CsaV3_6G012500 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G012500
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionMicronuclear linker histone polyprotein-like protein
Locationchr6 : 8604583 .. 8606124 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATTTTCAATGTATAAATTCATTTCCCATTTCTCCTTCTTCAATAAAATTCCCAAGCCCTCTATTACTCTTTCTTCTTCTTCTCTTCTTCTTCTTGCAGATGGGTTCTGTTGGGAGCCTTCAGAGTAAAGCAAGCAGCAGCAGAGGAAGGTCTTATGCTCTGATGCTGCTTATTGCATTTGGGGCAGCCTTGCTAGGAGTTATGCTTCTTAACAAATTCAGAGAAAGGCGTATTTGCAACCTTCTTCTCAAACGCACAGATCAAGACCTCCGTTCCTTTCAACTCCTCTTTCAGGTCAACTCATTCATTATCCTTCTTCCATGCATTCCCTTGTCACTCGGTCTCACTTAATTGTATTCATTTCTGTTTTGAATGAACAGAAAGAGAAGGATCGAAGCAAGGAATTGGCGAAGAGCCACGAAGACATGACTGCAGCGCTGTATGTGCTCCGAACCAAGAAGATGGAGCTTGATAGGAGGCTACTGGAGTTGCAATCCACCATTGACTCACTCAGAGACGAGCAGAAAATCACAAGTGTTGCACTCCAAGAAAAGCAGAGTGAGATCAAAACTTTGAGGGAGAAAGAAATTGAATCTGGAAACGAAAATCCTCAAGTGGTTGCTTTAACGAAAAGCCTCAAGCAAAAGGAAGATGAGTTAGAGGAATTGAGACGTCGACTCGAGTCTCCTGCAGCTGTTGCGGCTAATGATTCATCAGATTCAGACCCACGTGGGGATTCAAAAACGTCTGAAACACTAAGGGAGCAATTGCTTGAATCGAGCGGAGGAAGAGGAGAGAGTGAATCAATGGATAACAACAGAGGGGGGAGTAAATCGACAGGTTTTCATGAGATTGAAACTCAGAAGTTAGAGGGTCATGAAGGAGTGGAGGAAAGGCAGAAGCAAGAGAAGTTGGGAGACGAGGGTGAAAATGCCATTGGGAGGGAACTTGAGGGCGAGGAGACTAAAATCACCAACGAACATAAGGAGAAAGAAGTCGGGCATTCTGAAGAAGTTGAAAATGGAAGAGCTAATAAGATTGCAAGGAGTGAAATTAAGATGAAAACAGAAACAGGCAAATATGGGAATACACGGAAGATCAGAGGAAAGAGATGGAGATACATAGCCAAAAGAAGGGCAGTGGACAATGGATGGAGACTGATATCGAAGAAATCGAAGAAGGATAGCAGAAACAGAAATTTGAACGACAATAGAGCCGATGGCACAACACATGGGAAGTTCATTGATGGAGCAGAGGAGAAAATGAAAGAGGAGCACACACAGGGCGCAAAAGAAAATTTGATGGAAATGGAAAACAAAATGGTACAAGAAAATTTGAATTCAGAAAATGACACATCCAGAGAGAAAAATGGGAATGGAGACGTGGAAGATGATAGCATTAAGCAAAACCCAGGTGAAGAGATGGAGCAAAATGACTCAAAAAGTGAAGAAAACCAAGAACCAGAACGAGGAATGGACTCCAAGGAAGATGGTAAAGAAGAAGAAGAAAACAAGGAAGAGCCAGAGGAGTCAGAGTTTTAA

