CSPI02G08490 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCCTTCCAACATTCGTTCAATAAATGACTCATGCCATTTCCTTCTCTTATTTCCCATCTCCAACCATGGCTTCCAAATCATGGTCATTTTTTGTCATCTGCCTTGCCTTTCTATTCTCTTCCGCGTTCGCTCAGGCCCCAGCACAGCCACCGAGCTTGCCAACCGTCTCTCCTCCCCCTACTACCCCACCTCCAACTGTAGCGACTTCTCCACCATTGTCAACACCACCACCTACTGTTGTTGCACCATCAACAAGTCCAACCATTCCACCACCACAAAGTTCACCTGTCTCCACCCCGTCGCTACCCCCTGCTTTGCCACCTCCACCCGCGACGCCTCCTCCATTGCCGCCTCCTTTACCACCACCGCAAGTCTCTCCGACTCCTTTGCCAACACCACCCGTACTAGCTCCCACCTTAGCACCATTACCATTACCGACTCCGCCAACACCAACACCTTCTCCACCAACCCCAGCACCTGTTGCGGCCCCAGAGCCATCCCCTGCACCCGCGCCGGGAAAGCATAAGCACAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCCCCGGCCCCTACCGTCCCAAGCCCACCGGCACCACCTACAGTGGTGGATTCACAAGATAGTACAGCCCCGGCACCATCACCAGATCTGGTAAAGCACGCCTTCATTATGTTTTTTTTTTTACATCTCTATGATTAAGGAGGTTACTTTTGATAAAAATTATTATATTGTAAAGTGAATTTCCATATCTGTAGCAAAAGAATTATTATATAATGTAAATAGGAAAATATAATTAATATATTGAAAAATTACGTAAATAGACAAAAAAAAAAAAAAAACAGCTAACTCTTAAATTTTATAAATGATAAATTCTAAGACACCCAATATAGTTCTATAAATGTTGGAATAGATTTGAAATTTATTATATTTAGGTATATTTTGCTAAATTATTATTATTATTATTATATATTTAAATTGGAAATTTGTGTTAATAGGATATTTTGTTTTATATACAGAATGGAGGAGACCCAATGAAAAGAAAGGTGGGAAGATGGAGTAAAGTTGGTTTGGGATTCATATTTCTAGTTGCTACCACTGGCTTCAATTTATAATTTTTTAAGAGAGAATTATTACCAAGGAATCCATCATGGTTCATAGTATTATAGAATTTGGCCCAGAATCTGAGAGATATATTTCATATATATCATTTTTTTAAAAAAATGGATTGTGTATTGGAATAATAATAATAATTTTTTATTTTATTTTATTTCATTTTTGTAATATAAACAATAATAATTTTCAAATGTGCTCCTGTTAGTCTCAATCCCAG ATGACTCATGCCATTTCCTTCTCTTATTTCCCATCTCCAACCATGGCTTCCAAATCATGGTCATTTTTTGTCATCTGCCTTGCCTTTCTATTCTCTTCCGCGTTCGCTCAGGCCCCAGCACAGCCACCGAGCTTGCCAACCGTCTCTCCTCCCCCTACTACCCCACCTCCAACTGTAGCGACTTCTCCACCATTGTCAACACCACCACCTACTGTTGTTGCACCATCAACAAGTCCAACCATTCCACCACCACAAAGTTCACCTGTCTCCACCCCGTCGCTACCCCCTGCTTTGCCACCTCCACCCGCGACGCCTCCTCCATTGCCGCCTCCTTTACCACCACCGCAAGTCTCTCCGACTCCTTTGCCAACACCACCCGTACTAGCTCCCACCTTAGCACCATTACCATTACCGACTCCGCCAACACCAACACCTTCTCCACCAACCCCAGCACCTGTTGCGGCCCCAGAGCCATCCCCTGCACCCGCGCCGGGAAAGCATAAGCACAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCCCCGGCCCCTACCGTCCCAAGCCCACCGGCACCACCTACAGTGGTGGATTCACAAGATAGTACAGCCCCGGCACCATCACCAGATCTGAATGGAGGAGACCCAATGAAAAGAAAGGTGGGAAGATGGAGTAAAGTTGGTTTGGGATTCATATTTCTAGTTGCTACCACTGGCTTCAATTTATAA ATGACTCATGCCATTTCCTTCTCTTATTTCCCATCTCCAACCATGGCTTCCAAATCATGGTCATTTTTTGTCATCTGCCTTGCCTTTCTATTCTCTTCCGCGTTCGCTCAGGCCCCAGCACAGCCACCGAGCTTGCCAACCGTCTCTCCTCCCCCTACTACCCCACCTCCAACTGTAGCGACTTCTCCACCATTGTCAACACCACCACCTACTGTTGTTGCACCATCAACAAGTCCAACCATTCCACCACCACAAAGTTCACCTGTCTCCACCCCGTCGCTACCCCCTGCTTTGCCACCTCCACCCGCGACGCCTCCTCCATTGCCGCCTCCTTTACCACCACCGCAAGTCTCTCCGACTCCTTTGCCAACACCACCCGTACTAGCTCCCACCTTAGCACCATTACCATTACCGACTCCGCCAACACCAACACCTTCTCCACCAACCCCAGCACCTGTTGCGGCCCCAGAGCCATCCCCTGCACCCGCGCCGGGAAAGCATAAGCACAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCCCCGGCCCCTACCGTCCCAAGCCCACCGGCACCACCTACAGTGGTGGATTCACAAGATAGTACAGCCCCGGCACCATCACCAGATCTGAATGGAGGAGACCCAATGAAAAGAAAGGTGGGAAGATGGAGTAAAGTTGGTTTGGGATTCATATTTCTAGTTGCTACCACTGGCTTCAATTTATAA
BLAST of CSPI02G08490 vs. Swiss-Prot
