CSPI06G10000 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G10000
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Micronuclear linker histone polyprotein-like protein
Location	Chr6 : 8642075 .. 8643733 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCCAAAATCAGCGGTTTGAGCGCAGTTCCCATGCTTTCCTCTACCTTGCTAACTCCGCTTTCAGAGTAGTGGTTGCATGTTCTTTTTTACATGACAAGCAAAGAAATCTCCATTTTCAATGTATAAATTCATTTCCCATTTCTCCTTCTTCAATAAAATTCCCAAGCCCTCTATTACTCTTTCTTCTTCTTCTTCTCTTCTTCTTCTTGTAGATGGGTTCTGTTGGGAGCCTTCAGAGTAAAGCAAGCAGCAGCAGAGGAAGGTCTTATGCTCTGATGCTGCTTATTGCATTTGGGGCAGCCTTGCTAGGAGTTATGCTTCTTAACAAATTCAGAGAAAGGCGTATTTGCAACCTTCTTCTCAAACGCACAGATCAAGACCTCCGTTCCTTTCAACTCCTCTTTCAGGTCAACTCATTCATTATCCTTCTTCCATGCATTCCCTTGTCACTCGGTCTCACTTAATTGTATTCATTTCTGTTTTGAATGAACAGAAAGAGAAGGATCGAAGCAAGGAATTGGCGAAGAGCCACGAAGACATGACTGCAGCGCTGTATGTGCTCCGAACCAAGAAGATGGAGCTTGATAGGAGGCTACTGGAGTTGCAATCCACCATTGACTCACTCAGAGACGAGCAGAAAATCATAAGTGTTGCACTCCAAGAAAAGCAGAGTGAGATCAAAACTTTGAGGGAGAAAGAAATTGAATCTGGAAACGAAAATCCTCAAGTGGTTGCTTTAACGAAAAGCCTCAAGCAAAAGGAAGATGAGTTAGAGGAATTAAGACGTCGACTCGAGTCTCCTGCAGCTGTTGCGGCTAATGATTCATCAGATTCAGACCCACGTGGGGATTCAAAAACGTCTGAAGCACTAAGGGAGCAATTGCTTGAATCGAGCGGAGGAAGAGGAGAGAGTGAATCAATGGATAACAACAGAGGGGGGAGTAAATCGACAGGTTTTCATGAGATTGAAACTCAGAAGTTAGAGGATCATGAAGGAGTGGAGGAAAGGCAGAAGCAAGAGAAGTTGGGAGACGAGGGTGAAAATGCCATTGGGGGGGAACTTGAGGGCGAGGAGACTAAAATCACCAACGAACATAAGGAGAAAGAAGTCGGGCATTCTGAAGAAGTTGAAAATGGAAGAGCTAATAAGATTGCAAGGAGTGAAATTAAGATGAAAACAGAAACAGGCAAATATGGGAATACACGGAAGATCAGAGGAAAGAGATGGAGATACATAGCCAAAAGAAGGGCAGTGGACAATGGATGGAGACTGATATCGAAGAAATCGAAGAAGGATAGCAGAAACAGAAATTTGAACGACAATAGAGCCGTTGGCACAACACATGGGAAGTTCATTGATGGAGCAGAGGAGAAAATGAAAGAGGAGCACACACAGGGCGCAAAAGAAAATTTGATGGAAATGGAAAACAAAATGGTACAAGAAGAAAATTTGAATTCAGAAAATGACACATCGAGAGAGAAAAATGGGAATGGAGACGTGGAAGATGATAGCATTAAGCAAAACCCAGGTGAAGAGATGGAGCAAAATGACTCAAAAAGTGAAGAAAACCAAGAACCAGAACGAGGAATGGACTCCAAGGAAGATGGTAAAGAAGAAGAAGAAAACAAGGAAGAGCCAGAGGAGTCGGAGTTTTAA

