CSPI02G13010 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTAGTTTCACTTTTAATTTTGGTTCTCTACACCAATAGAACAAGCAAGCTTTCCAATGGGGATTTATTTGCCATTCAGAATTCTTTTTGTCAAGCAAATTTTAAAAGTGCCATCAGGTTTCACCAAAAACCAGTTATCTGTCCCAAAAGGTCATGTAGTAGTTTACGTGGGAGAGATGCAAAAGAAACGATTTGTTGTTCCGATATCATATTTGAATCACCCTTCATTCCAACAACTGCTTAAATACGCTGAAGAAGAGTTTGGCTTCCAACATCCTCAAGGGGGTCTTACAATTCCTTGCAAGGAGGATACCTTCATTGATCTCACGTCTAGATTGCAAGTTTCTTAGACAATGAAGAGCGAAAGGGAAACTTATTGAGTTTTGACATTCTTTTTGTTCCTTGACTCATTTGTAAACTAATACTAAAATGTTTTAGGAAGTCCATTCCTTCCAGAATGTGAATGAATGGCATTGTCACGAGATTTTAAGTAATATATGATTAATTAAAATGCAGATATTTATAATTCATGATGTGT ATGGGGATTTATTTGCCATTCAGAATTCTTTTTGTCAAGCAAATTTTAAAAGTGCCATCAGGTTTCACCAAAAACCAGTTATCTGTCCCAAAAGGTCATGTAGTAGTTTACGTGGGAGAGATGCAAAAGAAACGATTTGTTGTTCCGATATCATATTTGAATCACCCTTCATTCCAACAACTGCTTAAATACGCTGAAGAAGAGTTTGGCTTCCAACATCCTCAAGGGGGTCTTACAATTCCTTGCAAGGAGGATACCTTCATTGATCTCACGTCTAGATTGCAAGTTTCTTAG ATGGGGATTTATTTGCCATTCAGAATTCTTTTTGTCAAGCAAATTTTAAAAGTGCCATCAGGTTTCACCAAAAACCAGTTATCTGTCCCAAAAGGTCATGTAGTAGTTTACGTGGGAGAGATGCAAAAGAAACGATTTGTTGTTCCGATATCATATTTGAATCACCCTTCATTCCAACAACTGCTTAAATACGCTGAAGAAGAGTTTGGCTTCCAACATCCTCAAGGGGGTCTTACAATTCCTTGCAAGGAGGATACCTTCATTGATCTCACGTCTAGATTGCAAGTTTCTTAG
BLAST of CSPI02G13010 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.1e-24 Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 1
BLAST of CSPI02G13010 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.7e-24 Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 1
BLAST of CSPI02G13010 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-23 Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 1
BLAST of CSPI02G13010 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-23 Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 1
BLAST of CSPI02G13010 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 6.6e-23 Identity = 48/68 (70.59%), Postives = 57/68 (83.82%), Query Frame = 1
BLAST of CSPI02G13010 vs. TrEMBL
Match: A0A0A0LPI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258770 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 8.4e-49 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1
BLAST of CSPI02G13010 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 5.3e-35 Identity = 73/97 (75.26%), Postives = 82/97 (84.54%), Query Frame = 1
BLAST of CSPI02G13010 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 6.9e-35 Identity = 74/97 (76.29%), Postives = 82/97 (84.54%), Query Frame = 1
BLAST of CSPI02G13010 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 5.8e-34 Identity = 72/97 (74.23%), Postives = 81/97 (83.51%), Query Frame = 1
BLAST of CSPI02G13010 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.7e-33 Identity = 74/97 (76.29%), Postives = 79/97 (81.44%), Query Frame = 1
BLAST of CSPI02G13010 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 116.7 bits (291), Expect = 8.1e-27 Identity = 56/86 (65.12%), Postives = 68/86 (79.07%), Query Frame = 1
BLAST of CSPI02G13010 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 114.8 bits (286), Expect = 3.1e-26 Identity = 60/93 (64.52%), Postives = 70/93 (75.27%), Query Frame = 1
BLAST of CSPI02G13010 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.8 bits (281), Expect = 1.2e-25 Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 1
BLAST of CSPI02G13010 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.5 bits (280), Expect = 1.5e-25 Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 1
BLAST of CSPI02G13010 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.1 bits (279), Expect = 2.0e-25 Identity = 56/97 (57.73%), Postives = 68/97 (70.10%), Query Frame = 1
BLAST of CSPI02G13010 vs. NCBI nr
Match: gi|778669597|ref|XP_011649276.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 200.7 bits (509), Expect = 1.2e-48 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1
BLAST of CSPI02G13010 vs. NCBI nr
Match: gi|659115598|ref|XP_008457636.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 199.1 bits (505), Expect = 3.5e-48 Identity = 95/97 (97.94%), Postives = 97/97 (100.00%), Query Frame = 1
BLAST of CSPI02G13010 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 164.1 bits (414), Expect = 1.2e-37 Identity = 79/97 (81.44%), Postives = 84/97 (86.60%), Query Frame = 1
BLAST of CSPI02G13010 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus]) HSP 1 Score: 154.8 bits (390), Expect = 7.6e-35 Identity = 73/97 (75.26%), Postives = 82/97 (84.54%), Query Frame = 1
BLAST of CSPI02G13010 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus]) HSP 1 Score: 154.5 bits (389), Expect = 9.9e-35 Identity = 74/97 (76.29%), Postives = 82/97 (84.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |