CSPI05G06050 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G06050
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionBasic helix-loop-helix transcription factor
LocationChr5 : 5493350 .. 5494795 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTGAATAATGTTGAGTCACCATTTTTATTTGACGACCTTGGTGATGAACTATTGCCTCTTCCTTCTCTTTCTTGCATAGATAATTGTTTTGTTCCTCAGTTCCCCTCCATCTTGGAGAACAATAATAACTCAACTGTCTCTCCAACATTAAAAAATAGTCGCCGGAAAAAGCCAGTACCGGCCAATACTTCAGATGATAAAGACGATGAGAACAACTCCAATGAACACAAAAAGAAGAAGATAATGCATAGAGATGTGGAGCGCCAAAGAAGACAAGAAATGTCTTCTCTTTATTCCACTCTTCGCTCACTTCTCCCTATTGAATACCTCAAGGTAAGAATAAGATAAAGATAATCTCATGTCTCTCACTTTAATTCACTAAATATTGAATTTAACCCTTAAAATTGCTAAAAATATTTATAAGTATAATAAAACTTCAAATTTTAATAAAAGTGATATTTTTTTACTATCTATTTGTGATTTTTATATATATATTTATTAACATTTTAGTTCATTTTGTTATATTTAAAAACAAATCTAACTTTATTGATAAATTTTCTTACAAAAAAAATTGAAAAGAAAAAAAGGAGAGAAAAGTTTGTTTATAGGTTAATACATTAAGTTGGTTCATATACTTAGAAAATTATTCAATTTTAGTTTCAATTTTAGTTTCTATACTCTAAAATGTTCAATATTATTTCTTTAATTTTTTTTAAAAAATTTAATACTTCTAAATTTAATATTTATTGAAATGGTTTAAATAATAATAAAACAAAATTAGAATAACATGTTCCCAAAATCTATAGTGAACGCTCATGGATGATAAAAAGGTTTTTCTTATAGTTTGCCACATATATTACTATTTGGAGTTGCAGAAGATGGACACATATCTCACTCAATTTTTAGTGGATACATGAACTATTTTTCACACTAGCTAAATGAATGATTTTGAAATGAAACTTCTATTTATCTAATAAACTTTCCAATAATATGTAGGGAAAACGGTCGATATGCGATCACATGCACGAGACAGTTAAGTACATTCGGTACATGCAAAGCAAGATCCAAGAACTATGTGATAAAAGAGATGAGTTGAAAAAATTACAATCCAATAACCAAAATCCTGGCATGGTAGAAACAGAAACATTACAATCCACAAAAAGAGACAAAGTTGTGGTGAGAGCAAGAGATGGATCAGGAGGAATTCAAGTTATTTTAGACACTCCCACTCAACATAGACTCCCTCTTTCAAACATTCTTGAAGCTTTAATTGATCAAGGCTTTGAAATCCTTAGCTGCAGCTCCAACAAACTAAATGACAGGTTCCTTCACACCATTGAATCTCAACCAGCCGTCTTTACCGATACCAATTCTCCTTTAATCGACATTTCTGACCTTCAATATATGTTGGCAAATTTGGAGTATTGTCCTTTGGATTAA

mRNA sequence

ATGGATTTGAATAATGTTGAGTCACCATTTTTATTTGACGACCTTGGTGATGAACTATTGCCTCTTCCTTCTCTTTCTTGCATAGATAATTGTTTTGTTCCTCAGTTCCCCTCCATCTTGGAGAACAATAATAACTCAACTGTCTCTCCAACATTAAAAAATAGTCGCCGGAAAAAGCCAGTACCGGCCAATACTTCAGATGATAAAGACGATGAGAACAACTCCAATGAACACAAAAAGAAGAAGATAATGCATAGAGATGTGGAGCGCCAAAGAAGACAAGAAATGTCTTCTCTTTATTCCACTCTTCGCTCACTTCTCCCTATTGAATACCTCAAGGGAAAACGGTCGATATGCGATCACATGCACGAGACAGTTAAGTACATTCGGTACATGCAAAGCAAGATCCAAGAACTATGTGATAAAAGAGATGAGTTGAAAAAATTACAATCCAATAACCAAAATCCTGGCATGGTAGAAACAGAAACATTACAATCCACAAAAAGAGACAAAGTTGTGGTGAGAGCAAGAGATGGATCAGGAGGAATTCAAGTTATTTTAGACACTCCCACTCAACATAGACTCCCTCTTTCAAACATTCTTGAAGCTTTAATTGATCAAGGCTTTGAAATCCTTAGCTGCAGCTCCAACAAACTAAATGACAGGTTCCTTCACACCATTGAATCTCAACCAGCCGTCTTTACCGATACCAATTCTCCTTTAATCGACATTTCTGACCTTCAATATATGTTGGCAAATTTGGAGTATTGTCCTTTGGATTAA

Coding sequence (CDS)

