CSPI04G10290 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACAAATATCACAATTCTTTCGAAATCACCAAGAAAATGAAGAGAGTTTCGATTTCAACAAGTCTTTGCCTATCGGTGCCTGTGATGGCAATGGTGATGGTGGTGGCGCTCATCACCGGAGCTGGACTGGCAGATGCAGTGAATTGTAATCCTATGGAGATGAGACCATGTCTTCCGGCATTGGAATCGTCAGTGCCGCCAACAGCTGAATGTTGTGAGAAATTGAAGGAGCAAGAGCCATGCTTTTGTGCATACCTCAAAAGTCCTGTATTTAAGCCTTATTTAGAATCTCCCAATGCTAAAAAGATTGCTACTTCTTGTCGCGTTCCTATACCCACCTGCTAG ATGAAGAGAGTTTCGATTTCAACAAGTCTTTGCCTATCGGTGCCTGTGATGGCAATGGTGATGGTGGTGGCGCTCATCACCGGAGCTGGACTGGCAGATGCAGTGAATTGTAATCCTATGGAGATGAGACCATGTCTTCCGGCATTGGAATCGTCAGTGCCGCCAACAGCTGAATGTTGTGAGAAATTGAAGGAGCAAGAGCCATGCTTTTGTGCATACCTCAAAAGTCCTGTATTTAAGCCTTATTTAGAATCTCCCAATGCTAAAAAGATTGCTACTTCTTGTCGCGTTCCTATACCCACCTGCTAG ATGAAGAGAGTTTCGATTTCAACAAGTCTTTGCCTATCGGTGCCTGTGATGGCAATGGTGATGGTGGTGGCGCTCATCACCGGAGCTGGACTGGCAGATGCAGTGAATTGTAATCCTATGGAGATGAGACCATGTCTTCCGGCATTGGAATCGTCAGTGCCGCCAACAGCTGAATGTTGTGAGAAATTGAAGGAGCAAGAGCCATGCTTTTGTGCATACCTCAAAAGTCCTGTATTTAAGCCTTATTTAGAATCTCCCAATGCTAAAAAGATTGCTACTTCTTGTCGCGTTCCTATACCCACCTGCTAG
BLAST of CSPI04G10290 vs. Swiss-Prot
Match: NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.4e-17 Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 1
BLAST of CSPI04G10290 vs. Swiss-Prot
Match: NLTP_VIGUN (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.3e-16 Identity = 40/99 (40.40%), Postives = 61/99 (61.62%), Query Frame = 1
BLAST of CSPI04G10290 vs. Swiss-Prot
Match: NLTP2_APIGA (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.6e-14 Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 1
BLAST of CSPI04G10290 vs. Swiss-Prot
Match: NLTPX_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=3 SV=2) HSP 1 Score: 72.8 bits (177), Expect = 2.5e-12 Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 1
BLAST of CSPI04G10290 vs. Swiss-Prot
Match: NLTPX_ORYSJ (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica GN=LTP-2 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 3.3e-12 Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 1
BLAST of CSPI04G10290 vs. TrEMBL
Match: A0A0A0KW09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141230 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 4.7e-50 Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 1
BLAST of CSPI04G10290 vs. TrEMBL
Match: A5JUZ7_SESIN (Lipid transfer protein OS=Sesamum indicum GN=LTP1 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.5e-21 Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1
BLAST of CSPI04G10290 vs. TrEMBL
Match: A0A0A0KW80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141210 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-20 Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 1
BLAST of CSPI04G10290 vs. TrEMBL
Match: B9H330_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09510g PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-20 Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 1
BLAST of CSPI04G10290 vs. TrEMBL
Match: A0A0D2TTY3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G057100 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.6e-20 Identity = 53/103 (51.46%), Postives = 69/103 (66.99%), Query Frame = 1
BLAST of CSPI04G10290 vs. TAIR10
Match: AT1G48750.1 (AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 94.0 bits (232), Expect = 5.9e-20 Identity = 38/89 (42.70%), Postives = 62/89 (69.66%), Query Frame = 1
BLAST of CSPI04G10290 vs. TAIR10
Match: AT3G18280.1 (AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 92.8 bits (229), Expect = 1.3e-19 Identity = 44/99 (44.44%), Postives = 70/99 (70.71%), Query Frame = 1
BLAST of CSPI04G10290 vs. TAIR10
Match: AT5G38170.1 (AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 83.2 bits (204), Expect = 1.0e-16 Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 1
BLAST of CSPI04G10290 vs. TAIR10
Match: AT1G73780.1 (AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 80.5 bits (197), Expect = 6.7e-16 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1
BLAST of CSPI04G10290 vs. TAIR10
Match: AT5G38160.1 (AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 78.2 bits (191), Expect = 3.3e-15 Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 1
BLAST of CSPI04G10290 vs. NCBI nr
Match: gi|700198657|gb|KGN53815.1| (hypothetical protein Csa_4G141230 [Cucumis sativus]) HSP 1 Score: 204.9 bits (520), Expect = 6.7e-50 Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 1
BLAST of CSPI04G10290 vs. NCBI nr
Match: gi|659086709|ref|XP_008444077.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo]) HSP 1 Score: 178.3 bits (451), Expect = 6.7e-42 Identity = 87/102 (85.29%), Postives = 94/102 (92.16%), Query Frame = 1
BLAST of CSPI04G10290 vs. NCBI nr
Match: gi|694439405|ref|XP_009346593.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Pyrus x bretschneideri]) HSP 1 Score: 117.9 bits (294), Expect = 1.1e-23 Identity = 56/102 (54.90%), Postives = 72/102 (70.59%), Query Frame = 1
BLAST of CSPI04G10290 vs. NCBI nr
Match: gi|747098318|ref|XP_011097163.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Sesamum indicum]) HSP 1 Score: 109.0 bits (271), Expect = 5.0e-21 Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1
BLAST of CSPI04G10290 vs. NCBI nr
Match: gi|659086707|ref|XP_008444076.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo]) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-20 Identity = 48/92 (52.17%), Postives = 66/92 (71.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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