mRNA sequence

ATGGGTTCTGTTGGGAGCCTTCAGAGTAAAGCAAGCAGCAGCAGAGGAAGGTCTTATGCTCTGATGCTGCTTATTGCATTTGGGGCAGCCTTGCTAGGAGTTATGCTTCTTAACAAATTCAGAGAAAGGCGTATTTGCAACCTTCTTCTCAAACGCACAGATCAAGACCTCCGTTCCTTTCAACTCCTCTTTCAGAAAGAGAAGGATCGAAGCAAGGAATTGGCGAAGAGCCACGAAGACATGACTGCAGCGCTGTATGTGCTCCGAACCAAGAAGATGGAGCTTGATAGGAGGCTACTGGAGTTGCAATCCACCATTGACTCACTCAGAGACGAGCAGAAAATCACAAGTGTTGCACTCCAAGAAAAGCAGAGTGAGATCAAAACTTTGAGGGAGAAAGAAATTGAATCTGGAAACGAAAATCCTCAAGTGGTTGCTTTAACGAAAAGCCTCAAGCAAAAGGAAGATGAGTTAGAGGAATTGAGACGTCGACTCGAGTCTCCTGCAGCTGTTGCGGCTAATGATTCATCAGATTCAGACCCACGTGGGGATTCAAAAACGTCTGAAACACTAAGGGAGCAATTGCTTGAATCGAGCGGAGGAAGAGGAGAGAGTGAATCAATGGATAACAACAGAGGGGGGAGTAAATCGACAGGTTTTCATGAGATTGAAACTCAGAAGTTAGAGGGTCATGAAGGAGTGGAGGAAAGGCAGAAGCAAGAGAAGTTGGGAGACGAGGGTGAAAATGCCATTGGGAGGGAACTTGAGGGCGAGGAGACTAAAATCACCAACGAACATAAGGAGAAAGAAGTCGGGCATTCTGAAGAAGTTGAAAATGGAAGAGCTAATAAGATTGCAAGGAGTGAAATTAAGATGAAAACAGAAACAGGCAAATATGGGAATACACGGAAGATCAGAGGAAAGAGATGGAGATACATAGCCAAAAGAAGGGCAGTGGACAATGGATGGAGACTGATATCGAAGAAATCGAAGAAGGATAGCAGAAACAGAAATTTGAACGACAATAGAGCCGATGGCACAACACATGGGAAGTTCATTGATGGAGCAGAGGAGAAAATGAAAGAGGAGCACACACAGGGCGCAAAAGAAAATTTGATGGAAATGGAAAACAAAATGGTACAAGAAAATTTGAATTCAGAAAATGACACATCCAGAGAGAAAAATGGGAATGGAGACGTGGAAGATGATAGCATTAAGCAAAACCCAGGTGAAGAGATGGAGCAAAATGACTCAAAAAGTGAAGAAAACCAAGAACCAGAACGAGGAATGGACTCCAAGGAAGATGGTAAAGAAGAAGAAGAAAACAAGGAAGAGCCAGAGGAGTCAGAGTTTTAA

Coding sequence (CDS)

ATGGGTTCTGTTGGGAGCCTTCAGAGTAAAGCAAGCAGCAGCAGAGGAAGGTCTTATGCTCTGATGCTGCTTATTGCATTTGGGGCAGCCTTGCTAGGAGTTATGCTTCTTAACAAATTCAGAGAAAGGCGTATTTGCAACCTTCTTCTCAAACGCACAGATCAAGACCTCCGTTCCTTTCAACTCCTCTTTCAGAAAGAGAAGGATCGAAGCAAGGAATTGGCGAAGAGCCACGAAGACATGACTGCAGCGCTGTATGTGCTCCGAACCAAGAAGATGGAGCTTGATAGGAGGCTACTGGAGTTGCAATCCACCATTGACTCACTCAGAGACGAGCAGAAAATCACAAGTGTTGCACTCCAAGAAAAGCAGAGTGAGATCAAAACTTTGAGGGAGAAAGAAATTGAATCTGGAAACGAAAATCCTCAAGTGGTTGCTTTAACGAAAAGCCTCAAGCAAAAGGAAGATGAGTTAGAGGAATTGAGACGTCGACTCGAGTCTCCTGCAGCTGTTGCGGCTAATGATTCATCAGATTCAGACCCACGTGGGGATTCAAAAACGTCTGAAACACTAAGGGAGCAATTGCTTGAATCGAGCGGAGGAAGAGGAGAGAGTGAATCAATGGATAACAACAGAGGGGGGAGTAAATCGACAGGTTTTCATGAGATTGAAACTCAGAAGTTAGAGGGTCATGAAGGAGTGGAGGAAAGGCAGAAGCAAGAGAAGTTGGGAGACGAGGGTGAAAATGCCATTGGGAGGGAACTTGAGGGCGAGGAGACTAAAATCACCAACGAACATAAGGAGAAAGAAGTCGGGCATTCTGAAGAAGTTGAAAATGGAAGAGCTAATAAGATTGCAAGGAGTGAAATTAAGATGAAAACAGAAACAGGCAAATATGGGAATACACGGAAGATCAGAGGAAAGAGATGGAGATACATAGCCAAAAGAAGGGCAGTGGACAATGGATGGAGACTGATATCGAAGAAATCGAAGAAGGATAGCAGAAACAGAAATTTGAACGACAATAGAGCCGATGGCACAACACATGGGAAGTTCATTGATGGAGCAGAGGAGAAAATGAAAGAGGAGCACACACAGGGCGCAAAAGAAAATTTGATGGAAATGGAAAACAAAATGGTACAAGAAAATTTGAATTCAGAAAATGACACATCCAGAGAGAAAAATGGGAATGGAGACGTGGAAGATGATAGCATTAAGCAAAACCCAGGTGAAGAGATGGAGCAAAATGACTCAAAAAGTGAAGAAAACCAAGAACCAGAACGAGGAATGGACTCCAAGGAAGATGGTAAAGAAGAAGAAGAAAACAAGGAAGAGCCAGAGGAGTCAGAGTTTTAA

