CSPI03G08160.1 (mRNA) Wild cucumber (PI 183967)

Overview
NameCSPI03G08160.1
TypemRNA
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 6948420 .. 6948587 (-)
Sequence length168
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAAACCTTGTAAAAGGCCTCCTGAGCAGGCAGCTGAAAATGGGGTAAGGGCAGATTCGATGAAGAACCCTCAGATGCAAGTGGAAAAGCAAAAGGGAGTGAAGGAAATGAGAAACAGAGCAACCCCTTTTATCATTCAAGCAGTGGAATCAGAATGGGGATGA

mRNA sequence

ATGAACAAACCTTGTAAAAGGCCTCCTGAGCAGGCAGCTGAAAATGGGGTAAGGGCAGATTCGATGAAGAACCCTCAGATGCAAGTGGAAAAGCAAAAGGGAGTGAAGGAAATGAGAAACAGAGCAACCCCTTTTATCATTCAAGCAGTGGAATCAGAATGGGGATGA

Coding sequence (CDS)

ATGAACAAACCTTGTAAAAGGCCTCCTGAGCAGGCAGCTGAAAATGGGGTAAGGGCAGATTCGATGAAGAACCCTCAGATGCAAGTGGAAAAGCAAAAGGGAGTGAAGGAAATGAGAAACAGAGCAACCCCTTTTATCATTCAAGCAGTGGAATCAGAATGGGGATGA
Homology
[Close]
BLAST of CSPI03G08160.1 vs. TrEMBL
Match: A0A0A0L5Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119800 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.5e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG 56
          MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG
Sbjct: 1  MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG 55

[Close]
BLAST of CSPI03G08160.1 vs. NCBI nr
Match: gi|700201316|gb|KGN56449.1| (hypothetical protein Csa_3G119800 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 6.5e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG 56
          MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG
Sbjct: 1  MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG 55

The following BLAST results are available for this feature:
BLAST of CSPI03G08160.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G08160.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5Z7_CUCSA4.5e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119800 PE=4 SV=1[more]
BLAST of CSPI03G08160.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G08160.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201316|gb|KGN56449.1|6.5e-23100.00hypothetical protein Csa_3G119800 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI03G08160CSPI03G08160gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI03G08160.1CSPI03G08160.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI03G08160.1.cds1CSPI03G08160.1.cds1CDS