CSPI02G03840 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATACCCTTCATGAATAAAGCAAAGCAATATTAACAGTACAAGCAAATCCAAAGATACCCCAATGGCAGAAGAAACAAAAAAAGAAAGTCTAAAGAAAGCAAGAACCTCAAATACTAATTATTTCTATTCAACACCTCGCCCATGCAGATTTGATGCCTTCTCCTTGACTCTGCAGCAGCACAATGGCCTTCGCCACCCCCAAACTTGGCCTCTTCCTCTGCGGTCTTGCCCATGGCTTCTTGCTTTTCGCGAGCTTAGTGCACTGTGATGGTTCACTCTCCCTCTTTCTCAATACACACACACACACACACAAACACAAGAGCTTCGTAGTTCCTAGTTTTTGATGGGTTCTTCTGTGCATTGAGATGGCTCTCTCTGTCTATTTCTCTGCTTCTAAACACTCTTACACACATAGTTCCATAGTTCCATATCTTTGCAGGGTTCTTTTGTAATCTCACAATTATAATTCTCCCTTATCCATAGACGTTATTTCCCTTATTGCTGCCGCACAAAACCTCACACCCAATTATCCATCATTTGCAGTGAATGAAGACACACTTTTCAAAGCCATGAACAAGTACAGAAGTTCCAAAGAACTTACACCCATGCATAGGAACTCAAAAGCAGACTGCCTCGTCAAGCAAATTGCTTGGGACTTAGACGATCAGTCGCCCCTCAGCATCTTCACCAGCGGCTCCCCCATTATTCCAACCAATTTAACCCAACTCCCCAATCTCCCGGACTACCTAACCAAGTGCAAAATCGAGCTCAACAACACGAGAAAAGGCTTGATTTTGCCCCTTCACATCCCCACGTTGGCGTTGAAACTTGTTCTTCATGGATGTACACATTCCCAGATGGACAATTACTTAAGCAAACCTGAATTCACGTCGATCGGAATTGGGTGTTATGAAGAATGGGCAGTTTTCGCTTTCGCCACCGATTCTCCCACCGGAAGCTTTAATTCTGCCGTGAAATTGTCTAAGTTGGGTCATCAGCATTTCTTCTTGGTGTCGTCCCTGTTGTTTGGGTTGTTTTTTCTTCTCTCCGGCTGAAGGGATATTTTCCATCCGAAACGACATGTCGATATCGTTTGGAAAATTTTAACTTTCAAGGCATGGTGGGACAATATTGCCCTTCGCTTCAATTTGTTAAAGATAAATACATTTTGGTCTCCGTTATTTATTTATTTTTCTTAATTTGTTTAATTTCAGCTCTTTTAGATTAATAAAAT ATGGCCTTCGCCACCCCCAAACTTGGCCTCTTCCTCTGCGGTCTTGCCCATGGCTTCTTGCTTTTCGCGAGCTTAGTGCACTGTGATGTGAATGAAGACACACTTTTCAAAGCCATGAACAAGTACAGAAGTTCCAAAGAACTTACACCCATGCATAGGAACTCAAAAGCAGACTGCCTCGTCAAGCAAATTGCTTGGGACTTAGACGATCAGTCGCCCCTCAGCATCTTCACCAGCGGCTCCCCCATTATTCCAACCAATTTAACCCAACTCCCCAATCTCCCGGACTACCTAACCAAGTGCAAAATCGAGCTCAACAACACGAGAAAAGGCTTGATTTTGCCCCTTCACATCCCCACGTTGGCGTTGAAACTTGTTCTTCATGGATGTACACATTCCCAGATGGACAATTACTTAAGCAAACCTGAATTCACGTCGATCGGAATTGGGTGTTATGAAGAATGGGCAGTTTTCGCTTTCGCCACCGATTCTCCCACCGGAAGCTTTAATTCTGCCGTGAAATTGTCTAAGTTGGGTCATCAGCATTTCTTCTTGGTGTCGTCCCTGTTGTTTGGGTTGTTTTTTCTTCTCTCCGGCTGA ATGGCCTTCGCCACCCCCAAACTTGGCCTCTTCCTCTGCGGTCTTGCCCATGGCTTCTTGCTTTTCGCGAGCTTAGTGCACTGTGATGTGAATGAAGACACACTTTTCAAAGCCATGAACAAGTACAGAAGTTCCAAAGAACTTACACCCATGCATAGGAACTCAAAAGCAGACTGCCTCGTCAAGCAAATTGCTTGGGACTTAGACGATCAGTCGCCCCTCAGCATCTTCACCAGCGGCTCCCCCATTATTCCAACCAATTTAACCCAACTCCCCAATCTCCCGGACTACCTAACCAAGTGCAAAATCGAGCTCAACAACACGAGAAAAGGCTTGATTTTGCCCCTTCACATCCCCACGTTGGCGTTGAAACTTGTTCTTCATGGATGTACACATTCCCAGATGGACAATTACTTAAGCAAACCTGAATTCACGTCGATCGGAATTGGGTGTTATGAAGAATGGGCAGTTTTCGCTTTCGCCACCGATTCTCCCACCGGAAGCTTTAATTCTGCCGTGAAATTGTCTAAGTTGGGTCATCAGCATTTCTTCTTGGTGTCGTCCCTGTTGTTTGGGTTGTTTTTTCTTCTCTCCGGCTGA
BLAST of CSPI02G03840 vs. Swiss-Prot
Match: UGPI3_ARATH (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana GN=At5g19250 PE=1 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 7.4e-19 Identity = 59/157 (37.58%), Postives = 79/157 (50.32%), Query Frame = 1
BLAST of CSPI02G03840 vs. Swiss-Prot
Match: UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana GN=At3g06035 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.1e-17 Identity = 53/160 (33.12%), Postives = 85/160 (53.12%), Query Frame = 1
BLAST of CSPI02G03840 vs. