CSPI01G25970.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTACAAAACACAAACTCTCCTCCTCCCTTTGATCATCTTCAAGGTCCACCCAACATAATCTGCGGCCTCTCTTTTCCTTATGGGTACAGTCTGATCTCTCATTAGTTTCATTCTTTTGGACTATAATGTATGGATCTAAGCCTAATTTATTGTTTTCTCTCCTTCTATTTTCACAGCTCTGGAGTTGGACCTGAGGTTTCAATTCCTCGATCCTGGGCTCATCTTGAAAATTTTCTTCGTGGGGTGGTATGCATGTTATGCCTAATATTATTTCAAACTTTTTGTTAATTATTAAGCTCATGTGTGTATGGTAAATTTAATTTCAGATACGGGAGGAGGTGGAGGCAAAGGTTGAAGCTCACTTTTTTAGGGTCAAAGAAGGAAAAGAAGGCAGTGGTGATGGTGGTGGATCTGGGGGAACAAATGAGAATTTGAGGCTACGTTTCAGGAGCAAGATTCCATCCATCGTCTACACTGCAAATAACATCGAAGCCAAGAATGGGGAGGAGCTGGGTGTTGAATTATTTGATGTTGTTAATGATCGCATCATTGACGTTACTCATCCATTGTCGTCGGCGTCGATTGAGGTTGTTGTCCTTGACGGAGAATTCAACGACGGGGAAGCAATAACTCAATCGGATTTCAACAGAAGTATTGTGCCACAAAGGCTGGGAGAACGACTTTTGTTGATTGGTGATGATAAGAGTTTTCGTTTAGAAAATGGTGTTTATTCCATCACCAATTTGTCATTCACTACAAACTCAAGCAGGAGCAGAACCAAGAAGATTTGTTTGGGATTGAGGGTTAAACATGACTCCAACAACAACTATCCTACAGTCGGATACGCCGTGTCCAATCCTTTTAGAGTGAAGGATCACCGAGGCCAACGTACGTATCTTGAGTCGTCGTTCTGCTAGAGCTGAGCTGCATCCATCTTTTCATTTTTATTTACAATATCCTAATTATTTTTTTATATGTACATCTAACAGCGAACAAGAAACACCATCCTCCGGGAGGAGAAGATGAAGTATGGAGATTGGAAGGGATCGCGCGAAATGGCGAATATCACAAGCGTCTAACTTCCCATGGTATAATAAATGTGGATGCTTTTGTGAAGGCTCATCAAAATGACTCTCGTTCTCTAAGAAAGGTATAATACACACACATATATATACATATACATATATATAGAATAATTGTGATATTAATTTGGGGTAATTTTGATGCACAGTGGTTAGGGAATAGACTTTCAGACAGACAATGGAAGACAATGGTAAAGCAAGCTCTTCAATATGTTCCTATCACCATCCCCACTTTTGATCCACCAAACTTACAGGTATTTTCTGTTATGCAATAAACTCATCGTTCTTCCTTCAAATTCATGATAATTATTTTGATAATATTATATGTAAAAAATAAAGCAGGAAAATTTGGAGCTGCAAAATGAAGCCATGGATCAAAATGCATCTGTTTTCAACCAAAACAATATTGGTGCAAGTAATGGAAATTATGAGTTCCAAAATCAAACATTGTTGGGCAATTTTCACGACTTTTCCTTTAATCATCTCACATCTGAAGGTATATTTTTCCCTCCTTTTATTTTAATTGATCATCATAAAAAATAAAAAAAAAATCAATATCTCTTGAAATTATTATAATTTACTTGATGTCTATATCATTATTAAAAATGAAAACCATATAATAATATTGTGTTTCTTTTTATTAATTCTGTAGATCATTATAATTACACAATACAAACATTGTTGGCACCTGGAGAAGCTTCAACCTCAAATGCCCAAAACATAAACAATTATGATGAAAATACAAGTACATGTAACCCATACTTCCAAGGAACTTGGAACAAGTTGGTCCCCAAACCCAAATGATTCAAAATAATAATACTGCTCTTAAAATCAAACTAAGATATATATGAACCAATAACATCATATCTTGACTTTGGAATGTGATGAATTGTGCTACATTTGTGTCAACATAGTTGAGATATTTAAGTGTACGGACGGGTCCCTTCTTCCAATGTAAACAAGTTTGTAAGATATAGATCAAGTCTATAACGTTTGTTTTTAGTTTGGGATATGACGAAGGTGTTATAGATGTGTCGACTTAGTTACGTTGGGATATTTTAGTAGTCCTACCGATCCCTTTTATGTT ATGGTACAAAACACAAACTCTCCTCCTCCCTTTGATCATCTTCAAGGTCCACCCAACATAATCTGCGGCCTCTCTTTTCCTTATGGCTCTGGAGTTGGACCTGAGGTTTCAATTCCTCGATCCTGGGCTCATCTTGAAAATTTTCTTCGTGGGGTGATACGGGAGGAGGTGGAGGCAAAGGTTGAAGCTCACTTTTTTAGGGTCAAAGAAGGAAAAGAAGGCAGTGGTGATGGTGGTGGATCTGGGGGAACAAATGAGAATTTGAGGCTACGTTTCAGGAGCAAGATTCCATCCATCGTCTACACTGCAAATAACATCGAAGCCAAGAATGGGGAGGAGCTGGGTGTTGAATTATTTGATGTTGTTAATGATCGCATCATTGACTGGTTAGGGAATAGACTTTCAGACAGACAATGGAAGACAATGGTAAAGCAAGCTCTTCAATATGTTCCTATCACCATCCCCACTTTTGATCCACCAAACTTACAGGAAAATTTGGAGCTGCAAAATGAAGCCATGGATCAAAATGCATCTGTTTTCAACCAAAACAATATTGGTGCAAGTAATGGAAATTATGAGTTCCAAAATCAAACATTGTTGGGCAATTTTCACGACTTTTCCTTTAATCATCTCACATCTGAAGATCATTATAATTACACAATACAAACATTGTTGGCACCTGGAGAAGCTTCAACCTCAAATGCCCAAAACATAAACAATTATGATGAAAATACAAGTACATGTAACCCATACTTCCAAGGAACTTGGAACAAGTTGGTCCCCAAACCCAAATGA