CSPI07G21650 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCGTGATTTTCCCGGTCCGCTTCAGAGTTCAGACCCACTAGCGTATCACTTGCGCTGGTCATTCAAGCTAGTTTTCGACTTGGCGTTCCGTAGTATGGACGAATGAAATTTTCTGTTTCGAGCTATCGGGAGTTTCTACAATGAGTGCAGGTACTTTGCGAATCCCGAGGGCAAGAGTGATAGCATGATTTTTTTTTCCCCATTTTTTTGTGGGTGAATTTATGTTAGTTTCGAGGAAGGTAGGGATTTGAATGGTTGAGTGAGTTAAGGTTTTCGATTGTTGTAGGTAAATTTGTAAGGTCCGGATCAGGGATCCATTCTTTTATGAGCTCGTGTTTAGTGTTTTTCGGATACCTTGGAAAATAAATAGATCTGAATATAGCTGCATATGCTGGTGTTAGAGGGGCCTAGGAGAGGAGACTGTTTTATGGCTAGCTTCTGGTATTTTTCTTTTCTTTCAAATTTATATATATATTATATAAAGAGCATAGAGTCGAGTGGCTCTGAGCCCGGGTGTATACTAAATCTTTCGGTTATCCATAGTATTTATTCTTTCATTTTTGTGGTTATGATGGCGGTTAGTAGCCGTACACTGCACAGTATACACAACCGGTAGAAGTGGAATTGAGTTGTAAGACAATCAATGGCAATGTGATTTGGATTGTAAATTTGATGGCTTGTGTTTTCCCATAAATGAATCATGATGAACCATTCTCATACCAAGCATAGGTATTAGATGAAAATGTAGAGCTAGAATGCTTCGGTGGTGCCAAGCAAGATAACCATTTTGTTTCTAATATAAAATAATTTTTTGATTTACAAATTACAATTTTATGGACGTGCATAGAATGGATGTATATATTCCTTTTCGGCTACTTTGATTTGGTGAGAGCTATTGTGATCTTTATGCAGGTGGTTCGTTTGGAGGGAATAGAGGACTGAGACCAGTACCCCCAGAGAAAGGAGTTTTCCCTTTGGATCATATGCACCTCTGCGACTTGGTAGTTTTTTTTCTTTCTTTTTAAAGCATTATAGTCATTACTAGGATATACGATATTTGGGATATTTTTACAAGGTGTCTGTGTCCATTGCTTGTTTTATGATGAATGAACTTTATTGCAGGAGAAGAAAGAATACCTCAATTGTCTTAAAACCTCTGGTCACAAATCTGAAAAATGCAGACACTTATCGAAAAGATACCTTGAATGCCGTATGGAAAAGTAAGGTTTTTGACTTTTTTATATGTTCTTTGCTCTTCTCTAGATTCATGAACTTTTATTTCTGAGAACCCGGATTATTGATTATAATTGTATTGGTCATCCTTCATCCTTAAGTTTTACACACGACTCCTCTATAATGAGTCAATGAAAAACCCTTCCACCAAACTTCTAAGAAAAAGATAGTGCTAATATTGTGATGTAAGCTCAAGTTGCATTTTGCTTTATGTGGCTCGAACAAAAGAAAGTAGGTGCACGGTTAAGTATTTCTAAGCTTTTATTACGCCAAAAATAAATTATGCTAAAAGTCTCTAAATTAAGAAATAAGTTGGACCAACACAAACACAAAAATAGAAAAAAAAAAGTATAATAGCTACAATTTCCGCTTTTCAGAGCCGTGCATTTTCTACAGCTTCACCAGTCAGCTAACCAAATTTCTTGTAGAAAATGCAAACCTTCCCTTGCTTCTCTAGCGTAGCTACGGGCTAACTAATTCATATGCTCTAAAACTTAGAACGAACCTTTCCTTCCTTTTCTAACTAATTCTATGCTCTCCCTCAGTTTAAAACTCTGGCCCTTACATTCCCTCAGCCAGAGATTTCCTCTCCCAGGGTCAAACGGATTAGGGGATAGCAAATGCGTTTAGATTCAGTTGAAGTAAATATTACTATCCCTATCGATCCTATTCCTTTGGAGAGTTGGGATACGTTGGTCAAGTGAAAATGGGAAGGTAAATGGATATAGAGTTTTCGTCTCTTTTCCTCCTCTATTATGACAAGTAAGGAGGACACACATTGTGATACCGATATGAACACTGTCACCAAAATTATTTATTGAGCTACAATATTATGGTGTTGCACAGCGGGTTTTCATTCCTATCACCAAATGCCATGCAGATTGGTGGAAGTTTTTCTCTGGGCTGCTTATGCAGTTTCCTAAAACTGTTGTTTCTTATTACACTGCTTGTATGGGTATGGTTATTCACGACATTTCATTGGAACCATGCAGGAATTTAATGGCAAAGCAAGACATGACGGAACTGGGATTTGGAAATTTGAGCCAGGCCAATTTGTCTGGCGATAAATTGGAACAACTCTAAATTGTTCATCCTTATATAACCATAGTCGAAGATTTTAGTTAGTCACTGGGTCAAGTCATCATTAACCAACCCTTCTCATCCACATTTGAAGGAACGGTACAATAATTTTTCATAATGTATTGTCCTTGATCAAAATACTCATCTTGCAGGTTTTAGTTTCTTCTTTAAAGAACAATGTCTCATTCAACGGGCCAATACTATACTACACTTCCATTGTCTTCTCCCGTGTAGTTTCAAAAGCTTTCTTTTTATTCCATTACTTGTATGTATTCATGCAAATTTCTGAACAGTGCCATTTTTGACCTTGTGTAAGATCGCATGTGTAATGTCGATTTTTCAATCTTAAGAGAAACATTCAGCTACATCTGGCTCATTCCATGTACGAAATAGTGGCTTAAATTAGATGTAAATATTGATCTTCAAAAGAATGAATTAGCACTATTACAATTGAAACTAAATAATGTTTCCTCCCAACTGTCTACGACTCCATAGTGACATCATCAGATTCATCTACCATCATCTCATCTTTGAAAAGAAGTGTCAAGTAGGGAAGAACCTTAGGAAGTACCAATAGATCTGCCACATTAACACTCATCAAATCGAATGCAATGCAAGTCTTGTGCATGTGTTTCTCATCGACCACAGGAATTTTTGGGTATCTTTGGCTGAAATGCGTAAGGATGATTCTATACGCTCCCGC ATGAGTGCAGGTGGTTCGTTTGGAGGGAATAGAGGACTGAGACCAGTACCCCCAGAGAAAGGAGTTTTCCCTTTGGATCATATGCACCTCTGCGACTTGGAGAAGAAAGAATACCTCAATTGTCTTAAAACCTCTGGTCACAAATCTGAAAAATGCAGACACTTATCGAAAAGATACCTTGAATGCCGTATGGAAAAGAATTTAATGGCAAAGCAAGACATGACGGAACTGGGATTTGGAAATTTGAGCCAGGCCAATTTGTCTGGCGATAAATTGGAACAACTCTAA ATGAGTGCAGGTGGTTCGTTTGGAGGGAATAGAGGACTGAGACCAGTACCCCCAGAGAAAGGAGTTTTCCCTTTGGATCATATGCACCTCTGCGACTTGGAGAAGAAAGAATACCTCAATTGTCTTAAAACCTCTGGTCACAAATCTGAAAAATGCAGACACTTATCGAAAAGATACCTTGAATGCCGTATGGAAAAGAATTTAATGGCAAAGCAAGACATGACGGAACTGGGATTTGGAAATTTGAGCCAGGCCAATTTGTCTGGCGATAAATTGGAACAACTCTAA
BLAST of CSPI07G21650 vs. Swiss-Prot
Match: COX19_BOVIN (Cytochrome c oxidase assembly protein COX19 OS=Bos taurus GN=COX19 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 6.5e-15 Identity = 37/82 (45.12%), Postives = 57/82 (69.51%), Query Frame = 1
BLAST of CSPI07G21650 vs. Swiss-Prot
Match: COX19_HUMAN (Cytochrome c oxidase assembly protein COX19 OS=Homo sapiens GN=COX19 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.5e-14 Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 1
BLAST of CSPI07G21650 vs. Swiss-Prot
Match: COX19_USTMA (Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=COX19 PE=3 SV=2) HSP 1 Score: 76.6 bits (187), Expect = 1.6e-13 Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 1
BLAST of CSPI07G21650 vs. Swiss-Prot
Match: COX19_SCHPO (Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cox19 PE=3 SV=2) HSP 1 Score: 76.6 bits (187), Expect = 1.6e-13 Identity = 37/78 (47.44%), Postives = 46/78 (58.97%), Query Frame = 1
BLAST of CSPI07G21650 vs. Swiss-Prot
Match: COX19_DICDI (Cytochrome c oxidase assembly protein COX19 OS=Dictyostelium discoideum GN=cox19 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.1e-13 Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 1
BLAST of CSPI07G21650 vs. TrEMBL
Match: A0A0V0GNZ6_SOLCH (Putative cytochrome c oxidase assembly protein COX19-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 3.5e-39 Identity = 79/95 (83.16%), Postives = 87/95 (91.58%), Query Frame = 1
BLAST of CSPI07G21650 vs. TrEMBL
Match: K4DFC6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 5.9e-39 Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = 1
BLAST of CSPI07G21650 vs. TrEMBL
Match: M1CIA6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026453 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 5.9e-39 Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = 1
BLAST of CSPI07G21650 vs. TrEMBL
Match: M0ZRG9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402002538 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.0e-38 Identity = 78/95 (82.11%), Postives = 87/95 (91.58%), Query Frame = 1
BLAST of CSPI07G21650 vs. TrEMBL
Match: A0A0V0H7V2_SOLCH (Putative cytochrome c oxidase assembly protein COX19-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 1.3e-38 Identity = 77/94 (81.91%), Postives = 84/94 (89.36%), Query Frame = 1
BLAST of CSPI07G21650 vs. TAIR10
Match: AT1G69750.1 (AT1G69750.1 cytochrome c oxidase 19-2) HSP 1 Score: 151.0 bits (380), Expect = 3.8e-37 Identity = 66/91 (72.53%), Postives = 78/91 (85.71%), Query Frame = 1
BLAST of CSPI07G21650 vs. TAIR10
Match: AT1G66590.2 (AT1G66590.2 cytochrome c oxidase 19-1) HSP 1 Score: 148.7 bits (374), Expect = 1.9e-36 Identity = 65/89 (73.03%), Postives = 77/89 (86.52%), Query Frame = 1
BLAST of CSPI07G21650 vs. NCBI nr
Match: gi|449448014|ref|XP_004141761.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis sativus]) HSP 1 Score: 200.3 bits (508), Expect = 1.5e-48 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1
BLAST of CSPI07G21650 vs. NCBI nr
Match: gi|659124474|ref|XP_008462179.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis melo]) HSP 1 Score: 196.1 bits (497), Expect = 2.9e-47 Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 1
BLAST of CSPI07G21650 vs. NCBI nr
Match: gi|565387355|ref|XP_006359466.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like [Solanum tuberosum]) HSP 1 Score: 167.9 bits (424), Expect = 8.5e-39 Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = 1
BLAST of CSPI07G21650 vs. NCBI nr
Match: gi|460413979|ref|XP_004252352.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like isoform X1 [Solanum lycopersicum]) HSP 1 Score: 167.9 bits (424), Expect = 8.5e-39 Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = 1
BLAST of CSPI07G21650 vs. NCBI nr
Match: gi|971542843|ref|XP_015162263.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like isoform X2 [Solanum tuberosum]) HSP 1 Score: 167.2 bits (422), Expect = 1.4e-38 Identity = 78/95 (82.11%), Postives = 87/95 (91.58%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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