Cucsa.359370 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.359370
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionCytochrome c oxidase assembly COX19
Locationscaffold03588 : 304888 .. 307566 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCGCTTCAGAGTTCAGACCCACTAGCGTATCACTTGCGCTGGTCATTCAAGCTAGTTTTCGACTTGGCGTTCCGTAGTATGGACGAATGAAATTTTCTGTTTCGAGCTATCGGGAGTTTCTACAATGAGTGCAGGTACTTTGCGAATCCCGAGGGCAAGAGTGATAGCATGATTTTTTTTTCCCCATTTTTTTGTGGGTGAATTTATGTTAGTTTCGAGGAAGGTAGGGATTTGAATGGTTGAGTGAGTTAAGGTTTTCGATTGTTGTAGGTAAATTTGTAAGGTCCGGATCAGGGATCCATTCTTTTATGAGCTCGTGTTTAGTGTTTTTCGGATACCTTGGAAAATAAATAGATCTGAATATAGCTGCATATGCTGGTGTTAGAGGGGCCTAGGAGAGGAGACTGTTTTATGGCTAGCTTCTGGTATTTTTCTTTTCTTTCAAATTTATATATATATTATATAAAGAGCATAGAGTCGAGTGGCTCTGAGCCCGGGTGTATACTAAATCTTTCGGTTATCCATAGTATTTATTCTTTCATTTTTGTGGTTATGATGGCGGTTAGTAGCCGTACACTGCACAGTATACACAACCGGTAGAAGTGGAATTTAGTTGTAAGACAATCAATGGCAATGTGATTTGGATTGTAAATTTGATGGCTTGTGTTTTCCCATAAATGAATCATGATGAACCATTCTCATACCAAGCATAGGTATTAGATGAAAATGTAGAGCTAGAATGCTTCGGTGGTGCCAAGCAAGATAACCATTTTGTTTCTAATATAAAATAATTTTTTGATTTACAAATTACAATTTTATGGACGTGCATAGAATGGATGTATATATTCCTTTTCGGCTACTTTGATTTGGTGAGAGCTATTGTGATCTTTATGCAGGTGGTTCATTTGGAGGGAATAGAGGACTGAGACCAGTACCCCCAGAGAAAGGAGTTTTCCCTTTGGATCATATGCACCTCTGCGACTTGGTAGTTTTTTTTTTTTTTTTAAAGCATTATAGTCATTACTAGGATATACGATATTTGGGATATTTTTACAAGGTGTCTGTGTCCATTGCTTGTTTTATGATGAATGAACTTTATTGCAGGAGAAGAAAGAATACCTCAACTGTCTTAAAACCTCTGGTCACAAATCTGAAAAATGCAGACACTTATCGAAAAGATACCTTGAATGCCGTATGGAAAAGTAAGGTTTTTGACTTTTTTATATGTTCTTTGCTCTTCTCTAGATTCATGAACTTTTATTTCTGAGAACCCGGATTATTGATTATAATTGTATTGGTCATCCTTCATCCTTAAGTTTTACACACGACTCCTCTATAATGAGTCAATGAAAAACCCTTCCACCAAACTTCTAAGAAAAAGATAGTGCTAATATTGTGATGTAAGCTCAAGTTGCATTTTGCTTTATGTGGCTCGAACAAAAGAAAGTAGGTGCACGGTTAAGTATTTCTAAGCTTTTATTACGCCAAAAATAAATTATGCTAAAAGTCTCTAAATTAAGAAATAAGTTGGACCAACACAAACACAAAAATAGAAAAAAAAAAGTATAATAGCTACAATTTCCGCTTTTCAGAGCCGTGCATTTTCTACAGCTTCACCAGTCAGCTAACCAAATTTATTGTAGAAAATGCGAACCTTCCCTTGCTTCTCTAGCGTAGCTACGGGCTAACTAATTCATATGCTCTAAAACTTAGAACGAACCTTTCCTTCCTTTTCTAACTAATTCTATGCTCTCCCTCAGTTTAAAACTCTGGCCCTTACATTCCCTCAGCCAGAGATTTCCTCTCCCAGGGTCAAACGGATTAGGGGATAGCAAATGGGTTTAGATTCAGTTGAAGTAAATATTACTATCCCTATCGATCCTATTCCTTTGGAGAGTTGGGATACGTTGGTCAAGTGAAAATGGGAAGGTAAATGGATATAGAGTTTTTGTCTCTTTTCCTCCTCTATTATGACAAGTAAGGAGGACACACATTGTGATACCGATATGAACACTGTCACCAAAATTATTTATTGAGCTACAATATTATGGTGTTGCACAGCGGGTTTTCATTCCTATCACCAAATGCCATGCAGATTGGTGGAAGTTTTTCTCTGGGCTGCTTATGCAGTTTCCTAAAACTGTTGTTTCTTATTACACTGCTTGTATGGGTATGGTTATTCACGACATTTCATTGGAACCATGCAGGAATTTAATGGCAAAGCAAGACATGACGGAACTGGGATTTGGAAATTTGAGCCAGGCCAATTTGTCTGGCGACAAATTGGAACAACTCTAAATTGTTCATCCTTATATAACCATAGTCGAAGATTTTAGTTAGTCACTGGGTCAAGTCATCATTAACCAACCCTTCTCATCCACATTTGAAGGGACGGTACAATAATTTTTCATAATGTATTGTCCTTGATCAAAATACTCATCTTGCAGGTTTTAGTTTCTTCTTTAAAGAACAATGTCTCATTCAACGGGCCAATACTATACTACACTTCCATTGTCTTCTCCCGTGTAGTTTCAAAAGCTTTCTTTTTATTCCATTACTTGTATGTATTCATGCAAATTTCTGAACAGTGCCATTTTTTACCTTGTGTAAGATCACGTGTAATGTCGATTTTTCAATCTTAAGAGAAACATTCAGCTACATCTGGCTCATTCCATGTA