Protein sequence

MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSFQLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVALQEKQSEIKTLREKEIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSDPRGDSKTSETLREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEGHEGVEERQKQEKLGDEGENAIGRELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGKYGNTRKIRGKRWRYIAKRRAVDNGWRLISKKSKKDSRNRNLNDNRADGTTHGKFIDGAEEKMKEEHTQGAKENLMEMENKMVQENLNSENDTSREKNGNGDVEDDSIKQNPGEEMEQNDSKSEENQEPERGMDSKEDGKEEEENKEEPEESEF
Homology
[Close]
BLAST of CsaV3_6G012500 vs. NCBI nr
Match: XP_011656925.1 (PREDICTED: paralemmin-3-like [Cucumis sativus] >KGN46691.1 hypothetical protein Csa_6G124060 [Cucumis sativus])

HSP 1 Score: 603.6 bits (1555), Expect = 5.5e-169
Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0 

Query: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60
           MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF
Sbjct: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60

Query: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAX 120
           QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAX
Sbjct: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAX 120

Query: 121 XXXXXXXXXXXXXXIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD 180
           XXXXXXXXXXXXXXIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD
Sbjct: 121 XXXXXXXXXXXXXXIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD 180

Query: 181 PRGDSKTSETLREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEGHEGVEERQKQ 240
           PRGDSKTSETLREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEGHEGVEERQKQ
Sbjct: 181 PRGDSKTSETLREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEGHEGVEERQKQ 240

Query: 241 EKLGDEGENAIGRELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGKYG 300
           EKLGDEGENAIGRELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGKYG
Sbjct: 241 EKLGDEGENAIGRELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGKYG 300

Query: 301 NTRKIRGKRWRYIAKRRAVXXXXXXXXXXXXXXSRNRNLNDNRADGTTHGKFIDGAEEKM 360
           NTRKIRGKRWRYIAKRRAVXXXXXXXXXXXXXXSRNRNLNDNRADGTTHGKFIDGAEEKM
Sbjct: 301 NTRKIRGKRWRYIAKRRAVXXXXXXXXXXXXXXSRNRNLNDNRADGTTHGKFIDGAEEKM 360

Query: 361 KEEHT 366
           KEEHT
Sbjct: 361 KEEHT 365

[Close]
BLAST of CsaV3_6G012500 vs. NCBI nr
Match: XP_022970680.1 (golgin subfamily A member 6-like protein 22 [Cucurbita maxima])

HSP 1 Score: 268.5 bits (685), Expect = 4.2e-68
Identity = 190/309 (61.49%), Postives = 219/309 (70.87%), Query Frame = 0 

Query: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60
           MG V  + SK S+SRGR YALMLLIAFGAALLGVMLL+KFRERRICNLLLKRTD+DL SF
Sbjct: 1   MGVVAGVHSKLSNSRGRPYALMLLIAFGAALLGVMLLHKFRERRICNLLLKRTDEDLHSF 60