ATGGTACAAAACACAAACTCTCCTCCTCCCTTTGATCATCTTCAAGGTCCACCCAACATAATCTGCGGCCTCTCTTTTCCTTATGGCTCTGGAGTTGGACCTGAGGTTTCAATTCCTCGATCCTGGGCTCATCTTGAAAATTTTCTTCGTGGGGTGATACGGGAGGAGGTGGAGGCAAAGGTTGAAGCTCACTTTTTTAGGGTCAAAGAAGGAAAAGAAGGCAGTGGTGATGGTGGTGGATCTGGGGGAACAAATGAGAATTTGAGGCTACGTTTCAGGAGCAAGATTCCATCCATCGTCTACACTGCAAATAACATCGAAGCCAAGAATGGGGAGGAGCTGGGTGTTGAATTATTTGATGTTGTTAATGATCGCATCATTGACTGGTTAGGGAATAGACTTTCAGACAGACAATGGAAGACAATGGTAAAGCAAGCTCTTCAATATGTTCCTATCACCATCCCCACTTTTGATCCACCAAACTTACAGGAAAATTTGGAGCTGCAAAATGAAGCCATGGATCAAAATGCATCTGTTTTCAACCAAAACAATATTGGTGCAAGTAATGGAAATTATGAGTTCCAAAATCAAACATTGTTGGGCAATTTTCACGACTTTTCCTTTAATCATCTCACATCTGAAGATCATTATAATTACACAATACAAACATTGTTGGCACCTGGAGAAGCTTCAACCTCAAATGCCCAAAACATAAACAATTATGATGAAAATACAAGTACATGTAACCCATACTTCCAAGGAACTTGGAACAAGTTGGTCCCCAAACCCAAATGA
BLAST of CSPI01G25970.1 vs. TrEMBL
Match: A0A0A0LYD9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G568480 PE=4 SV=1) HSP 1 Score: 538.1 bits (1385), Expect = 6.0e-150 Identity = 261/264 (98.86%), Postives = 262/264 (99.24%), Query Frame = 1
BLAST of CSPI01G25970.1 vs. TrEMBL
Match: A0A0A0LVX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G568490 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.9e-47 Identity = 112/195 (57.44%), Postives = 138/195 (70.77%), Query Frame = 1
BLAST of CSPI01G25970.1 vs. NCBI nr
Match: gi|700210923|gb|KGN66019.1| (hypothetical protein Csa_1G568480 [Cucumis sativus]) HSP 1 Score: 538.1 bits (1385), Expect = 8.6e-150 Identity = 261/264 (98.86%), Postives = 262/264 (99.24%), Query Frame = 1
BLAST of CSPI01G25970.1 vs. NCBI nr
Match: gi|778662270|ref|XP_011659631.1| (PREDICTED: uncharacterized protein LOC105436210 isoform X2 [Cucumis sativus]) HSP 1 Score: 280.4 bits (716), Expect = 3.2e-72 Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 1
BLAST of CSPI01G25970.1 vs. NCBI nr
Match: gi|778662267|ref|XP_011659625.1| (PREDICTED: uncharacterized protein LOC105436210 isoform X1 [Cucumis sativus]) HSP 1 Score: 275.8 bits (704), Expect = 8.0e-71 Identity = 134/137 (97.81%), Postives = 135/137 (98.54%), Query Frame = 1
BLAST of CSPI01G25970.1 vs. NCBI nr
Match: gi|659099363|ref|XP_008450562.1| (PREDICTED: uncharacterized protein LOC103492122 isoform X2 [Cucumis melo]) HSP 1 Score: 221.5 bits (563), Expect = 1.8e-54 Identity = 114/137 (83.21%), Postives = 120/137 (87.59%), Query Frame = 1
BLAST of CSPI01G25970.1 vs. NCBI nr
Match: gi|659099365|ref|XP_008450563.1| (PREDICTED: uncharacterized protein LOC103492122 isoform X3 [Cucumis melo]) HSP 1 Score: 216.9 bits (551), Expect = 4.4e-53 Identity = 114/138 (82.61%), Postives = 120/138 (86.96%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
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