mRNA sequence

ATGGGTTCTGTTGGGAGCCTTCAGAGTAAAGCAAGCAGCAGCAGAGGAAGGTCTTATGCTCTGATGCTGCTTATTGCATTTGGGGCAGCCTTGCTAGGAGTTATGCTTCTTAACAAATTCAGAGAAAGGCGTATTTGCAACCTTCTTCTCAAACGCACAGATCAAGACCTCCGTTCCTTTCAACTCCTCTTTCAGAAAGAGAAGGATCGAAGCAAGGAATTGGCGAAGAGCCACGAAGACATGACTGCAGCGCTGTATGTGCTCCGAACCAAGAAGATGGAGCTTGATAGGAGGCTACTGGAGTTGCAATCCACCATTGACTCACTCAGAGACGAGCAGAAAATCATAAGTGTTGCACTCCAAGAAAAGCAGAGTGAGATCAAAACTTTGAGGGAGAAAGAAATTGAATCTGGAAACGAAAATCCTCAAGTGGTTGCTTTAACGAAAAGCCTCAAGCAAAAGGAAGATGAGTTAGAGGAATTAAGACGTCGACTCGAGTCTCCTGCAGCTGTTGCGGCTAATGATTCATCAGATTCAGACCCACGTGGGGATTCAAAAACGTCTGAAGCACTAAGGGAGCAATTGCTTGAATCGAGCGGAGGAAGAGGAGAGAGTGAATCAATGGATAACAACAGAGGGGGGAGTAAATCGACAGGTTTTCATGAGATTGAAACTCAGAAGTTAGAGGATCATGAAGGAGTGGAGGAAAGGCAGAAGCAAGAGAAGTTGGGAGACGAGGGTGAAAATGCCATTGGGGGGGAACTTGAGGGCGAGGAGACTAAAATCACCAACGAACATAAGGAGAAAGAAGTCGGGCATTCTGAAGAAGTTGAAAATGGAAGAGCTAATAAGATTGCAAGGAGTGAAATTAAGATGAAAACAGAAACAGGCAAATATGGGAATACACGGAAGATCAGAGGAAAGAGATGGAGATACATAGCCAAAAGAAGGGCAGTGGACAATGGATGGAGACTGATATCGAAGAAATCGAAGAAGGATAGCAGAAACAGAAATTTGAACGACAATAGAGCCGTTGGCACAACACATGGGAAGTTCATTGATGGAGCAGAGGAGAAAATGAAAGAGGAGCACACACAGGGCGCAAAAGAAAATTTGATGGAAATGGAAAACAAAATGGTACAAGAAGAAAATTTGAATTCAGAAAATGACACATCGAGAGAGAAAAATGGGAATGGAGACGTGGAAGATGATAGCATTAAGCAAAACCCAGGTGAAGAGATGGAGCAAAATGACTCAAAAAGTGAAGAAAACCAAGAACCAGAACGAGGAATGGACTCCAAGGAAGATGGTAAAGAAGAAGAAGAAAACAAGGAAGAGCCAGAGGAGTCGGAGTTTTAA

Coding sequence (CDS)

ATGGGTTCTGTTGGGAGCCTTCAGAGTAAAGCAAGCAGCAGCAGAGGAAGGTCTTATGCTCTGATGCTGCTTATTGCATTTGGGGCAGCCTTGCTAGGAGTTATGCTTCTTAACAAATTCAGAGAAAGGCGTATTTGCAACCTTCTTCTCAAACGCACAGATCAAGACCTCCGTTCCTTTCAACTCCTCTTTCAGAAAGAGAAGGATCGAAGCAAGGAATTGGCGAAGAGCCACGAAGACATGACTGCAGCGCTGTATGTGCTCCGAACCAAGAAGATGGAGCTTGATAGGAGGCTACTGGAGTTGCAATCCACCATTGACTCACTCAGAGACGAGCAGAAAATCATAAGTGTTGCACTCCAAGAAAAGCAGAGTGAGATCAAAACTTTGAGGGAGAAAGAAATTGAATCTGGAAACGAAAATCCTCAAGTGGTTGCTTTAACGAAAAGCCTCAAGCAAAAGGAAGATGAGTTAGAGGAATTAAGACGTCGACTCGAGTCTCCTGCAGCTGTTGCGGCTAATGATTCATCAGATTCAGACCCACGTGGGGATTCAAAAACGTCTGAAGCACTAAGGGAGCAATTGCTTGAATCGAGCGGAGGAAGAGGAGAGAGTGAATCAATGGATAACAACAGAGGGGGGAGTAAATCGACAGGTTTTCATGAGATTGAAACTCAGAAGTTAGAGGATCATGAAGGAGTGGAGGAAAGGCAGAAGCAAGAGAAGTTGGGAGACGAGGGTGAAAATGCCATTGGGGGGGAACTTGAGGGCGAGGAGACTAAAATCACCAACGAACATAAGGAGAAAGAAGTCGGGCATTCTGAAGAAGTTGAAAATGGAAGAGCTAATAAGATTGCAAGGAGTGAAATTAAGATGAAAACAGAAACAGGCAAATATGGGAATACACGGAAGATCAGAGGAAAGAGATGGAGATACATAGCCAAAAGAAGGGCAGTGGACAATGGATGGAGACTGATATCGAAGAAATCGAAGAAGGATAGCAGAAACAGAAATTTGAACGACAATAGAGCCGTTGGCACAACACATGGGAAGTTCATTGATGGAGCAGAGGAGAAAATGAAAGAGGAGCACACACAGGGCGCAAAAGAAAATTTGATGGAAATGGAAAACAAAATGGTACAAGAAGAAAATTTGAATTCAGAAAATGACACATCGAGAGAGAAAAATGGGAATGGAGACGTGGAAGATGATAGCATTAAGCAAAACCCAGGTGAAGAGATGGAGCAAAATGACTCAAAAAGTGAAGAAAACCAAGAACCAGAACGAGGAATGGACTCCAAGGAAGATGGTAAAGAAGAAGAAGAAAACAAGGAAGAGCCAGAGGAGTCGGAGTTTTAA