Query: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAX 120
           QLLFQKE+DRSKEL K++ED+  ++++LRT+KMELDRRLLELQSTIDSLRDEQKI  +AX
Sbjct: 61  QLLFQKERDRSKELEKNNEDIKESMFLLRTQKMELDRRLLELQSTIDSLRDEQKIIRIAX 120

Query: 121 XXXXXXXXXXXXXXIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD 180
           XXXXXXXXXXXX   E+GNEN QVV LT+ LKQKEDELE+LRRRLES  AVAAND   SD
Sbjct: 121 XXXXXXXXXXXXKETENGNENSQVVVLTQRLKQKEDELEDLRRRLESREAVAAND--PSD 180

Query: 181 PRGDSKTSETLREQLLESSGGRGESESMDNNRGGSK------STGFHEIETQKLEGHEGV 240
           P  DS  +E   E LL         ESM NNRG SK      ST                
Sbjct: 181 PHEDSTKTEEQSEILL---------ESMKNNRGESKPDFSKGSTSKRXXXXXXXXXXXXX 240

Query: 241 EERQKQEKLGDEGENAIGRELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKT 300
                    G + +  +  E +GEE+KITN+HK +E   SE +EN RA+KI    +KMKT
Sbjct: 241 XXXXXXXXEGAKVQKQVSSEDDGEESKITNDHKGEEGIDSEAIENQRADKILNDGMKMKT 298

Query: 301 ETGKYGNTR 304
           ETGKYG+TR
Sbjct: 301 ETGKYGHTR 298

[Close]
BLAST of CsaV3_6G012500 vs. NCBI nr
Match: XP_022947452.1 (golgin subfamily A member 6-like protein 22 [Cucurbita moschata])

HSP 1 Score: 267.7 bits (683), Expect = 7.2e-68
Identity = 191/310 (61.61%), Postives = 221/310 (71.29%), Query Frame = 0 

Query: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60
           MG V  + SK S+SRGR YALMLL+AFGAALLGVMLL+KFRERRICNLLLKRTD+DL SF
Sbjct: 1   MGVVAGVHSKLSNSRGRPYALMLLVAFGAALLGVMLLHKFRERRICNLLLKRTDEDLHSF 60

Query: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAX 120
           QLLFQKE+DRSKEL K++ED+  ++++LRT+KMELDRRLLELQSTIDSLRDEQKI  +AX
Sbjct: 61  QLLFQKERDRSKELEKNNEDIKESMFLLRTQKMELDRRLLELQSTIDSLRDEQKIIRIAX 120

Query: 121 XXXXXXXXXXXXXXIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD 180
           XXXXXXXXXXXXX  E+GNEN QVV LT+ LKQKEDELE+LRRRL+S  AVAAND   SD
Sbjct: 121 XXXXXXXXXXXXXETENGNENSQVVVLTQRLKQKEDELEDLRRRLKSRGAVAAND--PSD 180

Query: 181 PRGDSKTSETLREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQK-------LEGHEG 240
           P  DS   E   E LL         ESM NNRG SK   F E  T K             
Sbjct: 181 PHEDSIKIEEQSEILL---------ESMKNNRGESK-PDFSEGSTSKRXXXXXXXXXXXX 240

Query: 241 VEERQKQEKLGDEGENAIGRELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMK 300
                     G + +  +  E +GEE+KITN+HK +E   SE +EN RA+KI    +KMK
Sbjct: 241 XXXXXXXXXXGAKVQKQVSSEDDGEESKITNDHKGEEGNDSEAIENQRADKILNDGMKMK 298

Query: 301 TETGKYGNTR 304
           TETGKYG+TR
Sbjct: 301 TETGKYGHTR 298

[Close]
BLAST of CsaV3_6G012500 vs. NCBI nr
Match: XP_023532871.1 (golgin subfamily A member 6-like protein 22 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.2 bits (622), Expect = 8.5e-61
Identity = 181/309 (58.58%), Postives = 206/309 (66.67%), Query Frame = 0 

Query: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60
           MG V  + SK S+SRGR YALMLLIAFGAALLGVMLL+KFRERRICNLLLKRTD+DL SF
Sbjct: 1   MGVVAGVHSKLSNSRGRPYALMLLIAFGAALLGVMLLHKFRERRICNLLLKRTDEDLHSF 60