ATGGATTTGAATAATGTTGAGTCACCATTTTTATTTGACGACCTTGGTGATGAACTATTGCCTCTTCCTTCTCTTTCTTGCATAGATAATTGTTTTGTTCCTCAGTTCCCCTCCATCTTGGAGAACAATAATAACTCAACTGTCTCTCCAACATTAAAAAATAGTCGCCGGAAAAAGCCAGTACCGGCCAATACTTCAGATGATAAAGACGATGAGAACAACTCCAATGAACACAAAAAGAAGAAGATAATGCATAGAGATGTGGAGCGCCAAAGAAGACAAGAAATGTCTTCTCTTTATTCCACTCTTCGCTCACTTCTCCCTATTGAATACCTCAAGGGAAAACGGTCGATATGCGATCACATGCACGAGACAGTTAAGTACATTCGGTACATGCAAAGCAAGATCCAAGAACTATGTGATAAAAGAGATGAGTTGAAAAAATTACAATCCAATAACCAAAATCCTGGCATGGTAGAAACAGAAACATTACAATCCACAAAAAGAGACAAAGTTGTGGTGAGAGCAAGAGATGGATCAGGAGGAATTCAAGTTATTTTAGACACTCCCACTCAACATAGACTCCCTCTTTCAAACATTCTTGAAGCTTTAATTGATCAAGGCTTTGAAATCCTTAGCTGCAGCTCCAACAAACTAAATGACAGGTTCCTTCACACCATTGAATCTCAACCAGCCGTCTTTACCGATACCAATTCTCCTTTAATCGACATTTCTGACCTTCAATATATGTTGGCAAATTTGGAGTATTGTCCTTTGGATTAA
Homology
[Close]
BLAST of CSPI05G06050 vs. Swiss-Prot
Match: BH126_ARATH (Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.5e-24
Identity = 62/172 (36.05%), Postives = 111/172 (64.53%), Query Frame = 1 

Query: 63  ANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHM 122
           + T+ + DD       KKKK++HRD+ERQRRQEM++L++TLR+ LP++Y+KGKR++ DH+
Sbjct: 30  SGTAHETDDNK-----KKKKLLHRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHV 89

Query: 123 HETVKYIRYMQSKIQELCDKRDELKKL----QSNNQNPGMVETETLQSTKRDKVVVRARD 182
           +  V +I+  +++I+EL  +RDEL +       +N +PG   ++     K +   V  + 
Sbjct: 90  NGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDV---GKSEPATVMVQP 149

Query: 183 GSGGIQVILDTPTQ--HRLPLSNILEALIDQGFEILSCSSNKLNDRFLHTIE 229
              G++V++ + +     LPLS +LE + ++G E++S  + ++NDR +HTI+
Sbjct: 150 HVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLMHTIQ 193

[Close]
BLAST of CSPI05G06050 vs. Swiss-Prot
Match: BH036_ARATH (Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.6e-21
Identity = 63/179 (35.20%), Postives = 114/179 (63.69%), Query Frame = 1 

Query: 81  KKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQSKIQELC 140
           +K+MHR+ ERQRRQEM+SLY++LRSLLP+ ++KGKRS  D ++E V YI+Y+Q KI+EL 
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 141 DKRDELKKLQSNN---QNPGMVETETLQSTKRDKVVVRARDGSGGIQVILDTPTQHRLP- 200
            +RD+L  L   +    + G  + +    + ++ VVV  R    G++++L +      P 
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVV--RQCLVGVEIMLSSRCCGGQPR 121

Query: 201 LSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSPLIDISDLQYMLANLE 256
            S++L+ L + G  +L+  S+ ++DR ++TI+++     +  + +ID+++L+  L  ++
Sbjct: 122 FSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAE----VNDMALMIDLAELEKRLIRMK 174

[Close]
BLAST of CSPI05G06050 vs. Swiss-Prot
Match: BH055_ARATH (Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.8e-20
Identity = 71/222 (31.98%), Postives = 120/222 (54.05%), Query Frame = 1 

Query: 32  FVPQFPSILENNNNSTVSPTLKNSRRK----KPVPANTSDDKDDENN------------- 91
           F P F    + + +S ++P+ + S ++     PV  +   + D   N             
Sbjct: 9   FTPNFAYENDLDFSSLITPSTRVSFQEPKPCNPVIHSAGIENDGRQNCETTMTLSEIMKG 68

Query: 92  SNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQS 151
            +E K K+  H+++ERQRRQE +SL+  LR LLP +Y+KGKRS  DH+ E V YI+ +Q 
Sbjct: 69  DDEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQK 128

Query: 152 KIQELCDKRDELKKLQSNNQNPGMVETETLQSTK-----RDKVVVRARDGSGGIQVILDT 211
           KI+E+ +KRD +K+  ++  + G     +L S+         + V  R    G+++++  
Sbjct: 129 KIKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSC 188

Query: 212 PTQHRLPLSNILEALI-DQGFEILSCSSNKLNDRFLHTIESQ 231
             +H   LS++L+ L  +Q F I+SC S +L+  F+HTI S+
Sbjct: 189 CNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASE 230

[Close]
BLAST of CSPI05G06050 vs. Swiss-Prot
Match: BH125_ARATH (Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.4e-19
Identity = 72/219 (32.88%), Postives = 123/219 (56.16%), Query Frame = 1 

Query: 29  DNCFVPQFPSILENNNNSTVSPTLKNSRRKKPVPANTSDDKDDENNSNEHKKKKIMHRDV 88
           D+  +  F S   N+   +++  +  S +K+ +   T    +   N ++ + KK+ HRD+
Sbjct: 22  DSFLLSPFISYQNNDVFHSITNKIGGSNKKRSLCDITYGANEANKNDDDRESKKMKHRDI 81

Query: 89  ERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQSKIQELCDKRDELKK 148
           ERQRRQE+SSL+  LR+LLP +Y++GKRS  DH+ + V YI+ +Q KI+EL +KR+ +KK
Sbjct: 82  ERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKDLQIKIKELNEKRNRVKK 141

Query: 149 -LQSNNQNPGMVE--TETLQSTKR-----------DK-VVVRARDGSGGIQVILDTPT-Q 208
            + +       +E  T +L S+             DK + V       G+++I+     +
Sbjct: 142 VISATTTTHSAIEECTSSLSSSAASTLSSSCSCVGDKHITVVVTPCLVGVEIIISCCLGR 201

Query: 209 HRLPLSNILEALI-DQGFEILSCSSNKLNDRFLHTIESQ 231
           ++  LS++L+ L  +Q F ++SC S +   RF+HTI SQ
Sbjct: 202 NKSCLSSVLQMLAQEQRFSVVSCLSARRQQRFMHTIVSQ 240

[Close]
BLAST of CSPI05G06050 vs. Swiss-Prot
Match: BH120_ARATH (Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-19
Identity = 60/185 (32.43%), Postives = 107/185 (57.84%), Query Frame = 1 

Query: 53  KNSRRKKPVPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYL 112
           K +R +  +P    + K         K+KK++HR++ERQRRQEM+ L+++LRS LP++Y+
Sbjct: 8   KKTRHQSHMPQERDETK---------KEKKLLHRNIERQRRQEMAILFASLRSQLPLKYI 67

Query: 113 KGKRSICDHMHETVKYIRYMQSKIQELCDKRDELKK-------LQSNNQNPGMVETETLQ 172
           KGKR++ DH++  V +I+  Q++I++L  +RDELK+       L  +    G        
Sbjct: 68  KGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSG-------- 127

Query: 173 STKRDKVVVRARDGSGGIQVILDTPTQ--HRLPLSNILEALIDQGFEILSCSSNKLNDRF 229
           S++ +   V  +    G +V++ +        PLS +LE L  QG E++S  + ++N+R 
Sbjct: 128 SSRSEPASVMVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERL 175

[Close]
BLAST of CSPI05G06050 vs. TrEMBL
Match: A0A0A0KKN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 7.7e-142
Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 1 

Query: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILENNNNSTVSPTLKNSRRKKP 60
           MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILENNNNSTVSPTLKNSRRKKP
Sbjct: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILENNNNSTVSPTLKNSRRKKP 60

Query: 61  VPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICD 120
           VPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICD
Sbjct: 61  VPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICD 120

Query: 121 HMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDGS 180
           HMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDGS
Sbjct: 121 HMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDGS 180

Query: 181 GGIQVILDTPTQHRLPLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSP 240
           GGIQVILDTPTQHRL LSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSP
Sbjct: 181 GGIQVILDTPTQHRLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSP 240

Query: 241 LIDISDLQYMLANLEYCPLD 261
           LIDISDLQYMLANLEYCPLD
Sbjct: 241 LIDISDLQYMLANLEYCPLD 260

[Close]
BLAST of CSPI05G06050 vs. TrEMBL
Match: A0A097IYP0_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.3e-68
Identity = 156/263 (59.32%), Postives = 191/263 (72.62%), Query Frame = 1 

Query: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILE-NNNNSTVSPTLKNSRRKK 60
           MDL+ ++SPF FD + DEL PLPSLS I        P I   NN N  +S   K  RR+K
Sbjct: 1   MDLDCIQSPFPFDQV-DELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRK 60

Query: 61  PVPANTSDDKDDEN-NSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSI 120
               NTS D +DEN N NEHKKKKI+HRDVERQRRQEMS+LY+ LRSLLP+EYLKGKRSI
Sbjct: 61  S--PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSI 120

Query: 121 CDHMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVET-ETLQSTKRDKVVVRAR 180
           CDHMHETVKYI++MQ+KIQ L +KRDELKK   + ++ G + T ETL S+KRD V+V  R
Sbjct: 121 CDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPR 180

Query: 181 DGSGGIQVILDTPTQHRLPLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDT 240
              GG+Q++LDT T HRLPLSN+++ LI Q  +I+SC S + NDRFLHTIE++ AV  +T
Sbjct: 181 -SCGGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVET 240

