CSPI07G21650 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G21650
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionCytochrome c oxidase assembly COX19
LocationChr7 : 18435937 .. 18438954 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCGTGATTTTCCCGGTCCGCTTCAGAGTTCAGACCCACTAGCGTATCACTTGCGCTGGTCATTCAAGCTAGTTTTCGACTTGGCGTTCCGTAGTATGGACGAATGAAATTTTCTGTTTCGAGCTATCGGGAGTTTCTACAATGAGTGCAGGTACTTTGCGAATCCCGAGGGCAAGAGTGATAGCATGATTTTTTTTTCCCCATTTTTTTGTGGGTGAATTTATGTTAGTTTCGAGGAAGGTAGGGATTTGAATGGTTGAGTGAGTTAAGGTTTTCGATTGTTGTAGGTAAATTTGTAAGGTCCGGATCAGGGATCCATTCTTTTATGAGCTCGTGTTTAGTGTTTTTCGGATACCTTGGAAAATAAATAGATCTGAATATAGCTGCATATGCTGGTGTTAGAGGGGCCTAGGAGAGGAGACTGTTTTATGGCTAGCTTCTGGTATTTTTCTTTTCTTTCAAATTTATATATATATTATATAAAGAGCATAGAGTCGAGTGGCTCTGAGCCCGGGTGTATACTAAATCTTTCGGTTATCCATAGTATTTATTCTTTCATTTTTGTGGTTATGATGGCGGTTAGTAGCCGTACACTGCACAGTATACACAACCGGTAGAAGTGGAATTGAGTTGTAAGACAATCAATGGCAATGTGATTTGGATTGTAAATTTGATGGCTTGTGTTTTCCCATAAATGAATCATGATGAACCATTCTCATACCAAGCATAGGTATTAGATGAAAATGTAGAGCTAGAATGCTTCGGTGGTGCCAAGCAAGATAACCATTTTGTTTCTAATATAAAATAATTTTTTGATTTACAAATTACAATTTTATGGACGTGCATAGAATGGATGTATATATTCCTTTTCGGCTACTTTGATTTGGTGAGAGCTATTGTGATCTTTATGCAGGTGGTTCGTTTGGAGGGAATAGAGGACTGAGACCAGTACCCCCAGAGAAAGGAGTTTTCCCTTTGGATCATATGCACCTCTGCGACTTGGTAGTTTTTTTTCTTTCTTTTTAAAGCATTATAGTCATTACTAGGATATACGATATTTGGGATATTTTTACAAGGTGTCTGTGTCCATTGCTTGTTTTATGATGAATGAACTTTATTGCAGGAGAAGAAAGAATACCTCAATTGTCTTAAAACCTCTGGTCACAAATCTGAAAAATGCAGACACTTATCGAAAAGATACCTTGAATGCCGTATGGAAAAGTAAGGTTTTTGACTTTTTTATATGTTCTTTGCTCTTCTCTAGATTCATGAACTTTTATTTCTGAGAACCCGGATTATTGATTATAATTGTATTGGTCATCCTTCATCCTTAAGTTTTACACACGACTCCTCTATAATGAGTCAATGAAAAACCCTTCCACCAAACTTCTAAGAAAAAGATAGTGCTAATATTGTGATGTAAGCTCAAGTTGCATTTTGCTTTATGTGGCTCGAACAAAAGAAAGTAGGTGCACGGTTAAGTATTTCTAAGCTTTTATTACGCCAAAAATAAATTATGCTAAAAGTCTCTAAATTAAGAAATAAGTTGGACCAACACAAACACAAAAATAGAAAAAAAAAAGTATAATAGCTACAATTTCCGCTTTTCAGAGCCGTGCATTTTCTACAGCTTCACCAGTCAGCTAACCAAATTTCTTGTAGAAAATGCAAACCTTCCCTTGCTTCTCTAGCGTAGCTACGGGCTAACTAATTCATATGCTCTAAAACTTAGAACGAACCTTTCCTTCCTTTTCTAACTAATTCTATGCTCTCCCTCAGTTTAAAACTCTGGCCCTTACATTCCCTCAGCCAGAGATTTCCTCTCCCAGGGTCAAACGGATTAGGGGATAGCAAATGCGTTTAGATTCAGTTGAAGTAAATATTACTATCCCTATCGATCCTATTCCTTTGGAGAGTTGGGATACGTTGGTCAAGTGAAAATGGGAAGGTAAATGGATATAGAGTTTTCGTCTCTTTTCCTCCTCTATTATGACAAGTAAGGAGGACACACATTGTGATACCGATATGAACACTGTCACCAAAATTATTTATTGAGCTACAATATTATGGTGTTGCACAGCGGGTTTTCATTCCTATCACCAAATGCCATGCAGATTGGTGGAAGTTTTTCTCTGGGCTGCTTATGCAGTTTCCTAAAACTGTTGTTTCTTATTACACTGCTTGTATGGGTATGGTTATTCACGACATTTCATTGGAACCATGCAGGAATTTAATGGCAAAGCAAGACATGACGGAACTGGGATTTGGAAATTTGAGCCAGGCCAATTTGTCTGGCGATAAATTGGAACAACTCTAAATTGTTCATCCTTATATAACCATAGTCGAAGATTTTAGTTAGTCACTGGGTCAAGTCATCATTAACCAACCCTTCTCATCCACATTTGAAGGAACGGTACAATAATTTTTCATAATGTATTGTCCTTGATCAAAATACTCATCTTGCAGGTTTTAGTTTCTTCTTTAAAGAACAATGTCTCATTCAACGGGCCAATACTATACTACACTTCCATTGTCTTCTCCCGTGTAGTTTCAAAAGCTTTCTTTTTATTCCATTACTTGTATGTATTCATGCAAATTTCTGAACAGTGCCATTTTTGACCTTGTGTAAGATCGCATGTGTAATGTCGATTTTTCAATCTTAAGAGAAACATTCAGCTACATCTGGCTCATTCCATGTACGAAATAGTGGCTTAAATTAGATGTAAATATTGATCTTCAAAAGAATGAATTAGCACTATTACAATTGAAACTAAATAATGTTTCCTCCCAACTGTCTACGACTCCATAGTGACATCATCAGATTCATCTACCATCATCTCATCTTTGAAAAGAAGTGTCAAGTAGGGAAGAACCTTAGGAAGTACCAATAGATCTGCCACATTAACACTCATCAAATCGAATGCAATGCAAGTCTTGTGCATGTGTTTCTCATCGACCACAGGAATTTTTGGGTATCTTTGGCTGAAATGCGTAAGGATGATTCTATACGCTCCCGC

mRNA sequence

ATGAGTGCAGGTGGTTCGTTTGGAGGGAATAGAGGACTGAGACCAGTACCCCCAGAGAAAGGAGTTTTCCCTTTGGATCATATGCACCTCTGCGACTTGGAGAAGAAAGAATACCTCAATTGTCTTAAAACCTCTGGTCACAAATCTGAAAAATGCAGACACTTATCGAAAAGATACCTTGAATGCCGTATGGAAAAGAATTTAATGGCAAAGCAAGACATGACGGAACTGGGATTTGGAAATTTGAGCCAGGCCAATTTGTCTGGCGATAAATTGGAACAACTCTAA

Coding sequence (CDS)

ATGAGTGCAGGTGGTTCGTTTGGAGGGAATAGAGGACTGAGACCAGTACCCCCAGAGAAAGGAGTTTTCCCTTTGGATCATATGCACCTCTGCGACTTGGAGAAGAAAGAATACCTCAATTGTCTTAAAACCTCTGGTCACAAATCTGAAAAATGCAGACACTTATCGAAAAGATACCTTGAATGCCGTATGGAAAAGAATTTAATGGCAAAGCAAGACATGACGGAACTGGGATTTGGAAATTTGAGCCAGGCCAATTTGTCTGGCGATAAATTGGAACAACTCTAA
Homology
[Close]
BLAST of CSPI07G21650 vs. Swiss-Prot
Match: COX19_BOVIN (Cytochrome c oxidase assembly protein COX19 OS=Bos taurus GN=COX19 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 6.5e-15
Identity = 37/82 (45.12%), Postives = 57/82 (69.51%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MS   +FG ++  +P PP+KG FPLDH   C   K++++ CL+ +  ++  CR+ SK YL
Sbjct: 1  MSTAMNFG-SKSFQPRPPDKGSFPLDHFGECKSFKEKFMKCLRDNNFENALCRNESKEYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNL 83
          ECRME+ LMA++ + +LGFG+L
Sbjct: 61 ECRMERQLMAQEPLEKLGFGDL 81

[Close]
BLAST of CSPI07G21650 vs. Swiss-Prot
Match: COX19_HUMAN (Cytochrome c oxidase assembly protein COX19 OS=Homo sapiens GN=COX19 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.5e-14
Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MS   +FG  +  +P PP+KG FPLDH+  C   K++++ CL  +  ++  CR  SK YL
Sbjct: 1  MSTAMNFG-TKSFQPRPPDKGSFPLDHLGECKSFKEKFMKCLHNNNFENALCRKESKEYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDK 92
          ECRME+ LM ++ + +LGFG+L+       K
Sbjct: 61 ECRMERKLMLQEPLEKLGFGDLTSGKSEAKK 90

[Close]
BLAST of CSPI07G21650 vs. Swiss-Prot
Match: COX19_USTMA (Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=COX19 PE=3 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-13
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 1 

Query: 17 PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYLECRMEKNLMAKQDMTE 76
          PPE+G FPLDH   C    +EY+NC+K + + + KCRHLS+ YL+CRM+K LM + +M  
Sbjct: 16 PPERGSFPLDHDGECKSVMQEYMNCIKYNRNDNGKCRHLSRAYLQCRMDKGLMEQDNMDN 75

Query: 77 LGF 80
          LGF
Sbjct: 76 LGF 78

[Close]
BLAST of CSPI07G21650 vs. Swiss-Prot
Match: COX19_SCHPO (Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cox19 PE=3 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-13
Identity = 37/78 (47.44%), Postives = 46/78 (58.97%), Query Frame = 1 

Query: 6  SFGGNRGLRPV----PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYLE 65
          SFG   G  P+    PPE+G FPLDH   C    K+YL C+K      E+CR L+K+YL+
Sbjct: 2  SFGAAGGSLPMTTREPPERGSFPLDHFGECTHVMKQYLECIKVKRENQEECRLLAKKYLQ 61

Query: 66 CRMEKNLMAKQDMTELGF 80
          CRM+  L  K DM  LGF
Sbjct: 62 CRMDTGLFGKDDMKNLGF 79

[Close]
BLAST of CSPI07G21650 vs. Swiss-Prot
Match: COX19_DICDI (Cytochrome c oxidase assembly protein COX19 OS=Dictyostelium discoideum GN=cox19 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-13
Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 1 

Query: 14 RPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYLECRMEKNLMAKQD 73
          +P PP+KG FPLDH   C      Y+NCL  +   S  C   SK YL+CRM+ NLMAK+D
Sbjct: 11 KPTPPDKGSFPLDHDSECSKPMLAYVNCLSENNGLSRFCMEFSKEYLKCRMDNNLMAKED 70