Homology

[Close]

BLAST of CSPI06G10000 vs. TrEMBL
Match: A0A0A0KG17_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G124060 PE=4 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 2.8e-224
Identity = 446/452 (98.67%), Postives = 446/452 (98.67%), Query Frame = 1


Query: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60
           MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF
Sbjct: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60

Query: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKIISVAL 120
           QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKI SVAL
Sbjct: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAL 120

Query: 121 QEKQSEIKTLREKEIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD 180
           QEKQSEIKTLREKEIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD
Sbjct: 121 QEKQSEIKTLREKEIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD 180

Query: 181 PRGDSKTSEALREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEDHEGVEERQKQ 240
           PRGDSKTSE LREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLE HEGVEERQKQ
Sbjct: 181 PRGDSKTSETLREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEGHEGVEERQKQ 240

Query: 241 EKLGDEGENAIGGELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGKYG 300
           EKLGDEGENAIG ELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGKYG
Sbjct: 241 EKLGDEGENAIGRELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGKYG 300

Query: 301 NTRKIRGKRWRYIAKRRAVDNGWRLISKKSKKDSRNRNLNDNRAVGTTHGKFIDGAEEKM 360
           NTRKIRGKRWRYIAKRRAVDNGWRLISKKSKKDSRNRNLNDNRA GTTHGKFIDGAEEKM
Sbjct: 301 NTRKIRGKRWRYIAKRRAVDNGWRLISKKSKKDSRNRNLNDNRADGTTHGKFIDGAEEKM 360

Query: 361 KEEHTQGAKENLMEMENKMVQEENLNSENDTSREKNGNGDVEDDSIKQNPGEEMEQNDSK 420
           KEEHTQGAKENLMEMENKMVQ ENLNSENDTSREKNGNGDVEDDSIKQNPGEEMEQNDSK
Sbjct: 361 KEEHTQGAKENLMEMENKMVQ-ENLNSENDTSREKNGNGDVEDDSIKQNPGEEMEQNDSK 420

Query: 421 SEENQEPERGMDSKEDGKEEEENKEEPEESEF 453
           SEENQEPERGMDSKEDGKEEEENKEEPEESEF
Sbjct: 421 SEENQEPERGMDSKEDGKEEEENKEEPEESEF 451

[Close]

BLAST of CSPI06G10000 vs. TrEMBL
Match: A0A061E2Z9_THECC (Micronuclear linker histone polyprotein-like protein OS=Theobroma cacao GN=TCM_007962 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.0e-36
Identity = 128/304 (42.11%), Postives = 183/304 (60.20%), Query Frame = 1


Query: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60
           MG V S +   +S+RGR Y LMLL+AFGAALLGVM+L+K RERRI NLL++  ++ L S 
Sbjct: 3   MGGV-SHKGNGNSNRGRPYGLMLLVAFGAALLGVMVLHKLRERRIFNLLVEDKNRQLISL 62

Query: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKIISVAL 120
           QLL QKE++  KE+ ++ E+  A +Y LR +KMELDRRLLE+QS I+SL+DEQK +  AL
Sbjct: 63  QLLLQKEREYMKEMKRNAEETKAKIYFLRNQKMELDRRLLEMQSAIESLKDEQKTMESAL 122

Query: 121 QEKQSEIKTLREKEIESGNENPQVVALTKSLKQKEDELEELRRRLESPA---AVAANDSS 180
           +EKQ EI  L+EK ++SGNENPQV+ALT +LKQKE E+E L+ RL+SP    +V+A+D S
Sbjct: 123 EEKQYEIILLQEKHVDSGNENPQVLALTATLKQKEAEIEVLKHRLKSPVRVWSVSADDKS 182

Query: 181 D--SDPRGDSKTSEALREQLLESSGGR-GESESMDNNRGGSKSTGFHEIETQKLEDHEGV 240
           +   +        E  + +  +  GGR  ES +  +    +K     EI++   ++ +  
Sbjct: 183 NLPVNITVTGSMEEKEKTEFSQEEGGRVHESTAYKDGDNSTKDQDRSEIKSNFSQEEQNR 242

Query: 241 EERQKQEKLGDEGENAIGGELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKT 299
           EE +   K   +GE  +  ++ G          +K V   E   N  A    R+E    T
Sbjct: 243 EEVEDGSK--KKGETTLRMDMAG------GGQLQKPVSLGENARNEGAAGEMRNEYSQYT 297

[Close]