mRNA sequence

TCCGCTTCAGAGTTCAGACCCACTAGCGTATCACTTGCGCTGGTCATTCAAGCTAGTTTTCGACTTGGCGTTCCGTAGTATGGACGAATGAAATTTTCTGTTTCGAGCTATCGGGAGTTTCTACAATGAGTGCAGGTGGTTCATTTGGAGGGAATAGAGGACTGAGACCAGTACCCCCAGAGAAAGGAGTTTTCCCTTTGGATCATATGCACCTCTGCGACTTGGAGAAGAAAGAATACCTCAACTGTCTTAAAACCTCTGGTCACAAATCTGAAAAATGCAGACACTTATCGAAAAGATACCTTGAATGCCGTATGGAAAAGAATTTAATGGCAAAGCAAGACATGACGGAACTGGGATTTGGAAATTTGAGCCAGGCCAATTTGTCTGGCGACAAATTGGAACAACTCTAAATTGTTCATCCTTATATAACCATAGTCGAAGATTTTAGTTAGTCACTGGGTCAAGTCATCATTAACCAACCCTTCTCATCCACATTTGAAGGGACGGTACAATAATTTTTCATAATGTATTGTCCTTGATCAAAATACTCATCTTGCAGGTTTTAGTTTCTTCTTTAAAGAACAATGTCTCATTCAACGGGCCAATACTATACTACACTTCCATTGTCTTCTCCCGTGTAGTTTCAAAAGCTTTCTTTTTATTCCATTACTTGTATGTATTCATGCAAATTTCTGAACAGTGCCATTTTTTACCTTGTGTAAGATCACGTGTAATGTCGATTTTTCAATCTTAAGAGAAACATTCAGCTACATCTGGCTCATTCCATGTA

Coding sequence (CDS)

