifera])

HSP 1 Score: 781.9 bits (2018), Expect = 6.2e-223
Identity = 374/474 (78.90%), Postives = 427/474 (90.08%), Query Frame = 1


Query: 11  AVKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL 70
           ++KS ILDK++VHRV+S+++ A+   EE+P  I++ SAL I++AF + KF YDPIKKIF 
Sbjct: 54  SLKSSILDKESVHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYDPIKKIFY 113

Query: 71  -HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV 130
            +T  L IHGDASAK+ALYR+RFLLL QRLSRDQHFSKPAFD  MSHFGSCEISPIQSL+
Sbjct: 114 ENTGRLAIHGDASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTEMSHFGSCEISPIQSLI 173

Query: 131 GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGI 190
           GQTG++WVMGVISQ+EDGHF+LEDLTASVEINLS+AKITTG F+ENTIIVAEGEM ++GI
Sbjct: 174 GQTGKRWVMGVISQLEDGHFFLEDLTASVEINLSNAKITTGFFSENTIIVAEGEMFLDGI 233

Query: 191 FQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWL 250
           FQV TCGFPPLE+R +SL  L+G DFFG G L +EETLR A LEKKAVNDMFVILSD+WL
Sbjct: 234 FQVSTCGFPPLEDRDESLASLSGLDFFGGGTLTREETLRLAGLEKKAVNDMFVILSDVWL 293

Query: 251 DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA 310
           D+EE MGKL T+LDG+ENVEVVPSLF+ MGNFCSHPCN++F+SFSSLRLQFGKLG+MIA+
Sbjct: 294 DNEETMGKLATVLDGYENVEVVPSLFIFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAS 353

Query: 311 HPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQE 370
           HPRL EHS+FLFIPGPDDAGPSTVLPRCALP YLTEE + ++ NAIFSSNPCR++FYTQE
Sbjct: 354 HPRLKEHSQFLFIPGPDDAGPSTVLPRCALPNYLTEEFKKYIPNAIFSSNPCRIKFYTQE 413

Query: 371 IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL 430
           IV FRQDLLYRMRRSCL+PPS EETSDPFEHLVATITHQSHLCPLPL +QPIIWNYDHCL
Sbjct: 414 IVLFRQDLLYRMRRSCLVPPSPEETSDPFEHLVATITHQSHLCPLPLSVQPIIWNYDHCL 473

Query: 431 HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           HLYP PH IVLGDRS+Q+AFKYTGI CFNPGSF+N+STFVAYRPC QEVELSAL
Sbjct: 474 HLYPNPHTIVLGDRSEQKAFKYTGIMCFNPGSFSNESTFVAYRPCTQEVELSAL 527

[Close]

BLAST of Cucsa.054690 vs. NCBI nr
Match: gi|1012175509|ref|XP_015966828.1| (PREDICTED: DNA polymerase epsilon subunit 2 [Arachis duranensis])

HSP 1 Score: 781.2 bits (2016), Expect = 1.1e-222
Identity = 379/479 (79.12%), Postives = 432/479 (90.19%), Query Frame = 1


Query: 7   LAIVAVKSPILDKDAVHRVISIMVAADKVGEESPNTITST-SALCIINAFDIPKFRYDPI 66
           L + + KS I++K+ VHRV+S ++ AD   EES +  ++  SA+ +++AF +PKFRYDPI
Sbjct: 53  LELESQKSTIIEKEPVHRVVSRLLEADAAVEESSDPCSAGGSAIRVVDAFLVPKFRYDPI 112

Query: 67  KKIFL-HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISP 126
           +K F  HT +LPIHGDASAKAALYRDRFLLL QRLSRDQ+FSKPAF+   SHFGSCEISP
Sbjct: 113 RKQFYEHTGSLPIHGDASAKAALYRDRFLLLFQRLSRDQNFSKPAFESEFSHFGSCEISP 172

Query: 127 IQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEM 186
           IQSLVGQTGRKWVMGVISQ+EDGHFYLEDLTASVEINLS+AKITTG F+ENTI+VAEGEM
Sbjct: 173 IQSLVGQTGRKWVMGVISQLEDGHFYLEDLTASVEINLSNAKITTGFFSENTIVVAEGEM 232

Query: 187 LVEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVIL 246
           L  GIFQV+TCGFPPLE+R KSL+ +AG DFFG G L KEET+R AD+EKKAVNDMFVIL
Sbjct: 233 LASGIFQVLTCGFPPLEDRDKSLRQIAGHDFFGSGTLTKEETIRLADMEKKAVNDMFVIL 292

Query: 247 SDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLG 306
           SDIWLD+EEAMGKLET+LDGFE+VEVVPSLFV MGNF SHPCN+AF+++S+LR QFGKLG
Sbjct: 293 SDIWLDNEEAMGKLETVLDGFESVEVVPSLFVFMGNFSSHPCNLAFHAYSTLRSQFGKLG 352

Query: 307 KMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVR 366
           ++IAAHPRL EHSKFLFIPGPDDAGPSTVLPR ALPKYLTEELQ H+ NAIFSSNPCRV+
Sbjct: 353 QLIAAHPRLTEHSKFLFIPGPDDAGPSTVLPRRALPKYLTEELQNHIPNAIFSSNPCRVK 412

Query: 367 FYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWN 426
           FYTQEIVFFRQD+LYRMRRSCL+PPS EET DPF+HLVAT+THQSHLCPLPL +QPIIWN
Sbjct: 413 FYTQEIVFFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATMTHQSHLCPLPLTVQPIIWN 472

Query: 427 YDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 484
           YDHCL+LYPTPH+IVLGDRS+Q+AFKYTGITCFN GSF+ DSTFVAYRPC+QEVELSAL
Sbjct: 473 YDHCLYLYPTPHMIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSAL 531

The following BLAST results are available for this feature:

BLAST of Cucsa.054690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DPB2_ARATH	4.1e-198	72.03	DNA polymerase epsilon subunit B OS=Arabidopsis thaliana GN=DPB2 PE=1 SV=1	[more]
DPOE2_DICDI	1.2e-80	37.39	DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum GN=pole2 PE=3 SV=1	[more]
DPOE2_CHICK	9.7e-75	36.91	DNA polymerase epsilon subunit 2 OS=Gallus gallus GN=POLE2 PE=2 SV=1	[more]
DPOE2_BOVIN	2.6e-72	34.36	DNA polymerase epsilon subunit 2 OS=Bos taurus GN=POLE2 PE=2 SV=1	[more]
DPOE2_MOUSE	2.9e-71	33.95	DNA polymerase epsilon subunit 2 OS=Mus musculus GN=Pole2 PE=2 SV=2	[more]

BLAST of Cucsa.054690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067DVL2_CITSI	1.7e-222	78.90	DNA polymerase epsilon subunit 2 OS=Citrus sinensis GN=CISIN_1g009713mg PE=3 SV=...	[more]
A0A059AW13_EUCGR	1.8e-221	77.52	DNA polymerase epsilon subunit 2 OS=Eucalyptus grandis GN=EUGRSUZ_H00594 PE=3 SV...	[more]
V4T327_9ROSI	4.1e-221	78.48	DNA polymerase epsilon subunit 2 OS=Citrus clementina GN=CICLE_v10019690mg PE=3 ...	[more]
A0A067K917_JATCU	5.3e-221	78.57	DNA polymerase epsilon subunit 2 OS=Jatropha curcas GN=JCGZ_13167 PE=3 SV=1	[more]
A0A061FWB8_THECC	8.5e-219	78.56	DNA polymerase epsilon subunit B2 isoform 1 OS=Theobroma cacao GN=TCM_013360 PE=...	[more]

BLAST of Cucsa.054690 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22110.1	2.3e-199	72.03	DNA polymerase epsilon subunit B2	[more]

BLAST of Cucsa.054690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778660923\|ref\|XP_011657177.1\|	1.8e-275	99.58	PREDICTED: DNA polymerase epsilon subunit 2 [Cucumis sativus]	[more]
gi\|659066275\|ref\|XP_008463560.1\|	1.2e-258	93.88	PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo]	[more]
gi\|1009133442\|ref\|XP_015883902.1\|	1.9e-224	80.33	PREDICTED: DNA polymerase epsilon subunit 2 [Ziziphus jujuba]	[more]
gi\|225455720\|ref\|XP_002267181.1\|	6.2e-223	78.90	PREDICTED: DNA polymerase epsilon subunit 2 [Vitis vinifera]	[more]
gi\|1012175509\|ref\|XP_015966828.1\|	1.1e-222	79.12	PREDICTED: DNA polymerase epsilon subunit 2 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007185	DNA_pol_alpha/epsilon_bsu
IPR016266	POLE2

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003887	DNA-directed DNA polymerase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006260	DNA replication
GO:0006261	DNA-dependent DNA replication

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006260	DNA replication
cellular_component	GO:0008622	epsilon DNA polymerase complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.054690.1	Cucsa.054690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007185	DNA polymerase alpha/epsilon, subunit B	PFAM	PF04042	DNA_pol_E_B	coord: 241..449 score: 3.4
IPR016266	DNA polymerase epsilon, subunit B	PIR	PIRSF000799	DNA_pol_epsilon_2	coord: 10..483 score: 1.5E
None	No IPR available	PANTHER	PTHR12708	DNA POLYMERASE EPSILON SUBUNIT B	coord: 12..483 score: 3.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.054690	Csa1G434690	Cucumber (Chinese Long) v2	cgycuB039
Cucsa.054690	CsaV3_1G032270	Cucumber (Chinese Long) v3	cgycucB042

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.054690	Wild cucumber (PI 183967)	cgycpiB040