BLAST of CSPI06G10000 vs. TrEMBL
Match: W9R083_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022179 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.6e-33
Identity = 157/439 (35.76%), Postives = 243/439 (55.35%), Query Frame = 1


Query: 4   VGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSFQLL 63
           +G+  S   SSRGRSY LMLL+AFGAALLGVM+L+K RERRI NLL+K  D  L S  LL
Sbjct: 11  LGNGSSNGGSSRGRSYGLMLLLAFGAALLGVMILHKLRERRIFNLLIKEKDGQLFSLHLL 70

Query: 64  FQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKIISVALQEK 123
            QKE+D  KE+   +E+M A +Y LRTKKMELDRRLLE+QSTIDSL+DEQ+ + +A++EK
Sbjct: 71  LQKERDYMKEVKSKNEEMKAKIYSLRTKKMELDRRLLEMQSTIDSLKDEQRTMEIAIEEK 130

Query: 124 QSEIKTLR-EKEIESGNENPQVVALTKSLKQKEDELEELRRRLESPA-AVAANDSSDSDP 183
           Q+EIK LR + +I +  EN QV AL +SLKQKE E+E+L+R L++P  A + N++++++ 
Sbjct: 131 QNEIKMLRAQDQISNEKENNQVAALVESLKQKEAEIEDLKRCLQNPENAGSVNNTAETEQ 190

Query: 184 RGDSKTSEALREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEDHEGVEERQKQE 243
           +G S + +    +++E  G   + E  + N+ G +S      E   +E     +E  K E
Sbjct: 191 KGKSGSEDNGERRIIE-EGETAKLEDENGNKVGDQSVKDGVTENPTIEG----QEHDKNE 250

Query: 244 KLGDEGENAIGGELEGEETKITNEHKEKEVGHSEEVE---NGRANKIARSEIKMKTETGK 303
              DE   ++   +    T   + +   +V   EE++   +G+  K  +S+ + +   G 
Sbjct: 251 DSKDENV-SLSLNIVANSTGAISRNMVGKVMDGEELKVEGDGQLGKHEKSQDEGEENPGS 310

Query: 304 YGNTRKIRGK-RWRYIAKRRAVDNG-----WRLISK-----KSKKDSRNRNLNDNRAVGT 363
                K+  +  +    KR +V +      WR I+K     KS K SR       R    
Sbjct: 311 VEGGMKLEIRDGFEKNGKRGSVSDNVKGKRWRKIAKSRRLEKSGKLSRVTRRRSVRFYKD 370

Query: 364 THGKFIDGAEEKMKEEHTQGAKENLMEMENKMVQ--EENLNS-ENDTSREKNGNGDVEDD 423
            HG      + ++K   T+G    L+  +N+ ++  + +++S E     E + NGDV++ 
Sbjct: 371 EHGDL----KSRVKNAATKGGV--LLGEDNRQLEGRKSDVSSFEMPKKGEVSINGDVKES 430

[Close]

BLAST of CSPI06G10000 vs. TrEMBL
Match: V7AGA6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G112100g PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.5e-31
Identity = 141/417 (33.81%), Postives = 211/417 (50.60%), Query Frame = 1


Query: 5   GSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSFQLLF 64
           G   S   S RGR YAL+ LI FGAALLGVM+L+K RERRI  LL+K  D  + + QLLF
Sbjct: 6   GVHSSSGGSHRGRPYALIWLITFGAALLGVMVLHKLRERRIYTLLVKEKDHQILALQLLF 65

Query: 65  QKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKIISVALQEKQ 124
           QKEKDRSKEL   +E+M   +Y LR++KMEL R ++E+QST+DSL+DEQK++  A +E+Q
Sbjct: 66  QKEKDRSKELRGKNEEMKGKIYGLRSQKMELSRTVVEMQSTLDSLKDEQKLMETAFEEQQ 125

Query: 125 SEIKTLREKEIESGNENPQVVALTKSLKQKEDELEELRRRLES---------PAAVAAN- 184
           +E++ ++EK  +    + Q+VAL +++K KE E+E+L+RRLES         P  VAAN 
Sbjct: 126 NELRLMQEKVGDVDQGSSQIVALRENVKHKEAEIEDLKRRLESSVNGHPITFPQIVAANG 185

Query: 185 ------------DSSDSDPRGDSKTSEALREQLLESSGGRGESESMDNNRGGSKSTGFHE 244
                       DSS+S         +A++ +L +S  G   +E  D            E
Sbjct: 186 TMQAQNESEKEEDSSESAKHEGDDNDDAIKSELTKSKDGGVATEIKD------------E 245

Query: 245 IETQKLEDHEGVEERQKQEKLGDEGENAIGGELEGEETKITNEHKEKEVGHSEEVENGRA 304
           I T      EG   +  ++   D G  A    ++  E     E K     H+ EVE    
Sbjct: 246 IWT------EGEIGKANEDPQNDGGGAA--KYIDDAEVGYGREKKAVREEHAGEVE---- 305