Query: 74 MTELGFGNLSQANL 88
          M   GF  + +A +
Sbjct: 71 MDNFGFEEVKKAKI 84

[Close]
BLAST of CSPI07G21650 vs. TrEMBL
Match: A0A0V0GNZ6_SOLCH (Putative cytochrome c oxidase assembly protein COX19-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 3.5e-39
Identity = 79/95 (83.16%), Postives = 87/95 (91.58%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK++GHKSE+CRHLS++YL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSAGHKSEECRHLSRKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFG-NLSQANLSGDKLEQ 95
          ECRMEKNLMAKQDM+ELGFG N+     S DK EQ
Sbjct: 61 ECRMEKNLMAKQDMSELGFGKNVDAGTKSEDKTEQ 95

[Close]
BLAST of CSPI07G21650 vs. TrEMBL
Match: K4DFC6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.9e-39
Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGHKS+ CRHLSK+YL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQ 95
           CRMEKNLMAKQDM+ELGFG    A  S +++EQ
Sbjct: 61 VCRMEKNLMAKQDMSELGFGKNYDAETSSEEMEQ 94

[Close]
BLAST of CSPI07G21650 vs. TrEMBL
Match: M1CIA6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026453 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.9e-39
Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGHKS+ CRHLSK+YL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQ 95
           CRMEKNLMAKQDM+ELGFG    A  S +++EQ
Sbjct: 61 VCRMEKNLMAKQDMSELGFGKNYDAETSSEEMEQ 94

[Close]
BLAST of CSPI07G21650 vs. TrEMBL
Match: M0ZRG9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402002538 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.0e-38
Identity = 78/95 (82.11%), Postives = 87/95 (91.58%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCD+EKKEYLNCLK++GHKSE+CRHLSK+YL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDVEKKEYLNCLKSAGHKSEECRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFG-NLSQANLSGDKLEQ 95
          ECRMEKNLMAKQDM+ELGFG N+     S +K EQ
Sbjct: 61 ECRMEKNLMAKQDMSELGFGKNVDAGTKSEEKTEQ 95

[Close]
BLAST of CSPI07G21650 vs. TrEMBL
Match: A0A0V0H7V2_SOLCH (Putative cytochrome c oxidase assembly protein COX19-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-38
Identity = 77/94 (81.91%), Postives = 84/94 (89.36%), Query Frame = 1 

Query: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
           MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGHKS+ CRHLSK+YL
Sbjct: 43  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 102

Query: 61  ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQ 95
            CRMEKNLMAKQDM+ELGFG    A  S ++ EQ
Sbjct: 103 VCRMEKNLMAKQDMSELGFGKNYDAETSSEETEQ 136

[Close]
BLAST of CSPI07G21650 vs. TAIR10
Match: AT1G69750.1 (AT1G69750.1 cytochrome c oxidase 19-2)

HSP 1 Score: 151.0 bits (380), Expect = 3.8e-37
Identity = 66/91 (72.53%), Postives = 78/91 (85.71%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S HKSE+CRHLSK+YL
Sbjct: 1  MSTGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDK 92
          +CRM KNLMAKQDM ELGF  + + + + DK
Sbjct: 61 QCRMAKNLMAKQDMAELGFSGVKELDSTEDK 91

[Close]
BLAST of CSPI07G21650 vs. TAIR10
Match: AT1G66590.2 (AT1G66590.2 cytochrome c oxidase 19-1)

HSP 1 Score: 148.7 bits (374), Expect = 1.9e-36
Identity = 65/89 (73.03%), Postives = 77/89 (86.52%), Query Frame = 1 

Query: 3   AGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYLEC 62
           AGG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S HKSE+CRHLSK+YL+C
Sbjct: 18  AGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYLQC 77

Query: 63  RMEKNLMAKQDMTELGFGNLSQANLSGDK 92
           RM KNLMAKQDM ELGF  + + + + DK
Sbjct: 78  RMAKNLMAKQDMAELGFSGVKELDSTEDK 106

[Close]
BLAST of CSPI07G21650 vs. NCBI nr
Match: gi|449448014|ref|XP_004141761.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis sativus])

