CSPI06G02870.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCACTAATATAAACCCTCCCTCTCCTCTATTTCTACGAAGAGAATAAGAAATTAGAGAACGCTGGAATTAAATAATGGCGAAAACAAAATTGAGTGTCATGGTGGTAGTGCTGGCGGTGGCTTTGGTGGCTTTGGTGGCTTTGGTGGAAGGATATGGGGGGAGAGTAGGAGGAAGGATGGAGGTTAAAGACGTGAGGAGGAACGAGGAGGTGCAGCGATTAGGAAGATTCAGCGTGGAGGAGTACAATCGTAGGATGGGAGGCGGGGGAGAGGTGAAGTTCACGGCGGTAGTTGCGGCGGAGAGGCAAGTGGTGTCGGGAACGAAATACTATTTGAGAATTTTGGGGACTCAAAATGGGGAGAGGAAAGTTTTTGATTCGGTTGTGATTGTGAAGCCTTGGATTGGTTCTAAGCGCCTTCTCGACTTTTCTCCTTCCGCAGTTTTTAGAACTCCCATTTTTAATTTTTGATTTCTTTTTTTTTCTTATTTTCTTGGGAAAATGGAGTTTTCTTTTCTTTCTCAGAGTTGTGAAGCAGAAGAGGAGCTGTAAATTTTTCTTCTTTCTTCCCAGTGAGCAATAAGAAATAAGTATGAGTTTAAA ATGGCGAAAACAAAATTGAGTGTCATGGTGGTAGTGCTGGCGGTGGCTTTGGTGGCTTTGGTGGCTTTGGTGGAAGGATATGGGGGGAGAGTAGGAGGAAGGATGGAGGTTAAAGACGTGAGGAGGAACGAGGAGGTGCAGCGATTAGGAAGATTCAGCGTGGAGGAGTACAATCGTAGGATGGGAGGCGGGGGAGAGGTGAAGTTCACGGCGGTAGTTGCGGCGGAGAGGCAAGTGGTGTCGGGAACGAAATACTATTTGAGAATTTTGGGGACTCAAAATGGGGAGAGGAAAGTTTTTGATTCGGTTGTGATTGTGAAGCCTTGGATTGGTTCTAAGCGCCTTCTCGACTTTTCTCCTTCCGCAGTTTTTAGAACTCCCATTTTTAATTTTTGA ATGGCGAAAACAAAATTGAGTGTCATGGTGGTAGTGCTGGCGGTGGCTTTGGTGGCTTTGGTGGCTTTGGTGGAAGGATATGGGGGGAGAGTAGGAGGAAGGATGGAGGTTAAAGACGTGAGGAGGAACGAGGAGGTGCAGCGATTAGGAAGATTCAGCGTGGAGGAGTACAATCGTAGGATGGGAGGCGGGGGAGAGGTGAAGTTCACGGCGGTAGTTGCGGCGGAGAGGCAAGTGGTGTCGGGAACGAAATACTATTTGAGAATTTTGGGGACTCAAAATGGGGAGAGGAAAGTTTTTGATTCGGTTGTGATTGTGAAGCCTTGGATTGGTTCTAAGCGCCTTCTCGACTTTTCTCCTTCCGCAGTTTTTAGAACTCCCATTTTTAATTTTTGA
BLAST of CSPI06G02870.1 vs. Swiss-Prot
Match: CYT4_ORYSJ (Cysteine proteinase inhibitor 4 OS=Oryza sativa subsp. japonica GN=Os01g0915200 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 4.0e-23 Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. Swiss-Prot
Match: CYTB_HELAN (Cysteine proteinase inhibitor B OS=Helianthus annuus PE=1 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 9.3e-20 Identity = 50/97 (51.55%), Postives = 72/97 (74.23%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. Swiss-Prot
Match: CYT5_ORYSJ (Cysteine proteinase inhibitor 5 OS=Oryza sativa subsp. japonica GN=Os01g0915401 PE=3 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 2.1e-19 Identity = 51/100 (51.00%), Postives = 67/100 (67.00%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. Swiss-Prot
Match: CYT10_ORYSJ (Cysteine proteinase inhibitor 10 OS=Oryza sativa subsp. japonica GN=Os04g0350100 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 9.6e-17 Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. Swiss-Prot
Match: CYT10_ORYSI (Cysteine proteinase inhibitor 10 OS=Oryza sativa subsp. indica GN=OsI_014908 PE=3 SV=2) HSP 1 Score: 87.8 bits (216), Expect = 9.6e-17 Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. TrEMBL
Match: A0A0A0KC20_CUCSA (Cysteine proteinase inhibitor OS=Cucumis sativus GN=Csa_6G022340 PE=3 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 2.9e-60 Identity = 128/131 (97.71%), Postives = 128/131 (97.71%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. TrEMBL
Match: A0A059VDR2_9ROSA (Cysteine proteinase inhibitor OS=Malus prunifolia PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 5.1e-25 Identity = 62/116 (53.45%), Postives = 84/116 (72.41%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. TrEMBL