ATGAGTGCAGGTGGTTCATTTGGAGGGAATAGAGGACTGAGACCAGTACCCCCAGAGAAAGGAGTTTTCCCTTTGGATCATATGCACCTCTGCGACTTGGAGAAGAAAGAATACCTCAACTGTCTTAAAACCTCTGGTCACAAATCTGAAAAATGCAGACACTTATCGAAAAGATACCTTGAATGCCGTATGGAAAAGAATTTAATGGCAAAGCAAGACATGACGGAACTGGGATTTGGAAATTTGAGCCAGGCCAATTTGTCTGGCGACAAATTGGAACAACTCTAA

Protein sequence

MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYLECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQL*
Homology
[Close]
BLAST of Cucsa.359370 vs. Swiss-Prot
Match: COX19_BOVIN (Cytochrome c oxidase assembly protein COX19 OS=Bos taurus GN=COX19 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.8e-15
Identity = 37/82 (45.12%), Postives = 57/82 (69.51%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MS   +FG ++  +P PP+KG FPLDH   C   K++++ CL+ +  ++  CR+ SK YL
Sbjct: 1  MSTAMNFG-SKSFQPRPPDKGSFPLDHFGECKSFKEKFMKCLRDNNFENALCRNESKEYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNL 83
          ECRME+ LMA++ + +LGFG+L
Sbjct: 61 ECRMERQLMAQEPLEKLGFGDL 81

[Close]
BLAST of Cucsa.359370 vs. Swiss-Prot
Match: COX19_HUMAN (Cytochrome c oxidase assembly protein COX19 OS=Homo sapiens GN=COX19 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-14
Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MS   +FG  +  +P PP+KG FPLDH+  C   K++++ CL  +  ++  CR  SK YL
Sbjct: 1  MSTAMNFG-TKSFQPRPPDKGSFPLDHLGECKSFKEKFMKCLHNNNFENALCRKESKEYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDK 92
          ECRME+ LM ++ + +LGFG+L+       K
Sbjct: 61 ECRMERKLMLQEPLEKLGFGDLTSGKSEAKK 90

[Close]
BLAST of Cucsa.359370 vs. Swiss-Prot
Match: COX19_USTMA (Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=COX19 PE=3 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 9.4e-14
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 1 

Query: 17 PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYLECRMEKNLMAKQDMTE 76
          PPE+G FPLDH   C    +EY+NC+K + + + KCRHLS+ YL+CRM+K LM + +M  
Sbjct: 16 PPERGSFPLDHDGECKSVMQEYMNCIKYNRNDNGKCRHLSRAYLQCRMDKGLMEQDNMDN 75

Query: 77 LGF 80
          LGF
Sbjct: 76 LGF 78

[Close]
BLAST of Cucsa.359370 vs. Swiss-Prot
Match: COX19_SCHPO (Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cox19 PE=3 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 9.4e-14
Identity = 37/78 (47.44%), Postives = 46/78 (58.97%), Query Frame = 1 

Query: 6  SFGGNRGLRPV----PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYLE 65
          SFG   G  P+    PPE+G FPLDH   C    K+YL C+K      E+CR L+K+YL+
Sbjct: 2  SFGAAGGSLPMTTREPPERGSFPLDHFGECTHVMKQYLECIKVKRENQEECRLLAKKYLQ 61

Query: 66 CRMEKNLMAKQDMTELGF 80
          CRM+  L  K DM  LGF
Sbjct: 62 CRMDTGLFGKDDMKNLGF 79

[Close]
BLAST of Cucsa.359370 vs. Swiss-Prot
Match: COX19_MAGOY (Cytochrome c oxidase assembly protein COX19 OS=Magnaporthe oryzae (strain Y34) GN=COX19 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-13
Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = 1 

Query: 1  MSA-GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK-TSGHKSEKCRHLSKR 60
          MSA GG  GG    +P+PP++G FPLDH   C      YL C+K   G    +CR  +K 
Sbjct: 1  MSAFGGPGGGQINQKPIPPQRGSFPLDHDGECKHVMTSYLACMKKVRGVNDNECREFAKS 60