Query: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAX 120
           QLLFQKE+DRSKEL K++ED+  ++++LRT+KMELDRRLLELQSTID            X
Sbjct: 61  QLLFQKERDRSKELEKNNEDIKESMFLLRTQKMELDRRLLELQSTIDXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD 180
           XXXXXXXXXXXXX  E+GNEN QVV LT+ LKQKEDELE+LRRRLES  AVAAND   SD
Sbjct: 121 XXXXXXXXXXXXXETENGNENSQVVVLTQRLKQKEDELEDLRRRLESRGAVAAND--PSD 180

Query: 181 PRGDSKTSETLREQLLESSGGRGESESMDNNRGGSK------STGFHEIETQKLEGHEGV 240
           P  DS  +E   E LL         ESM NNRG SK      ST                
Sbjct: 181 PHEDSTKTEEQSEILL---------ESMKNNRGESKPDFSEESTSXXXXXXXXXXXXXXX 240

Query: 241 EERQKQEKLGDEGENAIGRELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKT 300
                              E +GEE+KITN+HK +E   SE +EN RA+KI    +KMKT
Sbjct: 241 XXXXXXXXXXXXXXXXXSSEDDGEESKITNDHKGEEGHDSEAIENQRADKILNDGMKMKT 298

Query: 301 ETGKYGNTR 304
           ETGKYG+TR
Sbjct: 301 ETGKYGHTR 298

[Close]
BLAST of CsaV3_6G012500 vs. NCBI nr
Match: XP_010095823.1 (uncharacterized protein DDB_G0290685 [Morus notabilis] >EXB62291.1 hypothetical protein L484_022179 [Morus notabilis])

HSP 1 Score: 155.6 bits (392), Expect = 4.0e-34
Identity = 129/319 (40.44%), Postives = 181/319 (56.74%), Query Frame = 0 

Query: 18  SYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSFQLLFQKEKDRSKELAKS 77
           SY LMLL+AFGAALLGVM+L+K RERRI NLL+K  D  L S  LL QKE+D  KE+   
Sbjct: 25  SYGLMLLLAFGAALLGVMILHKLRERRIFNLLIKEKDGQLFSLHLLLQKERDYMKEVKSK 84

Query: 78  HEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVA-XXXXXXXXXXXXXXXIE 137
           +E+M A +Y LRTKKMELDRRLL  QSTIDSL+DEQ+   +A                I 
Sbjct: 85  NEEMKAKIYSLRTKKMELDRRLLXXQSTIDSLKDEQRTMEIAIEEKQNEIKMLRAQDQIS 144

Query: 138 SGNENPQVVALTKSLKQKEDELEELRRRLESPA-AVAANDSSDSDPRGDSKTSETLREQL 197
           +  EN QV AL +SLKQKE E+E+L+R L++P  A + N++++++ +G S + +    ++
Sbjct: 145 NEKENNQVAALVESLKQKEAEIEDLKRCLQNPENAGSVNNTAETEQKGKSGSEDNGERRI 204

Query: 198 LESSGGRGESESMDNNRGGSKSTGFHEIETQKLEGHE-GVEERQKQEKL----------- 257
           +E  G   + E  + N+ G +S      E   +EG E    E  K E +           
Sbjct: 205 IE-EGETAKLEDENGNKVGDQSVKDGVTENPTIEGQEHDKNEDSKDENVSLSLNIVANST 264

Query: 258 GDEGENAIGRELEGEETKITNEHK--EKEVGHSEEVEN-GRANKIARSEIKMKTE-TGKY 317
           G    N +G+ ++GEE K+  + +  + E    E  EN G      + EI+   E  GK 
Sbjct: 265 GAISRNMVGKVMDGEELKVEGDGQLGKHEKSQDEGEENPGSVEGGMKLEIRDGFEKNGKR 324

[Close]
BLAST of CsaV3_6G012500 vs. TrEMBL
Match: tr|A0A0A0KG17|A0A0A0KG17_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124060 PE=4 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 3.7e-169
Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0 

Query: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60
           MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF
Sbjct: 1   MGSVGSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSF 60

Query: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAX 120
           QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAX
Sbjct: 61  QLLFQKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAX 120

Query: 121 XXXXXXXXXXXXXXIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD 180
           XXXXXXXXXXXXXXIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD
Sbjct: 121 XXXXXXXXXXXXXXIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSD 180

Query: 181 PRGDSKTSETLREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEGHEGVEERQKQ 240
           PRGDSKTSETLREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEGHEGVEERQKQ
Sbjct: 181 PRGDSKTSETLREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEGHEGVEERQKQ 240

Query: 241 EKLGDEGENAIGRELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGKYG 300
           EKLGDEGENAIGRELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGKYG
Sbjct: 241 EKLGDEGENAIGRELEGEETKITNEHKEKEVGHSEEVENGRANKIARSEIKMKTETGKYG 300

Query: 301 NTRKIRGKRWRYIAKRRAVXXXXXXXXXXXXXXSRNRNLNDNRADGTTHGKFIDGAEEKM 360
           NTRKIRGKRWRYIAKRRAVXXXXXXXXXXXXXXSRNRNLNDNRADGTTHGKFIDGAEEKM
Sbjct: 301 NTRKIRGKRWRYIAKRRAVXXXXXXXXXXXXXXSRNRNLNDNRADGTTHGKFIDGAEEKM 360

Query: 361 KEEHT 366
           KEEHT
Sbjct: 361 KEEHT 365

[Close]
BLAST of CsaV3_6G012500 vs. TrEMBL
Match: tr|W9R083|W9R083_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022179 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.6e-34
Identity = 129/319 (40.44%), Postives = 181/319 (56.74%), Query Frame = 0 

Query: 18  SYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSFQLLFQKEKDRSKELAKS 77
           SY LMLL+AFGAALLGVM+L+K RERRI NLL+K  D  L S  LL QKE+D  KE+   
Sbjct: 25  SYGLMLLLAFGAALLGVMILHKLRERRIFNLLIKEKDGQLFSLHLLLQKERDYMKEVKSK 84

Query: 78  HEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVA-XXXXXXXXXXXXXXXIE 137
           +E+M A +Y LRTKKMELDRRLL  QSTIDSL+DEQ+   +A                I 
Sbjct: 85  NEEMKAKIYSLRTKKMELDRRLLXXQSTIDSLKDEQRTMEIAIEEKQNEIKMLRAQDQIS 144

Query: 138 SGNENPQVVALTKSLKQKEDELEELRRRLESPA-AVAANDSSDSDPRGDSKTSETLREQL 197
           +  EN QV AL +SLKQKE E+E+L+R L++P  A + N++++++ +G S + +    ++
Sbjct: 145 NEKENNQVAALVESLKQKEAEIEDLKRCLQNPENAGSVNNTAETEQKGKSGSEDNGERRI 204

Query: 198 LESSGGRGESESMDNNRGGSKSTGFHEIETQKLEGHE-GVEERQKQEKL----------- 257
           +E  G   + E  + N+ G +S      E   +EG E    E  K E +           
Sbjct: 205 IE-EGETAKLEDENGNKVGDQSVKDGVTENPTIEGQEHDKNEDSKDENVSLSLNIVANST 264

Query: 258 GDEGENAIGRELEGEETKITNEHK--EKEVGHSEEVEN-GRANKIARSEIKMKTE-TGKY 317
           G    N +G+ ++GEE K+  + +  + E    E  EN G      + EI+   E  GK 
Sbjct: 265 GAISRNMVGKVMDGEELKVEGDGQLGKHEKSQDEGEENPGSVEGGMKLEIRDGFEKNGKR 324

[Close]
BLAST of CsaV3_6G012500 vs. TrEMBL
Match: tr|A0A0L9V5G2|A0A0L9V5G2_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g111700 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.9e-30
Identity = 127/368 (34.51%), Postives = 184/368 (50.00%), Query Frame = 0 

Query: 5   GSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSFQLLF 64
           G   S   S RGR Y L+LLI FGAALLGVM+L+K RERRI  LL+K  D  + + QLL 
Sbjct: 7   GVHSSSGGSHRGRPYVLILLIIFGAALLGVMVLHKLRERRIYTLLVKEKDHQILALQLLL 66

Query: 65  QKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAXXXXX 124
           QKE+DRSKEL + +E++   +Y LR++KMEL R ++E+QST+DSL+DEQK+   A     
Sbjct: 67  QKERDRSKELREKNEEIKGKIYALRSQKMELSRTVVEMQSTLDSLKDEQKLMETAFEEQQ 126

