CSPI06G03080 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCATTATCAAAATCTGAAAAGAAGAAAAAGAAGAAAAAGAAGAAAAGAAAAGAAAAGAAAAGGCATCAAACTTGGATCCACTCTCCACACCACACGCCCTTCTTCTTCTTCCTCTACTTTGTCCATTCTGACCTTACCAAGCCGAGCGACTCACTGAGTCACACTTTTCATTGCATTTCCGGGGACTCGGAGTCCCTCGGAGAATCCTTCCTCTGTCGCTCCTCTCTATCCTCTTCAACCGCTTCTTTTCTTCACTTGCCCTCTTCAATTCTTCCTTCCTCTTCCCACTCCATGGCCACCTCCGTCATTCAGGTTTTCTTTTTTCTCTTTTCTCTTTTCTCTTTTTCTCTTTTTCTCCCTTTCTTTCTTCCCTTCATTCTCTTCCCATTTAATTTCATGTTTCTTTCTTCATTTCCTTTCATAGGGTTTTACCAAGTCCCTTGCCATGACTGTGCTCTCCGAGATCGGCGATAAAACATTCTTCGCCGCTGCGGTTAGTCCCTACTTCTGCTCGATTTCTGTTTTCTTCTTTTCTTCCATTAATTTGTTTCTACTGTCTTCTAGTGTAAGCAATGCGTTTTCATCCCGAAGTTGACTTTTGTGGTTCTTAAAGTTTGCTTCGGTATCACGTTTTGTAGTTATCGGCTTATCGCTTGTCAGTGTGGGTGCAGACTTCTTCCTTTCCCATTTTTCCTTTTTTCAAGTATAAATTCTGTTCTTAAGGATCTTATAATTCCTTCCTGATATATGGCGACTAAAATCCAAGATGAATTTTAGTAGTTTTGCGGTATGGATCTTTTACTCCTACCGAATGACGTTTCTTTACCGCTTCCCCGCGAAGGATATGCGTTCCTGTCGCTGTCTGTCTCCCCACTTTCATCAAGTTGCTCAAAATTTCTTTTTGAGACCGATACGTTCGTTCATGTATTGGATATGGACAGGAGAATAACGCAGTTTTTTTTTTTTTTTTTTTTTTATCAATTCTTGTTTTACAAAAAGGTTATTGTAACTTTTTAACATTTAATAATTATATAAGAACTACTGAAAGTAAGGATCGATGCTTAACACAGATGCATAACCCAATACTCTAATACTAATATGCAACATTAAGGAAACTCATTGTGAAGGTTGATGCATTTCAGCTCAGAAAAACTGGAAGTAGTAGGAACTGCTGTTATTGCACTTAAATTTAAATATGTAAAAGAGATTTTTGTATGCAGGGACTGAAGTTTGATTTGCTTTGGTGATGTCATGGAATGATGAATTTGGAATAATATATTTGGTTTTGTCTGTTTTGTTATGTGAAAAACCTAGGTGATTGGAAGTCATCATGGACAACATTTTGCATCATATGTTTTGTTTTAGAGAAGGGTCCTTGTATCTTAGGCCTTGCTGATATTAAACCTGTCTACTTCAACTTAGAAAGTGCTGTCATTTTTACTGCAATTTTTTTTTTATTTATCTCTCATCTTTTGGAATGAATATTGTTATCCCAATAGTTTTCTGGGAGGTGTAACATCGATTTTTCTCTCTGTCTCTTTCCTCTTTCTATTTTTCCTGCATAAATATGTTAGCTATTCACTTTCTCATGTTTTAATTCTCTGTTTAAAGATTATGGCAATGCGGCATCCAAGGAGACTTGTCCTATCTGGTTGTATGACAGCTTTGATTGTAAGTATGTTTGTCAAAAGTTACCTTTCATTTTTCATTGCATGTGCCATCACTACTTTCACTGTCTATGCCAATGCCTCTTAACTTAACTTACTCAGTTGTTTTGCTGTTTTTAAGGTGATGACCGCTCTTTCTGTTCTGGTTGGCTGGGCTGCACCAAATTTGGTAAGAAAATTGATCCCTTGAATTGAATGCCTCATACTTGGCTTGTTTATTTTCTATCTGGTAGAGCTGGGACAAGTAAAAAATTTAAGCACACTTTTTGTATGCATGTGTTGTAGATGCTAATTTTTCACATGCTATTTGATAGTTGTGCTTAATACTTTGGATGCAAGATACTAGGTTTGTAATGTTGAAGTTAAACCAATAAATCTGTGCTTGCAATTTGCTTTACTTTTGCTTTCTTCTTCCCATGGATCAGATTTATGCCACTACATAATACAGTAAACGGACCTCTTGAGTGTTTCTTTCATGGGAAAATTTAATTGCTGCTTTTGTTTTTCTTTTTTTTGGATTGAAGTCTAATTGATTGATTGTTAATTAAGAAATCATAAGAAACGTTTTAAAGAAACTATCAGGTCACTTAGATCTATATTTTCGCCTCATTTATGAAGGGAGGTAGTTTTAGATGAATGCAATTAGGAACCAGGTCTTGATACTTTATGTTGTATTGGTAAGCTGGAGTGCTAAACCATTTCATCTGAATTAATGTTTTTTTACAAACAAATTGAGACTTTGAAACTTGAAATGGTAAAGTCCTTCCTTGACCTTTGATATCATCCTTTGTAATTTAGTTGCTATCCTTATTGTTCAGCCAAGTTGCTTGCTCAAGCAAGCAATTACTTTTGATTCCTCCCTGATCATATTCTTCTCCACTTGTATTGTTCTTTGCATTGTAATGTACTCTACTTTATGCAGATTTCACGTAAGTGGGCACATCATATCACAACTCTTTTGTTCCTTGGTTTTGGGCTGTGGTCTTTATGGGATGCATTTCATGATGAAGGGTAATGATTCCTTGTTATTTTGTATTTTTTTGTGGATATTAATTTAATTTTCTAGGTGCACGTAATAACCATATTGTTTGACATATTTTGTTATATTTTATTGGCAGGGAATCGGAAGAACTGGCTGAAGTTGAAGCTAAATTGGTAAGATTTTTATTTCTAATTCCCTTCTGCAGTACATACACTTAGATGGTAATCTATTTTTTAACTCAGCTGTCTCTTGTGCTCAGGATGCTGATTTTAAGGCTAACAAAAAAGGTTCCAAAGATGGAAATAAGGTATATTGTATTTTCAGAAAGAGATCATACATCTTCTTACCCCTAGTAAAACTGTCATTCAATAGTCATTTGAAAAAGTGTTGATTCCAATTTTGTTTATAGAAAGAATTCGAGAAATTCTACTTAACAACTCTTAACCATTTGGGACATGGGAGGGATTCTAGATGTATGATGTTAACCAACCTTTTCAGGAAGTAACTTTACTTATAATTTTTAATTTCATTTGATGATGCATGTCCTTTGCTTTTATAGGCTATCTCTGTTACTTCGTTGTCTAGCTTGGTGTTGGAATTATAATAGCATTTTATGTTATGATTTAAAATAAACACGTATTAATTATTTAAGAGCAGGGCAATTGAGAGTTTATAATTCAGTTTGCAGATCATTGATATATTTATTCCTTCAAAAATCTCTTCCTCTATAAATTGATTATTATTCTTATCGTTTTTTTAATGGGATGGAACTGGTTGAAGTTTTTGCTACAGAAGTAAGGAGAAGCTGGAGTATTTCTCCTTTCCTTTATATCCATTTTGAAAATGCAGATATGTATGATAGTTACATGGTAATTTGGAATCATAAAGTAAAGCTTAACACTTACGACAGGATGATGATGATGTGAAGAAGCACAATCGCTCAATTCTCTTGCAGTTCTTGTCACCAATATATTTGAAGGTTATACTTTGTAACCTATAATACTTCAGGTAAATGTAAATGTAAGTCGTAAGATAATTAACTCACAATCTTTCCTCTGGACTTTTTGTAGGCATTTTCCATTACCTTTTTTGGTGAATGGGGTGACAAGAGTCAGGTTAGTATCATAATTGAGAACGACCATTTCTAACTTACGATTTTGTTTCACTCCTATAGTACTGATATTTGAGAAACTTTATCAGCTAGCAACGATTGGTTTAGCTGCAGATGAAAACCCACTAGGTGTTGTTCTTGGTGGAATATTGTAAGTTGTGTCTACCAACGTATCCCTTCTATTTCAGATTGATTCTTTGTGCATGATGCTGTTCCTTTTTTATATATTTTTTTCTTCAATAGACAAATTTCCTTTGCATTCTTTTTCCGAAGAGATCCTACTTTGTCCTATGAGTACAGATTGTGTTTTGCCTTAATCTATGGAATTCATTTTGGGCTGTAGCAATTATTTGAAACTATAATGGTCAACGAATCATCAGCAATATTAGTTTTGTTATCTCAATGTACGTCAACCTCAATAGTTAGGCTTCCATAATTGTTTTCTTCAATGTAATCCTCTAATTTTGTGCGTCAAATGAAAAAATCTTTAAAGTTGATTGACAAGCTGTTTTTAACCTCAAATTTTGTTCTATAGCAAAAATGAATGGCTTATTGCTTACTGGAAGTAATAGGTCTCAGTAGGAACCTACTTGTATATTGTAGTAATGATAATCTTTCTGGATGTGAATGGACAACGGCACAGTTACCTATCTGCTTTTCCATTTGGGAATGTCATTTATAATTTTCTTTCAGGGGTCAGGCATTGTGTACAACTGCTGCAGTTCTTGGCGGAAGGAGCTTGGCATCACAAATATCTGAAAAAATAGTACTCAACATTTGATTAGCTCTTTTTTTCACACTATAGTTACTGTTAAGATTGTTATAATGTAATCAAGTCATAATTTTGTTTCTCCCTTTCAGGTTGCTCTCTCAGGTGGGGTTCTGTTCATTGTTTTCGGAATTCAGTCCTTCCTCTCAACTGTCGCGGTGTAATTTTTTCAAGCTTGTTACG ATGACTGTGCTCTCCGAGATCGGCGATAAAACATTCTTCGCCGCTGCGATTATGGCAATGCGGCATCCAAGGAGACTTGTCCTATCTGGTTGTATGACAGCTTTGATTGTGATGACCGCTCTTTCTGTTCTGGTTGGCTGGGCTGCACCAAATTTGATTTCACGTAAGTGGGCACATCATATCACAACTCTTTTGTTCCTTGGTTTTGGGCTGTGGTCTTTATGGGATGCATTTCATGATGAAGGGGAATCGGAAGAACTGGCTGAAGTTGAAGCTAAATTGGATGCTGATTTTAAGGCTAACAAAAAAGGTTCCAAAGATGGAAATAAGGATGATGATGATGTGAAGAAGCACAATCGCTCAATTCTCTTGCAGTTCTTGTCACCAATATATTTGAAGGCATTTTCCATTACCTTTTTTGGTGAATGGGGTGACAAGAGTCAGCTAGCAACGATTGGTTTAGCTGCAGATGAAAACCCACTAGGTGTTGTTCTTGGTGGAATATTGGGTCAGGCATTGTGTACAACTGCTGCAGTTCTTGGCGGAAGGAGCTTGGCATCACAAATATCTGAAAAAATAGTTGCTCTCTCAGGTGGGGTTCTGTTCATTGTTTTCGGAATTCAGTCCTTCCTCTCAACTGTCGCGGTGTAA ATGACTGTGCTCTCCGAGATCGGCGATAAAACATTCTTCGCCGCTGCGATTATGGCAATGCGGCATCCAAGGAGACTTGTCCTATCTGGTTGTATGACAGCTTTGATTGTGATGACCGCTCTTTCTGTTCTGGTTGGCTGGGCTGCACCAAATTTGATTTCACGTAAGTGGGCACATCATATCACAACTCTTTTGTTCCTTGGTTTTGGGCTGTGGTCTTTATGGGATGCATTTCATGATGAAGGGGAATCGGAAGAACTGGCTGAAGTTGAAGCTAAATTGGATGCTGATTTTAAGGCTAACAAAAAAGGTTCCAAAGATGGAAATAAGGATGATGATGATGTGAAGAAGCACAATCGCTCAATTCTCTTGCAGTTCTTGTCACCAATATATTTGAAGGCATTTTCCATTACCTTTTTTGGTGAATGGGGTGACAAGAGTCAGCTAGCAACGATTGGTTTAGCTGCAGATGAAAACCCACTAGGTGTTGTTCTTGGTGGAATATTGGGTCAGGCATTGTGTACAACTGCTGCAGTTCTTGGCGGAAGGAGCTTGGCATCACAAATATCTGAAAAAATAGTTGCTCTCTCAGGTGGGGTTCTGTTCATTGTTTTCGGAATTCAGTCCTTCCTCTCAACTGTCGCGGTGTAA
BLAST of CSPI06G03080 vs. Swiss-Prot
Match: GDT14_ARATH (GDT1-like protein 4 OS=Arabidopsis thaliana GN=At1g25520 PE=2 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 3.8e-93 Identity = 175/227 (77.09%), Postives = 201/227 (88.55%), Query Frame = 1
BLAST of CSPI06G03080 vs. Swiss-Prot
Match: GDT15_ORYSJ (GDT1-like protein 5 OS=Oryza sativa subsp. japonica GN=Os08g0433100 PE=2 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 1.8e-90 Identity = 168/226 (74.34%), Postives = 199/226 (88.05%), Query Frame = 1