HSP 1 Score: 200.3 bits (508), Expect = 1.5e-48
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQL 96
          ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQL
Sbjct: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQL 95

[Close]
BLAST of CSPI07G21650 vs. NCBI nr
Match: gi|659124474|ref|XP_008462179.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis melo])

HSP 1 Score: 196.1 bits (497), Expect = 2.9e-47
Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSK+YL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQL 96
          ECRMEKNLMAKQDMTELGFG++SQANLSGDKLEQL
Sbjct: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 95

[Close]
BLAST of CSPI07G21650 vs. NCBI nr
Match: gi|565387355|ref|XP_006359466.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like [Solanum tuberosum])

HSP 1 Score: 167.9 bits (424), Expect = 8.5e-39
Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGHKS+ CRHLSK+YL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQ 95
           CRMEKNLMAKQDM+ELGFG    A  S +++EQ
Sbjct: 61 VCRMEKNLMAKQDMSELGFGKNYDAETSSEEMEQ 94

[Close]
BLAST of CSPI07G21650 vs. NCBI nr
Match: gi|460413979|ref|XP_004252352.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like isoform X1 [Solanum lycopersicum])

HSP 1 Score: 167.9 bits (424), Expect = 8.5e-39
Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = 1 

Query: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
           MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGHKS+ CRHLSK+YL
Sbjct: 34  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 93

Query: 61  ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQ 95
            CRMEKNLMAKQDM+ELGFG    A  S +++EQ
Sbjct: 94  VCRMEKNLMAKQDMSELGFGKNYDAETSSEEMEQ 127

[Close]
BLAST of CSPI07G21650 vs. NCBI nr
Match: gi|971542843|ref|XP_015162263.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like isoform X2 [Solanum tuberosum])

HSP 1 Score: 167.2 bits (422), Expect = 1.4e-38
Identity = 78/95 (82.11%), Postives = 87/95 (91.58%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCD+EKKEYLNCLK++GHKSE+CRHLSK+YL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDVEKKEYLNCLKSAGHKSEECRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFG-NLSQANLSGDKLEQ 95
          ECRMEKNLMAKQDM+ELGFG N+     S +K EQ
Sbjct: 61 ECRMEKNLMAKQDMSELGFGKNVDAGTKSEEKTEQ 95