Query: 305 NKIARSEIKMKT---ETGKYGNTRKIRGKRWRYIAKRRAVDNGWRLISKKSKKDSRNRNL 364
            KIA    ++K       K+G+ R+ +GKRWR                      + N +L
Sbjct: 306 -KIADGGGQVKQLAWMKRKHGHERRAKGKRWR---------------------STVNSSL 365

Query: 365 NDNRAVGTTHGKFIDGAEEKMKEEHTQGAKENLMEMENKMVQEENLNSENDTSREKN 397
            +N  V   H         K+ ++  +G++   +  E    +E+   ++N T ++K+
Sbjct: 366 MENNVVSDNH-----MGNRKVYKDEAKGSRVGKVYNEENFAREDERRNKNSTRKDKS 371

[Close]

BLAST of CSPI06G10000 vs. TrEMBL
Match: K7KY66_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G297400 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 6.2e-30
Identity = 143/430 (33.26%), Postives = 226/430 (52.56%), Query Frame = 1


Query: 5   GSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSFQLLF 64
           G   S   S RGR Y L+LLI FG ALLGVM+L+K RERRIC LL+K  DQ + + QLL 
Sbjct: 6   GVHSSSGGSHRGRPYVLVLLITFGIALLGVMVLHKLRERRICTLLVKEKDQQILALQLLL 65

Query: 65  QKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKIISVALQEKQ 124
           QKE+DRSKEL   +E+M   LY LR++KMEL R + E+QST+DSL+DEQK++  A +E+Q
Sbjct: 66  QKERDRSKELRSKNEEMKGKLYTLRSQKMELARTVGEMQSTLDSLKDEQKLMESAFEEQQ 125

Query: 125 SEIKTLREKEIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSDPRGD 184
           +E+++++EK          + AL  +LK KE+ELE+L+RRLE+P  V  + +  ++    
Sbjct: 126 NELRSMQEKGKSVAQGGYDIEALRDNLKHKEEELEDLKRRLETP--VNDHPTIFNEIVTA 185

Query: 185 SKTSEALREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEDHEGVEERQKQEKLG 244
           + T  A  E   + + G       DNN G SKS      E  K +D E   E   ++ + 
Sbjct: 186 NGTIAAQDEIEKDENSGESAKHEGDNNEGASKS------ELTKFKDGEVATE--MRDGIR 245

Query: 245 DEGENAIGGELEGEETKITNEHKEKEVGHSEEVEN-----GRANKIARSEIKMKTETGKY 304
            +G+ A   +++  E     E K     H+ +VEN     GR  ++A ++        K+
Sbjct: 246 TDGDGAT-KDMDDAEVVDGREKKAMREEHAGQVENNTDGGGRVKQLAGTK-------RKH 305

Query: 305 GNTRKIRGKRWRYIAKRRAVDNGWRLISKKSKKDSRNRNLNDNRAVGTTHGKFIDGAEEK 364
               +++GKRWR   K  +++N     +   +  S NR +  +   G   GK  +     
Sbjct: 306 SRASRMKGKRWRTTVKNSSMEN-----NGVFENHSDNRKVYKDELKGRRVGKVSNEENFA 365

Query: 365 MKEEHTQGAKENLMEMENKMVQEENLNSENDTSREKNGNGDVEDDSIKQN-PGEEMEQND 424
            ++E      +   +   K+++ EN  S+ D +  K  N   +  +   N   +++    
Sbjct: 366 REDEGRNNNSQRKEKPHAKLLKTENHESKEDANDMKVNNTKHQVTNSGSNIYSQKILDEI 412

Query: 425 SKSEENQEPE 429
            +SEEN++ +
Sbjct: 426 RQSEENEQSQ 412

[Close]

BLAST of CSPI06G10000 vs. NCBI nr
Match: gi|778712727|ref|XP_011656925.1| (PREDICTED: paralemmin-3-like [Cucumis sativus])

HSP 1 Score: 785.8 bits (2028), Expect = 4.0e-224
Identity = 446/452 (98.67%), Postives = 446/452 (98.67%), Query Frame = 1


Query: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60
           MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF
Sbjct: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60

Query: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKIISVAL 120
           QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKI SVAL
Sbjct: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAL 120

Query: 121 QEKQSEIKTLREKEIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD 180
           QEKQSEIKTLREKEIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD
Sbjct: 121 QEKQSEIKTLREKEIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD 180

Query: 181 PRGDSKTSEALREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEDHEGVEERQKQ 240
           PRGDSKTSE LREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLE HEGVEERQKQ
Sbjct: 181 PRGDSKTSETLREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEGHEGVEERQKQ 240

Query: 241 EKLGDEGENAIGGELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGKYG 300
           EKLGDEGENAIG ELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGKYG
Sbjct: 241 EKLGDEGENAIGRELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGKYG 300

Query: 301 NTRKIRGKRWRYIAKRRAVDNGWRLISKKSKKDSRNRNLNDNRAVGTTHGKFIDGAEEKM 360
           NTRKIRGKRWRYIAKRRAVDNGWRLISKKSKKDSRNRNLNDNRA GTTHGKFIDGAEEKM
Sbjct: 301 NTRKIRGKRWRYIAKRRAVDNGWRLISKKSKKDSRNRNLNDNRADGTTHGKFIDGAEEKM 360

Query: 361 KEEHTQGAKENLMEMENKMVQEENLNSENDTSREKNGNGDVEDDSIKQNPGEEMEQNDSK 420
           KEEHTQGAKENLMEMENKMVQ ENLNSENDTSREKNGNGDVEDDSIKQNPGEEMEQNDSK
Sbjct: 361 KEEHTQGAKENLMEMENKMVQ-ENLNSENDTSREKNGNGDVEDDSIKQNPGEEMEQNDSK 420

Query: 421 SEENQEPERGMDSKEDGKEEEENKEEPEESEF 453
           SEENQEPERGMDSKEDGKEEEENKEEPEESEF
Sbjct: 421 SEENQEPERGMDSKEDGKEEEENKEEPEESEF 451

[Close]

BLAST of CSPI06G10000 vs. NCBI nr
Match: gi|659094716|ref|XP_008448207.1| (PREDICTED: glutamic acid-rich protein-like [Cucumis melo])

HSP 1 Score: 666.4 bits (1718), Expect = 3.6e-188
Identity = 394/455 (86.59%), Postives = 414/455 (90.99%), Query Frame = 1


Query: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60
           MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLL+KFRERRICNLLLKRTDQDLRSF
Sbjct: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLHKFRERRICNLLLKRTDQDLRSF 60

Query: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKIISVAL 120
           QLLFQKE DRSKELAKS EDMTAALY+LR++KMELDRRLLELQSTIDSLRDEQKI SVAL
Sbjct: 61  QLLFQKETDRSKELAKSLEDMTAALYLLRSQKMELDRRLLELQSTIDSLRDEQKITSVAL 120

Query: 121 QEKQSEIKTLREKEIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD 180
           QEKQ EIK LREKEI+SGN+NPQVVALT+SLKQKEDELEELRRR +SP A+AANDS  SD
Sbjct: 121 QEKQREIKALREKEIDSGNDNPQVVALTQSLKQKEDELEELRRRHKSPGAIAANDS--SD 180

Query: 181 PRGDSKTSEALREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLED-HEGVEERQK 240
           PRGDS  SE  R+QLLES  G+GESESMDNNRGGS STGFHEIETQKLE+ HEG EERQK
Sbjct: 181 PRGDSTMSEEKRDQLLESGNGKGESESMDNNRGGSTSTGFHEIETQKLEETHEGEEERQK 240

Query: 241 QEKLGDEGENAIGGELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGKY 300
           QEKLGDEGENA G E+EG ETKITNEHKEKE G  EEVENGRANKIARSEI+MKTETGKY
Sbjct: 241 QEKLGDEGENANGREVEG-ETKITNEHKEKEGGDFEEVENGRANKIARSEIRMKTETGKY 300

Query: 301 GNTRKIRGKRWRYIAKRRAVDNGWRLISKKSKKDS-RNRNLNDNRAVGTTHGKFIDGAEE 360
           GNTRKIRGKRWRYI KRRAVDNGWRLISKK KK++  NRNLND RA+GTTHGKF DGAEE
Sbjct: 301 GNTRKIRGKRWRYIVKRRAVDNGWRLISKKMKKENGNNRNLNDIRAIGTTHGKFTDGAEE 360

Query: 361 KMKEEHTQGAKENLMEMENKMVQEENLNSEN-DTSREKNGNGDVEDDSIKQNPGEEMEQN 420
           KMKEE TQ AKENLME ENKMVQEENLNSEN DTSREKNGNGDV DD IK+NPGEEME N
Sbjct: 361 KMKEERTQEAKENLMEKENKMVQEENLNSENDDTSREKNGNGDVGDDRIKKNPGEEMEPN 420

Query: 421 DSKSEENQEPERGMDSKEDGKEEEENKEEPEESEF 453
           D KS+E +EPERG D KEDGKEEEENKEEPEESEF
Sbjct: 421 DLKSKEKEEPERGTDFKEDGKEEEENKEEPEESEF 452

[Close]

BLAST of CSPI06G10000 vs. NCBI nr
Match: gi|590690405|ref|XP_007043499.1| (Micronuclear linker histone polyprotein-like protein [Theobroma cacao])