Query: 241 NSPLIDISDLQYMLANLEYCPLD 261
               ID+S+LQ  L NLEY PLD
Sbjct: 241 ----IDMSELQNKLTNLEYFPLD 255

[Close]
BLAST of CSPI05G06050 vs. TrEMBL
Match: A0A0A0KMQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 9.6e-68
Identity = 155/263 (58.94%), Postives = 189/263 (71.86%), Query Frame = 1 

Query: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILE-NNNNSTVSPTLKNSRRKK 60
           MDL+ ++SPF FD + DEL PLPSLS I        P I   NN N  +S   K  RR+K
Sbjct: 1   MDLDCIQSPFPFDQV-DELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRK 60

Query: 61  PVPANTSDDKDDEN-NSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSI 120
               NTS D +DEN N NEHKKKKI+HRDVERQRRQEMS+LY+ LRSLLP+EYLKGKRSI
Sbjct: 61  S--PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSI 120

Query: 121 CDHMHETVKYIRYMQSKIQELCDKRDELKK-LQSNNQNPGMVETETLQSTKRDKVVVRAR 180
           CDHMHETVKYI++MQ+KIQ L +KRDELKK ++    +  +   ETL S+KRD V+V  R
Sbjct: 121 CDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPR 180

Query: 181 DGSGGIQVILDTPTQHRLPLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDT 240
              GG+Q++LDT T HRLPLSN+++ LI Q  +I+SC S + NDRFLHTIES+ AV  +T
Sbjct: 181 -SCGGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVET 240

Query: 241 NSPLIDISDLQYMLANLEYCPLD 261
               ID+S+LQ  L NLEY PLD
Sbjct: 241 ----IDMSELQNKLTNLEYFPLD 255

[Close]
BLAST of CSPI05G06050 vs. TrEMBL
Match: A0A097IYN6_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.5e-65
Identity = 151/260 (58.08%), Postives = 187/260 (71.92%), Query Frame = 1 

Query: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILENNNNSTVSPTLKNSRRKKP 60
           M++ N ESPF FD +G++L+PLPSL        P     L+N  N  VS   KN RRKKP
Sbjct: 1   MEMFNAESPFSFD-VGEDLVPLPSLPSSSVISPP-----LDNYGNR-VSQKPKNGRRKKP 60

Query: 61  VPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICD 120
           +P   +DD  DEN+ +E KKKKI+HRDVERQRRQEMSSLY+TLRSLLP+EYLKGKRSI D
Sbjct: 61  LPNTCNDDGGDENH-DEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISD 120

Query: 121 HMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDGS 180
           HM ETV YI++MQ +IQ+L DKR  L++L S         TETL S++R   VVRA+DG 
Sbjct: 121 HMQETVSYIQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGI 180

Query: 181 GGIQVILDTPTQHRLPLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSP 240
            GIQV+LDT T+ RLPLS  ++AL+ +G EIL+C SN+LN+RF+HTIE QP +  D   P
Sbjct: 181 -GIQVVLDTATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYP 240

Query: 241 LIDISDLQYMLANLEYCPLD 261
            ID+S LQ+ LANLEY PLD
Sbjct: 241 TIDVSVLQHKLANLEYYPLD 251

[Close]
BLAST of CSPI05G06050 vs. TrEMBL
Match: B9GKR8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s08380g PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 9.7e-36
Identity = 93/203 (45.81%), Postives = 133/203 (65.52%), Query Frame = 1 

Query: 51  TLKNSRRKKPVPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIE 110
           T    RRK P+   +  D+    N N++KKKKI+HRD+ERQRRQEM++LY +LR LLP++
Sbjct: 52  TQHGRRRKSPIALGSVKDE----NPNDNKKKKIIHRDIERQRRQEMANLYGSLRCLLPLK 111

Query: 111 YLKGKRSICDHMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRD 170
           YLKGKRS  DH+H+TV YI++ + KIQ+L DK+DELK+  S +        E L+  +RD
Sbjct: 112 YLKGKRSTSDHIHQTVYYIKHQEEKIQKLIDKKDELKRYLSTSS-----ALENLEGCERD 171

Query: 171 KVVVRARDGSGGIQVILDTPTQHRLPLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQ 230
            + VR R    G++V ++T  +   PLS +L  LI++GF ++SC S K+N+R LH I S+
Sbjct: 172 TLTVRTR--CVGVEVDINTALKKGFPLSRVLAILIEEGFSVVSCISTKVNERMLHNIISE 231

Query: 231 PAVFTDTNSPLIDISDLQYMLAN 254
               TD  S  +DIS+LQ  L +
Sbjct: 232 ---VTDGRS--LDISELQQKLTS 238

[Close]
BLAST of CSPI05G06050 vs. TAIR10
Match: AT4G25410.1 (AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-25
Identity = 62/172 (36.05%), Postives = 111/172 (64.53%), Query Frame = 1 

Query: 63  ANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHM 122
           + T+ + DD       KKKK++HRD+ERQRRQEM++L++TLR+ LP++Y+KGKR++ DH+
Sbjct: 30  SGTAHETDDNK-----KKKKLLHRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHV 89