The following BLAST results are available for this feature:
BLAST of CSPI07G21650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COX19_BOVIN6.5e-1545.12Cytochrome c oxidase assembly protein COX19 OS=Bos taurus GN=COX19 PE=3 SV=1[more]
COX19_HUMAN2.5e-1440.66Cytochrome c oxidase assembly protein COX19 OS=Homo sapiens GN=COX19 PE=1 SV=1[more]
COX19_USTMA1.6e-1352.38Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGS... [more]
COX19_SCHPO1.6e-1347.44Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyce... [more]
COX19_DICDI2.1e-1345.95Cytochrome c oxidase assembly protein COX19 OS=Dictyostelium discoideum GN=cox19... [more]
BLAST of CSPI07G21650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0V0GNZ6_SOLCH3.5e-3983.16Putative cytochrome c oxidase assembly protein COX19-like OS=Solanum chacoense P... [more]
K4DFC6_SOLLC5.9e-3981.91Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
M1CIA6_SOLTU5.9e-3981.91Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026453 PE=4 SV=1[more]
M0ZRG9_SOLTU1.0e-3882.11Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402002538 PE=4 SV=1[more]
A0A0V0H7V2_SOLCH1.3e-3881.91Putative cytochrome c oxidase assembly protein COX19-like OS=Solanum chacoense P... [more]
BLAST of CSPI07G21650 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69750.13.8e-3772.53 cytochrome c oxidase 19-2[more]
AT1G66590.21.9e-3673.03 cytochrome c oxidase 19-1[more]
BLAST of CSPI07G21650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448014|ref|XP_004141761.1|1.5e-48100.00PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis sativus][more]
gi|659124474|ref|XP_008462179.1|2.9e-4796.84PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis melo][more]
gi|565387355|ref|XP_006359466.1|8.5e-3981.91PREDICTED: cytochrome c oxidase assembly protein COX19-like [Solanum tuberosum][more]
gi|460413979|ref|XP_004252352.1|8.5e-3981.91PREDICTED: cytochrome c oxidase assembly protein COX19-like isoform X1 [Solanum ... [more]
gi|971542843|ref|XP_015162263.1|1.4e-3882.11PREDICTED: cytochrome c oxidase assembly protein COX19-like isoform X2 [Solanum ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009069Cys_alpha_HP_mot_SF
IPR010625CHCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G21650.1CSPI07G21650.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009069Cysteine alpha-hairpin motif superfamilyunknownSSF47072Cysteine alpha-hairpin motifcoord: 27..63
score: 9.1
IPR010625CHCHPFAMPF06747CHCHcoord: 31..65
score: 8.
NoneNo IPR availablePANTHERPTHR21107FAMILY NOT NAMEDcoord: 1..81
score: 9.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G21650Cla015466Watermelon (97103) v1cpiwmB585
CSPI07G21650Csa7G447130Cucumber (Chinese Long) v2cpicuB354
CSPI07G21650MELO3C024266Melon (DHL92) v3.5.1cpimeB525
CSPI07G21650ClCG09G001790Watermelon (Charleston Gray)cpiwcgB553
CSPI07G21650Lsi02G028190Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G21650MELO3C024266.2Melon (DHL92) v3.6.1cpimedB512
CSPI07G21650CsaV3_7G033550Cucumber (Chinese Long) v3cpicucB414
CSPI07G21650Cla97C09G163900Watermelon (97103) v2cpiwmbB596
CSPI07G21650Bhi09G000154Wax gourdcpiwgoB702
CSPI07G21650Cucsa.359370Cucumber (Gy14) v1cgycpiB535
CSPI07G21650CmaCh17G007840Cucurbita maxima (Rimu)cmacpiB392
CSPI07G21650CmoCh17G007510Cucurbita moschata (Rifu)cmocpiB381
CSPI07G21650Cp4.1LG12g08450Cucurbita pepo (Zucchini)cpecpiB163
CSPI07G21650Carg09507Silver-seed gourdcarcpiB1064
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G21650Silver-seed gourdcarcpiB0135
CSPI07G21650Silver-seed gourdcarcpiB0146
CSPI07G21650Silver-seed gourdcarcpiB0780
CSPI07G21650Cucumber (Chinese Long) v3cpicucB399
CSPI07G21650Watermelon (97103) v2cpiwmbB571
CSPI07G21650Watermelon (97103) v2cpiwmbB575
CSPI07G21650Wax gourdcpiwgoB670
CSPI07G21650Cucurbita maxima (Rimu)cmacpiB501
CSPI07G21650Cucurbita maxima (Rimu)cmacpiB935
CSPI07G21650Cucurbita moschata (Rifu)cmocpiB074
CSPI07G21650Cucurbita moschata (Rifu)cmocpiB493
CSPI07G21650Cucurbita moschata (Rifu)cmocpiB914
CSPI07G21650Melon (DHL92) v3.5.1cpimeB560
CSPI07G21650Watermelon (Charleston Gray)cpiwcgB594
CSPI07G21650Watermelon (97103) v1cpiwmB605
CSPI07G21650Cucurbita pepo (Zucchini)cpecpiB346
CSPI07G21650Bottle gourd (USVL1VR-Ls)cpilsiB546
CSPI07G21650Melon (DHL92) v3.6.1cpimedB545
CSPI07G21650Cucumber (Gy14) v2cgybcpiB156
CSPI07G21650Cucumber (Gy14) v2cgybcpiB331