Query: 61 YLECRMEKNLMAKQDMTELGFGNLSQANLSGD 91
          YL CRM+ NLMA+ +   LGF ++  ++  GD
Sbjct: 61 YLACRMDHNLMARDEFKNLGFQDVKDSSNKGD 92

[Close]
BLAST of Cucsa.359370 vs. TrEMBL
Match: A0A0V0GNZ6_SOLCH (Putative cytochrome c oxidase assembly protein COX19-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.6e-39
Identity = 79/95 (83.16%), Postives = 87/95 (91.58%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK++GHKSE+CRHLS++YL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSAGHKSEECRHLSRKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFG-NLSQANLSGDKLEQ 95
          ECRMEKNLMAKQDM+ELGFG N+     S DK EQ
Sbjct: 61 ECRMEKNLMAKQDMSELGFGKNVDAGTKSEDKTEQ 95

[Close]
BLAST of Cucsa.359370 vs. TrEMBL
Match: K4DFC6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.6e-39
Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGHKS+ CRHLSK+YL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQ 95
           CRMEKNLMAKQDM+ELGFG    A  S +++EQ
Sbjct: 61 VCRMEKNLMAKQDMSELGFGKNYDAETSSEEMEQ 94

[Close]
BLAST of Cucsa.359370 vs. TrEMBL
Match: M1CIA6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026453 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.6e-39
Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGHKS+ CRHLSK+YL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQ 95
           CRMEKNLMAKQDM+ELGFG    A  S +++EQ
Sbjct: 61 VCRMEKNLMAKQDMSELGFGKNYDAETSSEEMEQ 94

[Close]
BLAST of Cucsa.359370 vs. TrEMBL
Match: M0ZRG9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402002538 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 4.5e-39
Identity = 78/95 (82.11%), Postives = 87/95 (91.58%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCD+EKKEYLNCLK++GHKSE+CRHLSK+YL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDVEKKEYLNCLKSAGHKSEECRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFG-NLSQANLSGDKLEQ 95
          ECRMEKNLMAKQDM+ELGFG N+     S +K EQ
Sbjct: 61 ECRMEKNLMAKQDMSELGFGKNVDAGTKSEEKTEQ 95

[Close]
BLAST of Cucsa.359370 vs. TrEMBL
Match: A0A0V0H7V2_SOLCH (Putative cytochrome c oxidase assembly protein COX19-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.9e-39
Identity = 77/94 (81.91%), Postives = 84/94 (89.36%), Query Frame = 1 

Query: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
           MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGHKS+ CRHLSK+YL
Sbjct: 43  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 102

Query: 61  ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQ 95
            CRMEKNLMAKQDM+ELGFG    A  S ++ EQ
Sbjct: 103 VCRMEKNLMAKQDMSELGFGKNYDAETSSEETEQ 136

[Close]
BLAST of Cucsa.359370 vs. TAIR10
Match: AT1G69750.1 (AT1G69750.1 cytochrome c oxidase 19-2)

HSP 1 Score: 152.1 bits (383), Expect = 1.7e-37
Identity = 66/91 (72.53%), Postives = 78/91 (85.71%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S HKSE+CRHLSK+YL
Sbjct: 1  MSTGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDK 92
          +CRM KNLMAKQDM ELGF  + + + + DK
Sbjct: 61 QCRMAKNLMAKQDMAELGFSGVKELDSTEDK 91

[Close]
BLAST of Cucsa.359370 vs. TAIR10
Match: AT1G66590.2 (AT1G66590.2 cytochrome c oxidase 19-1)

HSP 1 Score: 150.2 bits (378), Expect = 6.4e-37
Identity = 65/89 (73.03%), Postives = 77/89 (86.52%), Query Frame = 1 

Query: 3   AGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYLEC 62
           AGG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S HKSE+CRHLSK+YL+C
Sbjct: 18  AGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYLQC 77

Query: 63  RMEKNLMAKQDMTELGFGNLSQANLSGDK 92
           RM KNLMAKQDM ELGF  + + + + DK
Sbjct: 78  RMAKNLMAKQDMAELGFSGVKELDSTEDK 106

[Close]
BLAST of Cucsa.359370 vs. NCBI nr
Match: gi|449448014|ref|XP_004141761.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 6.9e-49
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQL 96
          ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQL
Sbjct: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQL 95

[Close]
BLAST of Cucsa.359370 vs. NCBI nr
Match: gi|659124474|ref|XP_008462179.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-47
Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSK+YL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQL 96
          ECRMEKNLMAKQDMTELGFG++SQANLSGDKLEQL
Sbjct: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 95

[Close]
BLAST of Cucsa.359370 vs. NCBI nr
Match: gi|565387355|ref|XP_006359466.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like [Solanum tuberosum])

HSP 1 Score: 169.1 bits (427), Expect = 3.8e-39
Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGHKS+ CRHLSK+YL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQ 95
           CRMEKNLMAKQDM+ELGFG    A  S +++EQ
Sbjct: 61 VCRMEKNLMAKQDMSELGFGKNYDAETSSEEMEQ 94

[Close]
BLAST of Cucsa.359370 vs. NCBI nr
Match: gi|460413979|ref|XP_004252352.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like isoform X1 [Solanum lycopersicum])

HSP 1 Score: 169.1 bits (427), Expect = 3.8e-39
Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = 1 

Query: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
           MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGHKS+ CRHLSK+YL
Sbjct: 34  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 93

Query: 61  ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQ 95
            CRMEKNLMAKQDM+ELGFG    A  S +++EQ
Sbjct: 94  VCRMEKNLMAKQDMSELGFGKNYDAETSSEEMEQ 127

[Close]
BLAST of Cucsa.359370 vs. NCBI nr
Match: gi|971542843|ref|XP_015162263.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like isoform X2 [Solanum tuberosum])

HSP 1 Score: 168.3 bits (425), Expect = 6.5e-39
Identity = 78/95 (82.11%), Postives = 87/95 (91.58%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCD+EKKEYLNCLK++GHKSE+CRHLSK+YL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDVEKKEYLNCLKSAGHKSEECRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFG-NLSQANLSGDKLEQ 95
          ECRMEKNLMAKQDM+ELGFG N+     S +K EQ
Sbjct: 61 ECRMEKNLMAKQDMSELGFGKNVDAGTKSEEKTEQ 95