Match: Q84XY6_MALDO (Cysteine proteinase inhibitor OS=Malus domestica PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 5.1e-25 Identity = 62/116 (53.45%), Postives = 84/116 (72.41%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. TrEMBL
Match: A0A058ZX43_EUCGR (Cysteine proteinase inhibitor OS=Eucalyptus grandis GN=EUGRSUZ_L00642 PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.9e-24 Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. TrEMBL
Match: M5XGL1_PRUPE (Cysteine proteinase inhibitor OS=Prunus persica GN=PRUPE_ppa013391mg PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.5e-24 Identity = 63/118 (53.39%), Postives = 86/118 (72.88%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. TAIR10
Match: AT2G31980.1 (AT2G31980.1 PHYTOCYSTATIN 2) HSP 1 Score: 83.2 bits (204), Expect = 1.3e-16 Identity = 52/136 (38.24%), Postives = 86/136 (63.24%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. TAIR10
Match: AT5G47550.1 (AT5G47550.1 Cystatin/monellin superfamily protein) HSP 1 Score: 61.6 bits (148), Expect = 4.1e-10 Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. TAIR10
Match: AT2G40880.1 (AT2G40880.1 cystatin A) HSP 1 Score: 60.1 bits (144), Expect = 1.2e-09 Identity = 29/92 (31.52%), Postives = 57/92 (61.96%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. TAIR10
Match: AT3G12490.2 (AT3G12490.2 cystatin B) HSP 1 Score: 58.9 bits (141), Expect = 2.7e-09 Identity = 39/128 (30.47%), Postives = 77/128 (60.16%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. TAIR10
Match: AT4G16500.1 (AT4G16500.1 Cystatin/monellin superfamily protein) HSP 1 Score: 57.8 bits (138), Expect = 6.0e-09 Identity = 40/112 (35.71%), Postives = 68/112 (60.71%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. NCBI nr
Match: gi|449441532|ref|XP_004138536.1| (PREDICTED: cysteine proteinase inhibitor B [Cucumis sativus]) HSP 1 Score: 239.2 bits (609), Expect = 4.1e-60 Identity = 128/131 (97.71%), Postives = 128/131 (97.71%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. NCBI nr
Match: gi|659131010|ref|XP_008465470.1| (PREDICTED: cysteine proteinase inhibitor B [Cucumis melo]) HSP 1 Score: 213.8 bits (543), Expect = 1.8e-52 Identity = 112/131 (85.50%), Postives = 119/131 (90.84%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. NCBI nr
Match: gi|657953919|ref|XP_008365221.1| (PREDICTED: cysteine proteinase inhibitor B-like [Malus domestica]) HSP 1 Score: 122.1 bits (305), Expect = 7.3e-25 Identity = 62/116 (53.45%), Postives = 84/116 (72.41%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. NCBI nr
Match: gi|694406755|ref|XP_009378164.1| (PREDICTED: cysteine proteinase inhibitor B-like [Pyrus x bretschneideri]) HSP 1 Score: 120.9 bits (302), Expect = 1.6e-24 Identity = 62/119 (52.10%), Postives = 84/119 (70.59%), Query Frame = 1
BLAST of CSPI06G02870.1 vs. NCBI nr
Match: gi|694396663|ref|XP_009373605.1| (PREDICTED: cysteine proteinase inhibitor B-like [Pyrus x bretschneideri]) HSP 1 Score: 120.9 bits (302), Expect = 1.6e-24 Identity = 61/116 (52.59%), Postives = 83/116 (71.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
|