Query: 123 HETVKYIRYMQSKIQELCDKRDELKKL----QSNNQNPGMVETETLQSTKRDKVVVRARD 182
           +  V +I+  +++I+EL  +RDEL +       +N +PG   ++     K +   V  + 
Sbjct: 90  NGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDV---GKSEPATVMVQP 149

Query: 183 GSGGIQVILDTPTQ--HRLPLSNILEALIDQGFEILSCSSNKLNDRFLHTIE 229
              G++V++ + +     LPLS +LE + ++G E++S  + ++NDR +HTI+
Sbjct: 150 HVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLMHTIQ 193

[Close]
BLAST of CSPI05G06050 vs. TAIR10
Match: AT5G51780.1 (AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-22
Identity = 63/179 (35.20%), Postives = 114/179 (63.69%), Query Frame = 1 

Query: 81  KKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQSKIQELC 140
           +K+MHR+ ERQRRQEM+SLY++LRSLLP+ ++KGKRS  D ++E V YI+Y+Q KI+EL 
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 141 DKRDELKKLQSNN---QNPGMVETETLQSTKRDKVVVRARDGSGGIQVILDTPTQHRLP- 200
            +RD+L  L   +    + G  + +    + ++ VVV  R    G++++L +      P 
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVV--RQCLVGVEIMLSSRCCGGQPR 121

Query: 201 LSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSPLIDISDLQYMLANLE 256
            S++L+ L + G  +L+  S+ ++DR ++TI+++     +  + +ID+++L+  L  ++
Sbjct: 122 FSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAE----VNDMALMIDLAELEKRLIRMK 174

[Close]
BLAST of CSPI05G06050 vs. TAIR10
Match: AT1G12540.1 (AT1G12540.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-21
Identity = 71/222 (31.98%), Postives = 120/222 (54.05%), Query Frame = 1 

Query: 32  FVPQFPSILENNNNSTVSPTLKNSRRK----KPVPANTSDDKDDENN------------- 91
           F P F    + + +S ++P+ + S ++     PV  +   + D   N             
Sbjct: 9   FTPNFAYENDLDFSSLITPSTRVSFQEPKPCNPVIHSAGIENDGRQNCETTMTLSEIMKG 68

Query: 92  SNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQS 151
            +E K K+  H+++ERQRRQE +SL+  LR LLP +Y+KGKRS  DH+ E V YI+ +Q 
Sbjct: 69  DDEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQK 128

Query: 152 KIQELCDKRDELKKLQSNNQNPGMVETETLQSTK-----RDKVVVRARDGSGGIQVILDT 211
           KI+E+ +KRD +K+  ++  + G     +L S+         + V  R    G+++++  
Sbjct: 129 KIKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSC 188

Query: 212 PTQHRLPLSNILEALI-DQGFEILSCSSNKLNDRFLHTIESQ 231
             +H   LS++L+ L  +Q F I+SC S +L+  F+HTI S+
Sbjct: 189 CNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASE 230

[Close]
BLAST of CSPI05G06050 vs. TAIR10
Match: AT1G62975.1 (AT1G62975.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 98.2 bits (243), Expect = 7.9e-21
Identity = 72/219 (32.88%), Postives = 123/219 (56.16%), Query Frame = 1 

Query: 29  DNCFVPQFPSILENNNNSTVSPTLKNSRRKKPVPANTSDDKDDENNSNEHKKKKIMHRDV 88
           D+  +  F S   N+   +++  +  S +K+ +   T    +   N ++ + KK+ HRD+
Sbjct: 22  DSFLLSPFISYQNNDVFHSITNKIGGSNKKRSLCDITYGANEANKNDDDRESKKMKHRDI 81

Query: 89  ERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQSKIQELCDKRDELKK 148
           ERQRRQE+SSL+  LR+LLP +Y++GKRS  DH+ + V YI+ +Q KI+EL +KR+ +KK
Sbjct: 82  ERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKDLQIKIKELNEKRNRVKK 141

Query: 149 -LQSNNQNPGMVE--TETLQSTKR-----------DK-VVVRARDGSGGIQVILDTPT-Q 208
            + +       +E  T +L S+             DK + V       G+++I+     +
Sbjct: 142 VISATTTTHSAIEECTSSLSSSAASTLSSSCSCVGDKHITVVVTPCLVGVEIIISCCLGR 201

Query: 209 HRLPLSNILEALI-DQGFEILSCSSNKLNDRFLHTIESQ 231
           ++  LS++L+ L  +Q F ++SC S +   RF+HTI SQ
Sbjct: 202 NKSCLSSVLQMLAQEQRFSVVSCLSARRQQRFMHTIVSQ 240

[Close]
BLAST of CSPI05G06050 vs. TAIR10
Match: AT5G51790.1 (AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-20
Identity = 60/185 (32.43%), Postives = 107/185 (57.84%), Query Frame = 1 

Query: 53  KNSRRKKPVPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYL 112
           K +R +  +P    + K         K+KK++HR++ERQRRQEM+ L+++LRS LP++Y+
Sbjct: 8   KKTRHQSHMPQERDETK---------KEKKLLHRNIERQRRQEMAILFASLRSQLPLKYI 67

Query: 113 KGKRSICDHMHETVKYIRYMQSKIQELCDKRDELKK-------LQSNNQNPGMVETETLQ 172
           KGKR++ DH++  V +I+  Q++I++L  +RDELK+       L  +    G        
Sbjct: 68  KGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSG-------- 127

Query: 173 STKRDKVVVRARDGSGGIQVILDTPTQ--HRLPLSNILEALIDQGFEILSCSSNKLNDRF 229
           S++ +   V  +    G +V++ +        PLS +LE L  QG E++S  + ++N+R 
Sbjct: 128 SSRSEPASVMVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERL 175

[Close]
BLAST of CSPI05G06050 vs. NCBI nr
Match: gi|449459720|ref|XP_004147594.1| (PREDICTED: transcription factor bHLH36-like [Cucumis sativus])

HSP 1 Score: 511.1 bits (1315), Expect = 1.1e-141
Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 1 

Query: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILENNNNSTVSPTLKNSRRKKP 60
           MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILENNNNSTVSPTLKNSRRKKP
Sbjct: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILENNNNSTVSPTLKNSRRKKP 60

Query: 61  VPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICD 120
           VPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICD
Sbjct: 61  VPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICD 120

Query: 121 HMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDGS 180
           HMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDGS
Sbjct: 121 HMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDGS 180

Query: 181 GGIQVILDTPTQHRLPLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSP 240
           GGIQVILDTPTQHRL LSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSP
Sbjct: 181 GGIQVILDTPTQHRLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSP 240

Query: 241 LIDISDLQYMLANLEYCPLD 261
           LIDISDLQYMLANLEYCPLD
Sbjct: 241 LIDISDLQYMLANLEYCPLD 260

[Close]
BLAST of CSPI05G06050 vs. NCBI nr
Match: gi|659073658|ref|XP_008437182.1| (PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo])

HSP 1 Score: 453.8 bits (1166), Expect = 2.1e-124
Identity = 239/262 (91.22%), Postives = 244/262 (93.13%), Query Frame = 1 

Query: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILENNNNS--TVSPTLKNSRRK 60
           MDLNNVESPF FD LGDELLPLPSLSCIDNCFVPQFPSILENNNN+  TVSP  KN RRK
Sbjct: 1   MDLNNVESPFSFD-LGDELLPLPSLSCIDNCFVPQFPSILENNNNNSITVSPRPKNGRRK 60

Query: 61  KPVPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSI 120
           KP PANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSI
Sbjct: 61  KP-PANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSI 120

Query: 121 CDHMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARD 180
           CDHMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNP MVETETL+STKRDKVVVRARD
Sbjct: 121 CDHMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPDMVETETLKSTKRDKVVVRARD 180

Query: 181 GSGGIQVILDTPTQHRLPLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTN 240
           GSGGIQVILDT T+HRLPLSNIL AL DQG EILSCSSNKLNDRFLHTIESQP VFT TN
Sbjct: 181 GSGGIQVILDTATRHRLPLSNILVALTDQGLEILSCSSNKLNDRFLHTIESQP-VFTSTN 240

Query: 241 SPLIDISDLQYMLANLEYCPLD 261
           SP+ID+S LQY L NLEYCPLD
Sbjct: 241 SPIIDVSGLQYTLTNLEYCPLD 259

[Close]
BLAST of CSPI05G06050 vs. NCBI nr
Match: gi|659073660|ref|XP_008437183.1| (PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo])

HSP 1 Score: 349.7 bits (896), Expect = 4.3e-93
Identity = 193/262 (73.66%), Postives = 218/262 (83.21%), Query Frame = 1 

Query: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILENNNNS--TVSPTLKNSRRK 60
           MDLNNVESPF FD LGDELLPLPSLSCIDNCFVPQFPSILENNNN+  TVSP  KN RRK
Sbjct: 1   MDLNNVESPFSFD-LGDELLPLPSLSCIDNCFVPQFPSILENNNNNSITVSPRPKNGRRK 60

Query: 61  KPVPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSI 120
           KP PANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSI
Sbjct: 61  KP-PANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSI 120

Query: 121 CDHMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARD 180
            DHM ETV YI++MQ +IQ+L DKRD+L++L +N     +  TETL S++RD VVVRA+D
Sbjct: 121 SDHMQETVSYIQHMQRRIQQLKDKRDKLREL-ANQTMVIIGTTETLNSSERDSVVVRAKD 180

Query: 181 GSGGIQVILDTPTQHRLPLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTN 240
           G  GIQV+LDT T+HRLPLS  ++AL+ +G EIL+C SN+LN+RF+HTIE Q  +  D  
Sbjct: 181 GI-GIQVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGC 240

Query: 241 SPLIDISDLQYMLANLEYCPLD 261
            P ID S LQ+ LANLEY PLD
Sbjct: 241 YPTIDASMLQHKLANLEYYPLD 258

[Close]
BLAST of CSPI05G06050 vs. NCBI nr
Match: gi|821595271|ref|NP_001295841.1| (transcription factor bHLH118-like [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 6.2e-68
Identity = 156/263 (59.32%), Postives = 191/263 (72.62%), Query Frame = 1 

Query: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILE-NNNNSTVSPTLKNSRRKK 60
           MDL+ ++SPF FD + DEL PLPSLS I        P I   NN N  +S   K  RR+K
Sbjct: 1   MDLDCIQSPFPFDQV-DELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRK 60

Query: 61  PVPANTSDDKDDEN-NSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSI 120
               NTS D +DEN N NEHKKKKI+HRDVERQRRQEMS+LY+ LRSLLP+EYLKGKRSI
Sbjct: 61  S--PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSI 120

Query: 121 CDHMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVET-ETLQSTKRDKVVVRAR 180
           CDHMHETVKYI++MQ+KIQ L +KRDELKK   + ++ G + T ETL S+KRD V+V  R
Sbjct: 121 CDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPR 180

Query: 181 DGSGGIQVILDTPTQHRLPLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDT 240
              GG+Q++LDT T HRLPLSN+++ LI Q  +I+SC S + NDRFLHTIE++ AV  +T
Sbjct: 181 -SCGGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVET 240

Query: 241 NSPLIDISDLQYMLANLEYCPLD 261
               ID+S+LQ  L NLEY PLD
Sbjct: 241 ----IDMSELQNKLTNLEYFPLD 255

[Close]
BLAST of CSPI05G06050 vs. NCBI nr
Match: gi|700194987|gb|KGN50164.1| (hypothetical protein Csa_5G157230 [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 1.4e-67
Identity = 155/263 (58.94%), Postives = 189/263 (71.86%), Query Frame = 1 

Query: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILE-NNNNSTVSPTLKNSRRKK 60
           MDL+ ++SPF FD + DEL PLPSLS I        P I   NN N  +S   K  RR+K
Sbjct: 1   MDLDCIQSPFPFDQV-DELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRK 60

Query: 61  PVPANTSDDKDDEN-NSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSI 120
               NTS D +DEN N NEHKKKKI+HRDVERQRRQEMS+LY+ LRSLLP+EYLKGKRSI
Sbjct: 61  S--PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSI 120

Query: 121 CDHMHETVKYIRYMQSKIQELCDKRDELKK-LQSNNQNPGMVETETLQSTKRDKVVVRAR 180
           CDHMHETVKYI++MQ+KIQ L +KRDELKK ++    +  +   ETL S+KRD V+V  R
Sbjct: 121 CDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPR 180

Query: 181 DGSGGIQVILDTPTQHRLPLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDT 240
              GG+Q++LDT T HRLPLSN+++ LI Q  +I+SC S + NDRFLHTIES+ AV  +T
Sbjct: 181 -SCGGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVET 240

Query: 241 NSPLIDISDLQYMLANLEYCPLD 261
               ID+S+LQ  L NLEY PLD
Sbjct: 241 ----IDMSELQNKLTNLEYFPLD 255

The following BLAST results are available for this feature:
BLAST of CSPI05G06050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH126_ARATH2.5e-2436.05Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1[more]
BH036_ARATH2.6e-2135.20Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1[more]
BH055_ARATH2.8e-2031.98Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1[more]
BH125_ARATH1.4e-1932.88Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125 PE=2 SV=1[more]
BH120_ARATH1.8e-1932.43Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2[more]
BLAST of CSPI05G06050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKN9_CUCSA7.7e-14299.62Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1[more]
A0A097IYP0_CUCSA4.3e-6859.32BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1[more]
A0A0A0KMQ4_CUCSA9.6e-6858.94Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1[more]
A0A097IYN6_CUCSA1.5e-6558.08BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1[more]
B9GKR8_POPTR9.7e-3645.81Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s08380g PE=4 SV=1[more]
BLAST of CSPI05G06050 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25410.11.4e-2536.05 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G51780.11.4e-2235.20 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G12540.11.6e-2131.98 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G62975.17.9e-2132.88 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G51790.11.0e-2032.43 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of CSPI05G06050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449459720|ref|XP_004147594.1|1.1e-14199.62PREDICTED: transcription factor bHLH36-like [Cucumis sativus][more]
gi|659073658|ref|XP_008437182.1|2.1e-12491.22PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo][more]
gi|659073660|ref|XP_008437183.1|4.3e-9373.66PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo][more]
gi|821595271|ref|NP_001295841.1|6.2e-6859.32transcription factor bHLH118-like [Cucumis sativus][more]
gi|700194987|gb|KGN50164.1|1.4e-6758.94hypothetical protein Csa_5G157230 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR015660MASH1/Ascl1a-like
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G06050.1CSPI05G06050.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 82..151
score: 1.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 82..133
score: 1.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 86..138
score: 1.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 80..132
score: 13
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 79..149
score: 3.14
IPR015660Achaete-scute transcription factor-relatedPANTHERPTHR13935ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATEDcoord: 37..248
score: 3.5
NoneNo IPR availablePANTHERPTHR13935:SF54TRANSCRIPTION FACTOR BHLH118-RELATEDcoord: 37..248
score: 3.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI05G06050MELO3C006854.2Melon (DHL92) v3.6.1cpimedB399
CSPI05G06050CmoCh15G012440Cucurbita moschata (Rifu)cmocpiB295
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G06050Watermelon (97103) v2cpiwmbB349
CSPI05G06050Watermelon (97103) v2cpiwmbB372
CSPI05G06050Watermelon (97103) v2cpiwmbB401
CSPI05G06050Watermelon (97103) v2cpiwmbB404
CSPI05G06050Watermelon (97103) v2cpiwmbB409
CSPI05G06050Wax gourdcpiwgoB440
CSPI05G06050Wax gourdcpiwgoB487
CSPI05G06050Wild cucumber (PI 183967)cpicpiB111
CSPI05G06050Wild cucumber (PI 183967)cpicpiB115
CSPI05G06050Wild cucumber (PI 183967)cpicpiB116
CSPI05G06050Cucumber (Gy14) v1cgycpiB386
CSPI05G06050Cucumber (Gy14) v1cgycpiB389
CSPI05G06050Cucumber (Gy14) v1cgycpiB457
CSPI05G06050Cucumber (Gy14) v1cgycpiB487
CSPI05G06050Cucumber (Gy14) v1cgycpiB539
CSPI05G06050Cucurbita maxima (Rimu)cmacpiB303
CSPI05G06050Cucurbita maxima (Rimu)cmacpiB614
CSPI05G06050Cucurbita maxima (Rimu)cmacpiB853
CSPI05G06050Cucurbita maxima (Rimu)cmacpiB854
CSPI05G06050Cucurbita moschata (Rifu)cmocpiB258
CSPI05G06050Cucurbita moschata (Rifu)cmocpiB416
CSPI05G06050Cucurbita moschata (Rifu)cmocpiB606
CSPI05G06050Cucurbita moschata (Rifu)cmocpiB836
CSPI05G06050Cucurbita moschata (Rifu)cmocpiB837
CSPI05G06050Cucumber (Chinese Long) v2cpicuB222
CSPI05G06050Cucumber (Chinese Long) v2cpicuB225
CSPI05G06050Cucumber (Chinese Long) v2cpicuB226
CSPI05G06050Cucumber (Chinese Long) v2cpicuB240
CSPI05G06050Melon (DHL92) v3.5.1cpimeB348
CSPI05G06050Melon (DHL92) v3.5.1cpimeB398
CSPI05G06050Melon (DHL92) v3.5.1cpimeB401
CSPI05G06050Melon (DHL92) v3.5.1cpimeB403
CSPI05G06050Watermelon (Charleston Gray)cpiwcgB368
CSPI05G06050Watermelon (Charleston Gray)cpiwcgB379
CSPI05G06050Watermelon (Charleston Gray)cpiwcgB414
CSPI05G06050Watermelon (97103) v1cpiwmB416
CSPI05G06050Watermelon (97103) v1cpiwmB412
CSPI05G06050Cucurbita pepo (Zucchini)cpecpiB040
CSPI05G06050Cucurbita pepo (Zucchini)cpecpiB176
CSPI05G06050Cucurbita pepo (Zucchini)cpecpiB625
CSPI05G06050Cucurbita pepo (Zucchini)cpecpiB738
CSPI05G06050Cucurbita pepo (Zucchini)cpecpiB874
CSPI05G06050Cucurbita pepo (Zucchini)cpecpiB875
CSPI05G06050Bottle gourd (USVL1VR-Ls)cpilsiB322
CSPI05G06050Bottle gourd (USVL1VR-Ls)cpilsiB379
CSPI05G06050Bottle gourd (USVL1VR-Ls)cpilsiB390
CSPI05G06050Bottle gourd (USVL1VR-Ls)cpilsiB383
CSPI05G06050Melon (DHL92) v3.6.1cpimedB338
CSPI05G06050Melon (DHL92) v3.6.1cpimedB396
CSPI05G06050Melon (DHL92) v3.6.1cpimedB398
CSPI05G06050Cucumber (Gy14) v2cgybcpiB127
CSPI05G06050Cucumber (Gy14) v2cgybcpiB130
CSPI05G06050Cucumber (Gy14) v2cgybcpiB131
CSPI05G06050Cucumber (Gy14) v2cgybcpiB226
CSPI05G06050Silver-seed gourdcarcpiB0526
CSPI05G06050Silver-seed gourdcarcpiB0652
CSPI05G06050Silver-seed gourdcarcpiB0902
CSPI05G06050Silver-seed gourdcarcpiB0961
CSPI05G06050Silver-seed gourdcarcpiB0977
CSPI05G06050Cucumber (Chinese Long) v3cpicucB269
CSPI05G06050Cucumber (Chinese Long) v3cpicucB262
CSPI05G06050Cucumber (Chinese Long) v3cpicucB268
CSPI05G06050Cucumber (Chinese Long) v3cpicucB285