CSPI02G08500.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGAGGATGAAAAAATAGTTGAACTTAATGTTCGTGTTCTGGACTCATCAAATGCATCTTTTACTCTTGGGGAAAAGCTTTCTAATACAAAATTGGTAAGGAAAGCCTTAAGATCTCTTTCTTCTCAATTTAATATGAAAGTCATTACAATAGAGGAAGCTAATGATATTACTACCATAAGACTTGATAAGTTATTTGGATCTTTAAGAACTTTTGAACTATCTTTTGATGATAATACATCGAAGAAGGAAAGTAGTATTTTGTTCCAAGGTGTAAGTGATGATGCTGCAAATCTATCCAGAAAACAACTCATAATGAGAATCTTGTAG ATGGCTGAGGATGAAAAAATAGTTGAACTTAATGTTCGTGTTCTGGACTCATCAAATGCATCTTTTACTCTTGGGGAAAAGCTTTCTAATACAAAATTGGTAAGGAAAGCCTTAAGATCTCTTTCTTCTCAATTTAATATGAAAGTCATTACAATAGAGGAAGCTAATGATATTACTACCATAAGACTTGATAAGTTATTTGGATCTTTAAGAACTTTTGAACTATCTTTTGATGATAATACATCGAAGAAGGAAAGTAGTATTTTGTTCCAAGGTGTAAGTGATGATGCTGCAAATCTATCCAGAAAACAACTCATAATGAGAATCTTGTAG ATGGCTGAGGATGAAAAAATAGTTGAACTTAATGTTCGTGTTCTGGACTCATCAAATGCATCTTTTACTCTTGGGGAAAAGCTTTCTAATACAAAATTGGTAAGGAAAGCCTTAAGATCTCTTTCTTCTCAATTTAATATGAAAGTCATTACAATAGAGGAAGCTAATGATATTACTACCATAAGACTTGATAAGTTATTTGGATCTTTAAGAACTTTTGAACTATCTTTTGATGATAATACATCGAAGAAGGAAAGTAGTATTTTGTTCCAAGGTGTAAGTGATGATGCTGCAAATCTATCCAGAAAACAACTCATAATGAGAATCTTGTAG
BLAST of CSPI02G08500.1 vs. TrEMBL
Match: W9R3W7_9ROSA (Receptor-like protein 12 OS=Morus notabilis GN=L484_021844 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.1e-16 Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 1
BLAST of CSPI02G08500.1 vs. TrEMBL
Match: O65147_SOYBN (Gag-pol polyprotein OS=Glycine max GN=pol PE=4 SV=2) HSP 1 Score: 88.2 bits (217), Expect = 6.9e-15 Identity = 48/96 (50.00%), Postives = 67/96 (69.79%), Query Frame = 1
BLAST of CSPI02G08500.1 vs. TrEMBL
Match: V9H042_SOYBN (Gag-protease polyprotein OS=Glycine max PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.2e-14 Identity = 47/96 (48.96%), Postives = 67/96 (69.79%), Query Frame = 1
BLAST of CSPI02G08500.1 vs. TrEMBL
Match: Q84VH6_SOYBN (Gag-pol polyprotein OS=Glycine max GN=gag-pol PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.0e-14 Identity = 47/96 (48.96%), Postives = 67/96 (69.79%), Query Frame = 1
BLAST of CSPI02G08500.1 vs. TrEMBL
Match: Q84VI0_SOYBN (Gag-pol polyprotein OS=Glycine max GN=gag-pol PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 5.8e-14 Identity = 46/96 (47.92%), Postives = 66/96 (68.75%), Query Frame = 1
BLAST of CSPI02G08500.1 vs. NCBI nr
Match: gi|659072224|ref|XP_008464095.1| (PREDICTED: uncharacterized protein LOC103502061 [Cucumis melo]) HSP 1 Score: 104.4 bits (259), Expect = 1.3e-19 Identity = 58/86 (67.44%), Postives = 65/86 (75.58%), Query Frame = 1
BLAST of CSPI02G08500.1 vs. NCBI nr
Match: gi|659129626|ref|XP_008464761.1| (PREDICTED: uncharacterized protein LOC103502566 [Cucumis melo]) HSP 1 Score: 101.7 bits (252), Expect = 8.6e-19 Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = 1
BLAST of CSPI02G08500.1 vs. NCBI nr
Match: gi|659109377|ref|XP_008454684.1| (PREDICTED: uncharacterized protein LOC103495039 [Cucumis melo]) HSP 1 Score: 97.1 bits (240), Expect = 2.1e-17 Identity = 52/95 (54.74%), Postives = 67/95 (70.53%), Query Frame = 1
BLAST of CSPI02G08500.1 vs. NCBI nr
Match: gi|659087166|ref|XP_008444307.1| (PREDICTED: uncharacterized protein LOC103487675 [Cucumis melo]) HSP 1 Score: 93.6 bits (231), Expect = 2.3e-16 Identity = 53/108 (49.07%), Postives = 72/108 (66.67%), Query Frame = 1
BLAST of CSPI02G08500.1 vs. NCBI nr
Match: gi|703072544|ref|XP_010089312.1| (Receptor-like protein 12 [Morus notabilis]) HSP 1 Score: 93.2 bits (230), Expect = 3.1e-16 Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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