HSP 1 Score: 161.8 bits (408), Expect = 2.9e-36
Identity = 128/304 (42.11%), Postives = 183/304 (60.20%), Query Frame = 1


Query: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60
           MG V S +   +S+RGR Y LMLL+AFGAALLGVM+L+K RERRI NLL++  ++ L S 
Sbjct: 3   MGGV-SHKGNGNSNRGRPYGLMLLVAFGAALLGVMVLHKLRERRIFNLLVEDKNRQLISL 62

Query: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKIISVAL 120
           QLL QKE++  KE+ ++ E+  A +Y LR +KMELDRRLLE+QS I+SL+DEQK +  AL
Sbjct: 63  QLLLQKEREYMKEMKRNAEETKAKIYFLRNQKMELDRRLLEMQSAIESLKDEQKTMESAL 122

Query: 121 QEKQSEIKTLREKEIESGNENPQVVALTKSLKQKEDELEELRRRLESPA---AVAANDSS 180
           +EKQ EI  L+EK ++SGNENPQV+ALT +LKQKE E+E L+ RL+SP    +V+A+D S
Sbjct: 123 EEKQYEIILLQEKHVDSGNENPQVLALTATLKQKEAEIEVLKHRLKSPVRVWSVSADDKS 182

Query: 181 D--SDPRGDSKTSEALREQLLESSGGR-GESESMDNNRGGSKSTGFHEIETQKLEDHEGV 240
           +   +        E  + +  +  GGR  ES +  +    +K     EI++   ++ +  
Sbjct: 183 NLPVNITVTGSMEEKEKTEFSQEEGGRVHESTAYKDGDNSTKDQDRSEIKSNFSQEEQNR 242

Query: 241 EERQKQEKLGDEGENAIGGELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKT 299
           EE +   K   +GE  +  ++ G          +K V   E   N  A    R+E    T
Sbjct: 243 EEVEDGSK--KKGETTLRMDMAG------GGQLQKPVSLGENARNEGAAGEMRNEYSQYT 297

[Close]

BLAST of CSPI06G10000 vs. NCBI nr
Match: gi|743893215|ref|XP_011039889.1| (PREDICTED: uncharacterized protein LOC105136297 [Populus euphratica])

HSP 1 Score: 157.5 bits (397), Expect = 5.4e-35
Identity = 88/155 (56.77%), Postives = 119/155 (76.77%), Query Frame = 1


Query: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60
           M + G+ +   + +RGR Y LMLL+AFGAALLGVM+L+KFRERRI NLL+K  D++L S 
Sbjct: 1   MAAGGAHKGNGNGNRGRPYGLMLLLAFGAALLGVMVLHKFRERRIFNLLVKEKDRELMSL 60

Query: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKIISVAL 120
           QL+ QKE++RSKE+ +  E+M   +Y LRT+KMELDRR LELQSTIDS++DEQKI+  AL
Sbjct: 61  QLILQKERERSKEMKRKAEEMKGKIYSLRTQKMELDRRQLELQSTIDSIKDEQKIMESAL 120

Query: 121 QEKQSEIKTLREKEIESGNENPQVVALTKSLKQKE 156
           +EK++EIK LRE  I++   N Q+  L +SLK+ +
Sbjct: 121 EEKRNEIKMLREMNIDADKGNLQLADLIESLKKSK 155

[Close]

BLAST of CSPI06G10000 vs. NCBI nr
Match: gi|1009127565|ref|XP_015880761.1| (PREDICTED: uncharacterized protein LOC107416748 [Ziziphus jujuba])

HSP 1 Score: 153.3 bits (386), Expect = 1.0e-33
Identity = 114/278 (41.01%), Postives = 169/278 (60.79%), Query Frame = 1


Query: 14  SRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSFQLLFQKEKDRSKE 73
           SRGR Y +MLL+AFGAALLGVM+L+K RERRI NLLLK  D +L S  LL QKE+DR +E
Sbjct: 20  SRGRPYGVMLLLAFGAALLGVMILHKLRERRIFNLLLKDRDNELISIHLLLQKERDRVQE 79

Query: 74  LAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKIISVALQEKQSEIKTLREK 133
           + + +EDM A +Y LR +KME+DRRL+E+QSTIDSL+DEQ+ + VA++EKQ+EIK LR K
Sbjct: 80  VNRKNEDMKANIYTLRNQKMEVDRRLIEMQSTIDSLKDEQRTMEVAIEEKQNEIKMLRLK 139

Query: 134 E-IESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSDPRGDSKTSEALR 193
           E   +  EN QV  L ++LKQK+ E+E+L++RL++P  +    SSD DP   S     + 
Sbjct: 140 ESATTETENTQVTELIETLKQKDAEIEDLKKRLQNPVKM----SSDDDPSNPSVNLTTVT 199

Query: 194 EQLL-ESSGGRGESESMDNNRGGSKSTGFHEIETQKLEDHEGVEERQKQEKLGDEGENAI 253
              + +     G+ + +  ++    S      + Q++E    + E+Q Q K  ++ ++  
Sbjct: 200 GNTVGKEKTAEGDGKIIVTDQKSKNS------QDQRIEYGTSMGEKQGQGKKSEDFKDD- 259

Query: 254 GGELEGEETKITNEHKEKEVGHSEEVENGRANKIARSE 290
                 EE  I       + G  +  ENG   ++  ++
Sbjct: 260 ----GSEENNIAASETISDGGGKDIEENGELGRLENAQ 282

The following BLAST results are available for this feature:

BLAST of CSPI06G10000 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI06G10000 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG17_CUCSA	2.8e-224	98.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G124060 PE=4 SV=1	[more]
A0A061E2Z9_THECC	2.0e-36	42.11	Micronuclear linker histone polyprotein-like protein OS=Theobroma cacao GN=TCM_0...	[more]
W9R083_9ROSA	4.6e-33	35.76	Uncharacterized protein OS=Morus notabilis GN=L484_022179 PE=4 SV=1	[more]
V7AGA6_PHAVU	1.5e-31	33.81	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G112100g PE=4 SV=1	[more]
K7KY66_SOYBN	6.2e-30	33.26	Uncharacterized protein OS=Glycine max GN=GLYMA_06G297400 PE=4 SV=1	[more]

BLAST of CSPI06G10000 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI06G10000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778712727\|ref\|XP_011656925.1\|	4.0e-224	98.67	PREDICTED: paralemmin-3-like [Cucumis sativus]	[more]
gi\|659094716\|ref\|XP_008448207.1\|	3.6e-188	86.59	PREDICTED: glutamic acid-rich protein-like [Cucumis melo]	[more]
gi\|590690405\|ref\|XP_007043499.1\|	2.9e-36	42.11	Micronuclear linker histone polyprotein-like protein [Theobroma cacao]	[more]
gi\|743893215\|ref\|XP_011039889.1\|	5.4e-35	56.77	PREDICTED: uncharacterized protein LOC105136297 [Populus euphratica]	[more]
gi\|1009127565\|ref\|XP_015880761.1\|	1.0e-33	41.01	PREDICTED: uncharacterized protein LOC107416748 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G10000.1	CSPI06G10000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 365..385 score: -coord: 144..164 score: -coord: 92..112 scor
None	No IPR available	PANTHER	PTHR36143	FAMILY NOT NAMED	coord: 1..451 score: 1.7
None	No IPR available	PANTHER	PTHR36143:SF2	SUBFAMILY NOT NAMED	coord: 1..451 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G10000	Cla013588	Watermelon (97103) v1	cpiwmB538
CSPI06G10000	Csa6G124060	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G10000	MELO3C013526	Melon (DHL92) v3.5.1	cpimeB442
CSPI06G10000	ClCG02G017390	Watermelon (Charleston Gray)	cpiwcgB467
CSPI06G10000	Lsi10G008680	Bottle gourd (USVL1VR-Ls)	cpilsiB411
CSPI06G10000	MELO3C013526.2	Melon (DHL92) v3.6.1	cpimedB440
CSPI06G10000	CsaV3_6G012500	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G10000	Cla97C02G043080	Watermelon (97103) v2	cpiwmbB459
CSPI06G10000	Bhi10G000896	Wax gourd	cpiwgoB617
CSPI06G10000	CmaCh02G001250	Cucurbita maxima (Rimu)	cmacpiB641
CSPI06G10000	CmoCh02G001240	Cucurbita moschata (Rifu)	cmocpiB633
CSPI06G10000	Cp4.1LG05g14790	Cucurbita pepo (Zucchini)	cpecpiB750
CSPI06G10000	CsGy6G010130	Cucumber (Gy14) v2	cgybcpiB288
CSPI06G10000	Carg13567	Silver-seed gourd	carcpiB0028

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G10000	Watermelon (97103) v2	cpiwmbB455
CSPI06G10000	Wax gourd	cpiwgoB605
CSPI06G10000	Wax gourd	cpiwgoB624
CSPI06G10000	Cucumber (Gy14) v1	cgycpiB156
CSPI06G10000	Cucurbita moschata (Rifu)	cmocpiB561
CSPI06G10000	Melon (DHL92) v3.5.1	cpimeB419
CSPI06G10000	Watermelon (Charleston Gray)	cpiwcgB477
CSPI06G10000	Cucurbita pepo (Zucchini)	cpecpiB289
CSPI06G10000	Bottle gourd (USVL1VR-Ls)	cpilsiB425
CSPI06G10000	Bottle gourd (USVL1VR-Ls)	cpilsiB426
CSPI06G10000	Melon (DHL92) v3.6.1	cpimedB414
CSPI06G10000	Silver-seed gourd	carcpiB0372