The following BLAST results are available for this feature:
BLAST of Cucsa.359370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COX19_BOVIN3.8e-1545.12Cytochrome c oxidase assembly protein COX19 OS=Bos taurus GN=COX19 PE=3 SV=1[more]
COX19_HUMAN1.5e-1440.66Cytochrome c oxidase assembly protein COX19 OS=Homo sapiens GN=COX19 PE=1 SV=1[more]
COX19_USTMA9.4e-1452.38Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGS... [more]
COX19_SCHPO9.4e-1447.44Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyce... [more]
COX19_MAGOY1.2e-1342.39Cytochrome c oxidase assembly protein COX19 OS=Magnaporthe oryzae (strain Y34) G... [more]
BLAST of Cucsa.359370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0V0GNZ6_SOLCH1.6e-3983.16Putative cytochrome c oxidase assembly protein COX19-like OS=Solanum chacoense P... [more]
K4DFC6_SOLLC2.6e-3981.91Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
M1CIA6_SOLTU2.6e-3981.91Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026453 PE=4 SV=1[more]
M0ZRG9_SOLTU4.5e-3982.11Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402002538 PE=4 SV=1[more]
A0A0V0H7V2_SOLCH5.9e-3981.91Putative cytochrome c oxidase assembly protein COX19-like OS=Solanum chacoense P... [more]
BLAST of Cucsa.359370 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69750.11.7e-3772.53 cytochrome c oxidase 19-2[more]
AT1G66590.26.4e-3773.03 cytochrome c oxidase 19-1[more]
BLAST of Cucsa.359370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448014|ref|XP_004141761.1|6.9e-49100.00PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis sativus][more]
gi|659124474|ref|XP_008462179.1|1.3e-4796.84PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis melo][more]
gi|565387355|ref|XP_006359466.1|3.8e-3981.91PREDICTED: cytochrome c oxidase assembly protein COX19-like [Solanum tuberosum][more]
gi|460413979|ref|XP_004252352.1|3.8e-3981.91PREDICTED: cytochrome c oxidase assembly protein COX19-like isoform X1 [Solanum ... [more]
gi|971542843|ref|XP_015162263.1|6.5e-3982.11PREDICTED: cytochrome c oxidase assembly protein COX19-like isoform X2 [Solanum ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009069Cys_alpha_HP_mot_SF
IPR010625CHCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.359370.1Cucsa.359370.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009069Cysteine alpha-hairpin motif superfamilyunknownSSF47072Cysteine alpha-hairpin motifcoord: 27..63
score: 9.1
IPR010625CHCHPFAMPF06747CHCHcoord: 31..65
score: 8.
NoneNo IPR availablePANTHERPTHR21107FAMILY NOT NAMEDcoord: 1..81
score: 9.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.359370Cla015466Watermelon (97103) v1cgywmB647
Cucsa.359370Csa7G447130Cucumber (Chinese Long) v2cgycuB508
Cucsa.359370MELO3C024266Melon (DHL92) v3.5.1cgymeB579
Cucsa.359370ClCG09G001790Watermelon (Charleston Gray)cgywcgB610
Cucsa.359370CSPI07G21650Wild cucumber (PI 183967)cgycpiB535
Cucsa.359370CmaCh17G007840Cucurbita maxima (Rimu)cgycmaB0984
Cucsa.359370CmoCh17G007510Cucurbita moschata (Rifu)cgycmoB0986
Cucsa.359370Lsi02G028190Bottle gourd (USVL1VR-Ls)cgylsiB577
Cucsa.359370Cp4.1LG12g08450Cucurbita pepo (Zucchini)cgycpeB0936
Cucsa.359370MELO3C024266.2Melon (DHL92) v3.6.1cgymedB580
Cucsa.359370CsaV3_7G033550Cucumber (Chinese Long) v3cgycucB550
Cucsa.359370Cla97C09G163900Watermelon (97103) v2cgywmbB619
Cucsa.359370Bhi09G000154Wax gourdcgywgoB719
Cucsa.359370Carg09507Silver-seed gourdcarcgyB1148
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.359370Watermelon (97103) v2cgywmbB615
Cucsa.359370Watermelon (97103) v2cgywmbB617
Cucsa.359370Wax gourdcgywgoB718
Cucsa.359370Cucurbita maxima (Rimu)cgycmaB0986
Cucsa.359370Cucurbita maxima (Rimu)cgycmaB0987
Cucsa.359370Cucurbita moschata (Rifu)cgycmoB0979
Cucsa.359370Cucurbita moschata (Rifu)cgycmoB0988
Cucsa.359370Cucurbita moschata (Rifu)cgycmoB0989
Cucsa.359370Melon (DHL92) v3.5.1cgymeB581
Cucsa.359370Watermelon (Charleston Gray)cgywcgB615
Cucsa.359370Watermelon (97103) v1cgywmB651
Cucsa.359370Cucurbita pepo (Zucchini)cgycpeB0938
Cucsa.359370Bottle gourd (USVL1VR-Ls)cgylsiB581
Cucsa.359370Melon (DHL92) v3.6.1cgymedB582
Cucsa.359370Silver-seed gourdcarcgyB0147
Cucsa.359370Silver-seed gourdcarcgyB0162
Cucsa.359370Silver-seed gourdcarcgyB0839
Cucsa.359370Cucumber (Chinese Long) v3cgycucB548