Query: 125 XXXXXXXXXXIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSDPRGD 184
                      + G    ++VAL ++LK KE E+E+L+RRLESP     ND   + P  +
Sbjct: 127 NELRLMQEKVGKVGQGGSEIVALRENLKHKEAEIEDLKRRLESP----VNDHPTTFP--E 186

Query: 185 SKTSETLREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEGHEGVEERQKQE--K 244
           + T+    +   ES      SES+ +  G ++     E+   K     GV    K E   
Sbjct: 187 TVTANGTNQAQDESEKEEDTSESVKHGGGDNEDASKSELTESK---DRGVATEMKDEIWT 246

Query: 245 LGDEGENAIGRELEGEETKITNEHKEKEVGHSE----EVENGRANKIARSEIKMKTETG- 304
            G+ G+     + +G+     N+  E   G  +    E  +G+   I  S  ++K   G 
Sbjct: 247 DGEIGKANKNSQSDGDGVVKYNDDAEVVYGREKKTMSEEHSGQVEDITDSGGQVKQLAGM 306

Query: 305 --KYGNTRKIRGKRWRYIAKRRAVXXXXXXXXXXXXXXSRNRNLNDNRADGTTHGKFIDG 364
             K+G+ R+ +GKRWR I     +                NR +  + A G   GK  D 
Sbjct: 307 KRKHGHARRTKGKRWRTIVNSSLMENNVVSDNIG------NRKVYKDEAKGRRVGKVYDE 359

[Close]
BLAST of CsaV3_6G012500 vs. TrEMBL
Match: tr|A0A0S3SBL6|A0A0S3SBL6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G138100 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.9e-30
Identity = 127/368 (34.51%), Postives = 184/368 (50.00%), Query Frame = 0 

Query: 5   GSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSFQLLF 64
           G   S   S RGR Y L+LLI FGAALLGVM+L+K RERRI  LL+K  D  + + QLL 
Sbjct: 7   GVHSSSGGSHRGRPYVLILLIIFGAALLGVMVLHKLRERRIYTLLVKEKDHQILALQLLL 66

Query: 65  QKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAXXXXX 124
           QKE+DRSKEL + +E++   +Y LR++KMEL R ++E+QST+DSL+DEQK+   A     
Sbjct: 67  QKERDRSKELREKNEEIKGKIYALRSQKMELSRTVVEMQSTLDSLKDEQKLMETAFEEQQ 126

Query: 125 XXXXXXXXXXIESGNENPQVVALTKSLKQKEDELEELRRRLESPAAVAANDSSDSDPRGD 184
                      + G    ++VAL ++LK KE E+E+L+RRLESP     ND   + P  +
Sbjct: 127 NELRLMQEKVGKVGQGGSEIVALRENLKHKEAEIEDLKRRLESP----VNDHPTTFP--E 186

Query: 185 SKTSETLREQLLESSGGRGESESMDNNRGGSKSTGFHEIETQKLEGHEGVEERQKQE--K 244
           + T+    +   ES      SES+ +  G ++     E+   K     GV    K E   
Sbjct: 187 TVTANGTNQAQDESEKEEDTSESVKHGGGDNEDASKSELTESK---DRGVATEMKDEIWT 246

Query: 245 LGDEGENAIGRELEGEETKITNEHKEKEVGHSE----EVENGRANKIARSEIKMKTETG- 304
            G+ G+     + +G+     N+  E   G  +    E  +G+   I  S  ++K   G 
Sbjct: 247 DGEIGKANKNSQSDGDGVVKYNDDAEVVYGREKKTMSEEHSGQVEDITDSGGQVKQLAGM 306

Query: 305 --KYGNTRKIRGKRWRYIAKRRAVXXXXXXXXXXXXXXSRNRNLNDNRADGTTHGKFIDG 364
             K+G+ R+ +GKRWR I     +                NR +  + A G   GK  D 
Sbjct: 307 KRKHGHARRTKGKRWRTIVNSSLMENNVVSDNIG------NRKVYKDEAKGRRVGKVYDE 359

[Close]
BLAST of CsaV3_6G012500 vs. TrEMBL
Match: tr|V7AGA6|V7AGA6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G112100g PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.4e-29
Identity = 122/335 (36.42%), Postives = 168/335 (50.15%), Query Frame = 0 

Query: 5   GSLQSKASSSRGRSYALMLLIAFGAALLGVMLLNKFRERRICNLLLKRTDQDLRSFQLLF 64
           G   S   S RGR YAL+ LI FGAALLGVM+L+K RERRI  LL+K  D  + + QLLF
Sbjct: 6   GVHSSSGGSHRGRPYALIWLITFGAALLGVMVLHKLRERRIYTLLVKEKDHQILALQLLF 65

Query: 65  QKEKDRSKELAKSHEDMTAALYVLRTKKMELDRRLLELQSTIDSLRDEQKITSVAXXXXX 124
           QKEKDRSKEL   +E+M   +Y LR++KMEL R ++E+QST+DSL+DEQK+   A     
Sbjct: 66  QKEKDRSKELRGKNEEMKGKIYGLRSQKMELSRTVVEMQSTLDSLKDEQKLMETAFEEQQ 125

Query: 125 XXXXXXXXXXIESGNENPQVVALTKSLKQKEDELEELRRRLES---------PAAVAAN- 184
                      +    + Q+VAL +++K KE E+E+L+RRLES         P  VAAN 
Sbjct: 126 NELRLMQEKVGDVDQGSSQIVALRENVKHKEAEIEDLKRRLESSVNGHPITFPQIVAANG 185

Query: 185 ------------DSSDSDPRGDSKTSETLREQLLESSGGRGESESMDNNRGGSKSTGFHE 244
                       DSS+S         + ++ +L +S  G   +E  D            E
Sbjct: 186 TMQAQNESEKEEDSSESAKHEGDDNDDAIKSELTKSKDGGVATEIKD------------E 245

Query: 245 IETQKLEGHEGVEERQKQEKLG------DEGENAIGRELEGEETKITNEHKEKEVGHSEE 304
           I T   EG  G      Q   G      D+ E   GRE +          +E+  G  E+
Sbjct: 246 IWT---EGEIGKANEDPQNDGGGAAKYIDDAEVGYGREKKAV--------REEHAGEVEK 305

Query: 305 VENGRANKIARSEIKMKTETGKYGNTRKIRGKRWR 312
           + +G       + +K      K+G+ R+ +GKRWR
Sbjct: 306 IADGGGQVKQLAWMKR-----KHGHERRAKGKRWR 312

The following BLAST results are available for this feature:
BLAST of CsaV3_6G012500 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656925.15.5e-169100.00PREDICTED: paralemmin-3-like [Cucumis sativus] >KGN46691.1 hypothetical protein ... [more]
XP_022970680.14.2e-6861.49golgin subfamily A member 6-like protein 22 [Cucurbita maxima][more]
XP_022947452.17.2e-6861.61golgin subfamily A member 6-like protein 22 [Cucurbita moschata][more]
XP_023532871.18.5e-6158.58golgin subfamily A member 6-like protein 22 [Cucurbita pepo subsp. pepo][more]
XP_010095823.14.0e-3440.44uncharacterized protein DDB_G0290685 [Morus notabilis] >EXB62291.1 hypothetical ... [more]
BLAST of CsaV3_6G012500 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G012500 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G012500 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KG17|A0A0A0KG17_CUCSA3.7e-169100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124060 PE=4 SV=1[more]
tr|W9R083|W9R083_9ROSA2.6e-3440.44Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022179 PE=4 SV=1[more]
tr|A0A0L9V5G2|A0A0L9V5G2_PHAAN3.9e-3034.51Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g111700 PE... [more]
tr|A0A0S3SBL6|A0A0S3SBL6_PHAAN3.9e-3034.51Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G... [more]
tr|V7AGA6|V7AGA6_PHAVU4.4e-2936.42Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G112100g PE=4 ... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G012500.1CsaV3_6G012500.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..164
NoneNo IPR availableCOILSCoilCoilcoord: 92..112
NoneNo IPR availableCOILSCoilCoilcoord: 365..385
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 387..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..371
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..451
NoneNo IPR availablePANTHERPTHR36143FAMILY NOT NAMEDcoord: 8..279