Match: AGP19_ARATH (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana GN=AGP19 PE=2 SV=2) HSP 1 Score: 95.9 bits (237), Expect = 6.5e-19 Identity = 106/214 (49.53%), Postives = 129/214 (60.28%), Query Frame = 1
BLAST of CSPI02G08490 vs. TrEMBL
Match: A0A0A0LHJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G115750 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 1.1e-113 Identity = 240/242 (99.17%), Postives = 242/242 (100.00%), Query Frame = 1
BLAST of CSPI02G08490 vs. TrEMBL
Match: A0A067FVG5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023867mg PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.4e-36 Identity = 142/280 (50.71%), Postives = 169/280 (60.36%), Query Frame = 1
BLAST of CSPI02G08490 vs. TrEMBL
Match: A0A061ECT3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_011899 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.4e-25 Identity = 121/265 (45.66%), Postives = 149/265 (56.23%), Query Frame = 1
BLAST of CSPI02G08490 vs. TrEMBL
Match: A9PG83_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s14250g PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 9.4e-25 Identity = 118/246 (47.97%), Postives = 144/246 (58.54%), Query Frame = 1
BLAST of CSPI02G08490 vs. TrEMBL
Match: A0A0S3T0Z7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G026400 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 9.4e-25 Identity = 127/275 (46.18%), Postives = 151/275 (54.91%), Query Frame = 1
BLAST of CSPI02G08490 vs. TAIR10
Match: AT1G68725.1 (AT1G68725.1 arabinogalactan protein 19) HSP 1 Score: 95.9 bits (237), Expect = 3.6e-20 Identity = 106/214 (49.53%), Postives = 129/214 (60.28%), Query Frame = 1
BLAST of CSPI02G08490 vs. NCBI nr
Match: gi|700206281|gb|KGN61400.1| (hypothetical protein Csa_2G115750 [Cucumis sativus]) HSP 1 Score: 417.5 bits (1072), Expect = 1.6e-113 Identity = 240/242 (99.17%), Postives = 242/242 (100.00%), Query Frame = 1
BLAST of CSPI02G08490 vs. NCBI nr
Match: gi|778668213|ref|XP_011649058.1| (PREDICTED: lysine-rich arabinogalactan protein 19-like [Cucumis sativus]) HSP 1 Score: 389.0 bits (998), Expect = 5.9e-105 Identity = 226/228 (99.12%), Postives = 228/228 (100.00%), Query Frame = 1
BLAST of CSPI02G08490 vs. NCBI nr
Match: gi|659114696|ref|XP_008457186.1| (PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo]) HSP 1 Score: 380.6 bits (976), Expect = 2.1e-102 Identity = 224/242 (92.56%), Postives = 228/242 (94.21%), Query Frame = 1
BLAST of CSPI02G08490 vs. NCBI nr
Match: gi|641851274|gb|KDO70145.1| (hypothetical protein CISIN_1g023867mg [Citrus sinensis]) HSP 1 Score: 161.4 bits (407), Expect = 2.0e-36 Identity = 142/280 (50.71%), Postives = 169/280 (60.36%), Query Frame = 1
BLAST of CSPI02G08490 vs. NCBI nr
Match: gi|568861793|ref|XP_006484384.1| (PREDICTED: lysine-rich arabinogalactan protein 19 [Citrus sinensis]) HSP 1 Score: 159.1 bits (401), Expect = 1.0e-35 Identity = 141/287 (49.13%), Postives = 169/287 (58.89%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |