CSPI03G42100 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G42100
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 36169010 .. 36169507 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAAGGTTGTGGGTAACTCTGCCAAGATGGTTGTTTTGCTTTTTCTTTTCACTCTCATGCTTTCCATCAATGGTAATTAATTACACCACTATTTATCAACCCTTTCCCCCACTCTTAATTTTTTTATCTCAAACAAAATTTTGGCGACAATAAAATTTTTAAATTATTGTTAAAAACAAACCACATAAGAAAGTACACATAAGTAAAAAGAAACTTATTTAATTTGTATACAGCATAATTTTTGTTTTTGTTTTCTTTTTCTCTTTTGTGGCTCACGGTGACCACAGAAAAGGGAGGGGGTGTGGAGGCAATGTTGTGTAAGGAGCGGAGCAAGACGTGGTCGGGATATTGCGCGATCACGAGCCATTGCAACAAACAATGCAAGAATTGGGAAGGTGCAGATCATGGAGCTTGCCACGATCACGTTCCTGGAAAGGCTTGTTATTGCTACTACAACTGTTGAAAACCATGCAATAATTCCTCATGAATTTTGA

mRNA sequence

ATGGGCAAGGTTGTGGGTAACTCTGCCAAGATGAAAAGGGAGGGGGTGTGGAGGCAATGTTGTGTAAGGAGCGGAGCAAGACGTGGTCGGGATATTGCGCGATCACGAGCCATTGCAACAAACAATGCAAGAATTGGGAAGGTGCAGATCATGGAGCTTGCCACGATCACGTTCCTGGAAAGGCTTGTTATTGCTACTACAACTGTTGAAAACCATGCAATAATTCCTCATGAATTTTGA

Coding sequence (CDS)

ATGGGCAAGGTTGTGGGTAACTCTGCCAAGATGAAAAGGGAGGGGGTGTGGAGGCAATGTTGTGTAAGGAGCGGAGCAAGACGTGGTCGGGATATTGCGCGATCACGAGCCATTGCAACAAACAATGCAAGAATTGGGAAGGTGCAGATCATGGAGCTTGCCACGATCACGTTCCTGGAAAGGCTTGTTATTGCTACTACAACTGTTGAAAACCATGCAATAATTCCTCATGAATTTTGA
Homology
[Close]
BLAST of CSPI03G42100 vs. TrEMBL
Match: A0A0A0LDM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G851930 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.5e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 11 MKREGVWRQCCVRSGARRGRDIARSRAIATNNARIGKVQIMELATITFLERLVIATTTVE 70
          MKREGVWRQCCVRSGARRGRDIARSRAIATNNARIGKVQIMELATITFLE+LVIATTTVE
Sbjct: 1  MKREGVWRQCCVRSGARRGRDIARSRAIATNNARIGKVQIMELATITFLEKLVIATTTVE 60

Query: 71 NHAIIPHEF 80
          NHAIIPHEF
Sbjct: 61 NHAIIPHEF 69

[Close]
BLAST of CSPI03G42100 vs. NCBI nr
Match: gi|700204760|gb|KGN59893.1| (hypothetical protein Csa_3G851930 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 5.1e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 11 MKREGVWRQCCVRSGARRGRDIARSRAIATNNARIGKVQIMELATITFLERLVIATTTVE 70
          MKREGVWRQCCVRSGARRGRDIARSRAIATNNARIGKVQIMELATITFLE+LVIATTTVE
Sbjct: 1  MKREGVWRQCCVRSGARRGRDIARSRAIATNNARIGKVQIMELATITFLEKLVIATTTVE 60

Query: 71 NHAIIPHEF 80
          NHAIIPHEF
Sbjct: 61 NHAIIPHEF 69

The following BLAST results are available for this feature:
BLAST of CSPI03G42100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G42100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDM9_CUCSA3.5e-2998.55Uncharacterized protein OS=Cucumis sativus GN=Csa_3G851930 PE=4 SV=1[more]
BLAST of CSPI03G42100 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G42100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204760|gb|KGN59893.1|5.1e-2998.55hypothetical protein Csa_3G851930 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G42100.1CSPI03G42100.1mRNA