BLAST of CSPI06G03080 vs. Swiss-Prot
Match: GDT15_ARATH (GDT1-like protein 5 OS=Arabidopsis thaliana GN=At1g68650 PE=1 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 4.3e-89 Identity = 171/225 (76.00%), Postives = 193/225 (85.78%), Query Frame = 1
BLAST of CSPI06G03080 vs. Swiss-Prot
Match: GDT13_ORYSJ (GDT1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0472500 PE=2 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 2.0e-41 Identity = 98/216 (45.37%), Postives = 138/216 (63.89%), Query Frame = 1
BLAST of CSPI06G03080 vs. Swiss-Prot
Match: GDT13_ORYSI (GDT1-like protein 3 OS=Oryza sativa subsp. indica GN=OsI_36063 PE=3 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 2.0e-41 Identity = 98/216 (45.37%), Postives = 138/216 (63.89%), Query Frame = 1
BLAST of CSPI06G03080 vs. TrEMBL
Match: A0A0A0K858_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G031450 PE=4 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 1.9e-120 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of CSPI06G03080 vs. TrEMBL
Match: M5XGN1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010936mg PE=4 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 1.3e-100 Identity = 193/226 (85.40%), Postives = 209/226 (92.48%), Query Frame = 1
BLAST of CSPI06G03080 vs. TrEMBL
Match: D7T981_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03200 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 1.1e-99 Identity = 188/228 (82.46%), Postives = 208/228 (91.23%), Query Frame = 1
BLAST of CSPI06G03080 vs. TrEMBL
Match: B9HWL1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s13850g PE=4 SV=2) HSP 1 Score: 369.8 bits (948), Expect = 2.5e-99 Identity = 189/226 (83.63%), Postives = 205/226 (90.71%), Query Frame = 1
BLAST of CSPI06G03080 vs. TrEMBL
Match: B9HJ03_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s11670g PE=4 SV=2) HSP 1 Score: 367.9 bits (943), Expect = 9.3e-99 Identity = 188/226 (83.19%), Postives = 205/226 (90.71%), Query Frame = 1
BLAST of CSPI06G03080 vs. TAIR10
Match: AT1G25520.1 (AT1G25520.1 Uncharacterized protein family (UPF0016)) HSP 1 Score: 342.4 bits (877), Expect = 2.1e-94 Identity = 175/227 (77.09%), Postives = 201/227 (88.55%), Query Frame = 1
BLAST of CSPI06G03080 vs. TAIR10
Match: AT1G68650.1 (AT1G68650.1 Uncharacterized protein family (UPF0016)) HSP 1 Score: 328.9 bits (842), Expect = 2.4e-90 Identity = 171/225 (76.00%), Postives = 193/225 (85.78%), Query Frame = 1
BLAST of CSPI06G03080 vs. TAIR10
Match: AT5G36290.1 (AT5G36290.1 Uncharacterized protein family (UPF0016)) HSP 1 Score: 164.9 bits (416), Expect = 6.1e-41 Identity = 95/227 (41.85%), Postives = 138/227 (60.79%), Query Frame = 1
BLAST of CSPI06G03080 vs. TAIR10
Match: AT4G13590.1 (AT4G13590.1 Uncharacterized protein family (UPF0016)) HSP 1 Score: 128.3 bits (321), Expect = 6.3e-30 Identity = 92/234 (39.32%), Postives = 129/234 (55.13%), Query Frame = 1
BLAST of CSPI06G03080 vs. TAIR10
Match: AT1G64150.1 (AT1G64150.1 Uncharacterized protein family (UPF0016)) HSP 1 Score: 102.8 bits (255), Expect = 2.8e-22 Identity = 74/225 (32.89%), Postives = 109/225 (48.44%), Query Frame = 1
BLAST of CSPI06G03080 vs. NCBI nr
Match: gi|449465635|ref|XP_004150533.1| (PREDICTED: GDT1-like protein 4 [Cucumis sativus]) HSP 1 Score: 439.9 bits (1130), Expect = 2.8e-120 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of CSPI06G03080 vs. NCBI nr
Match: gi|659089684|ref|XP_008445643.1| (PREDICTED: GDT1-like protein 4 [Cucumis melo]) HSP 1 Score: 434.5 bits (1116), Expect = 1.2e-118 Identity = 227/230 (98.70%), Postives = 228/230 (99.13%), Query Frame = 1
BLAST of CSPI06G03080 vs. NCBI nr
Match: gi|645276228|ref|XP_008243189.1| (PREDICTED: GDT1-like protein 4 [Prunus mume]) HSP 1 Score: 374.4 bits (960), Expect = 1.4e-100 Identity = 193/226 (85.40%), Postives = 209/226 (92.48%), Query Frame = 1
BLAST of CSPI06G03080 vs. NCBI nr
Match: gi|596214811|ref|XP_007223905.1| (hypothetical protein PRUPE_ppa010936mg [Prunus persica]) HSP 1 Score: 374.0 bits (959), Expect = 1.9e-100 Identity = 193/226 (85.40%), Postives = 209/226 (92.48%), Query Frame = 1
BLAST of CSPI06G03080 vs. NCBI nr
Match: gi|225423915|ref|XP_002281939.1| (PREDICTED: GDT1-like protein 5 [Vitis vinifera]) HSP 1 Score: 370.9 bits (951), Expect = 1.6e-99 Identity = 188/228 (82.46%), Postives = 208/228 (91.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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