CSPI07G14340.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGCATTGCTTCCTCGTCTTCTACTGTGTATCAACCTTCAAGAAGAACCTTATCATTCGACCTTTACTTATTTATCTTGTTCCTCTTCCAACATGGCTAGCACTGACGTAGATGCTCTTGCCTCATCTTTTTCGGTGGAGAAACAATTTGAGCATTTCAGAGCTCAACTTCAAGATTCTGGGAGCTTATGTGACCGCATTCGAAGTGTGGCTATGGAGATCGAGTCATCCACGAGGTTGATGCACGCTAGCTTGCTTTTGATTCATCATTCTCGTCTCACTCCTGGAATTGAATTTTTATTTGCATGA ATGCTTGCATTGCTTCCTCGTCTTCTACTGTGTATCAACCTTCAAGAAGAACCTTATCATTCGACCTTTACTTATTTATCTTGTTCCTCTTCCAACATGGCTAGCACTGACGTAGATGCTCTTGCCTCATCTTTTTCGGTGGAGAAACAATTTGAGCATTTCAGAGCTCAACTTCAAGATTCTGGGAGCTTATGTGACCGCATTCGAAGTGTGGCTATGGAGATCGAGTCATCCACGAGGTTGATGCACGCTAGCTTGCTTTTGATTCATCATTCTCGTCTCACTCCTGGAATTGAATTTTTATTTGCATGA ATGCTTGCATTGCTTCCTCGTCTTCTACTGTGTATCAACCTTCAAGAAGAACCTTATCATTCGACCTTTACTTATTTATCTTGTTCCTCTTCCAACATGGCTAGCACTGACGTAGATGCTCTTGCCTCATCTTTTTCGGTGGAGAAACAATTTGAGCATTTCAGAGCTCAACTTCAAGATTCTGGGAGCTTATGTGACCGCATTCGAAGTGTGGCTATGGAGATCGAGTCATCCACGAGGTTGATGCACGCTAGCTTGCTTTTGATTCATCATTCTCGTCTCACTCCTGGAATTGAATTTTTATTTGCATGA
BLAST of CSPI07G14340.1 vs. TrEMBL
Match: A0A0A0K567_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342760 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 7.0e-46 Identity = 100/103 (97.09%), Postives = 100/103 (97.09%), Query Frame = 1
BLAST of CSPI07G14340.1 vs. TrEMBL
Match: A0A0A0LE08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G740110 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 7.6e-24 Identity = 65/92 (70.65%), Postives = 73/92 (79.35%), Query Frame = 1
BLAST of CSPI07G14340.1 vs. TrEMBL
Match: A0A061ESQ4_THECC (Translin family protein isoform 2 OS=Theobroma cacao GN=TCM_022191 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 5.4e-14 Identity = 48/81 (59.26%), Postives = 60/81 (74.07%), Query Frame = 1
BLAST of CSPI07G14340.1 vs. TrEMBL
Match: A0A061ES44_THECC (Translin family protein isoform 1 OS=Theobroma cacao GN=TCM_022191 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 5.4e-14 Identity = 48/81 (59.26%), Postives = 60/81 (74.07%), Query Frame = 1
BLAST of CSPI07G14340.1 vs. TrEMBL
Match: F6HR38_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g01630 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.5e-11 Identity = 41/81 (50.62%), Postives = 58/81 (71.60%), Query Frame = 1
BLAST of CSPI07G14340.1 vs. TAIR10
Match: AT2G37020.2 (AT2G37020.2 Translin family protein) HSP 1 Score: 65.5 bits (158), Expect = 2.3e-11 Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = 1
BLAST of CSPI07G14340.1 vs. NCBI nr
Match: gi|700189375|gb|KGN44608.1| (hypothetical protein Csa_7G342760 [Cucumis sativus]) HSP 1 Score: 191.0 bits (484), Expect = 1.0e-45 Identity = 100/103 (97.09%), Postives = 100/103 (97.09%), Query Frame = 1
BLAST of CSPI07G14340.1 vs. NCBI nr
Match: gi|449440117|ref|XP_004137831.1| (PREDICTED: translin [Cucumis sativus]) HSP 1 Score: 117.9 bits (294), Expect = 1.1e-23 Identity = 65/92 (70.65%), Postives = 73/92 (79.35%), Query Frame = 1
BLAST of CSPI07G14340.1 vs. NCBI nr
Match: gi|659084066|ref|XP_008442689.1| (PREDICTED: translin [Cucumis melo]) HSP 1 Score: 110.5 bits (275), Expect = 1.7e-21 Identity = 63/82 (76.83%), Postives = 67/82 (81.71%), Query Frame = 1
BLAST of CSPI07G14340.1 vs. NCBI nr
Match: gi|590630758|ref|XP_007027368.1| (Translin family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 85.1 bits (209), Expect = 7.8e-14 Identity = 48/81 (59.26%), Postives = 60/81 (74.07%), Query Frame = 1
BLAST of CSPI07G14340.1 vs. NCBI nr
Match: gi|590630761|ref|XP_007027369.1| (Translin family protein isoform 2 [Theobroma cacao]) HSP 1 Score: 85.1 bits (209), Expect = 7.8e-14 Identity = 48/81 (59.26%), Postives = 60/81 (74.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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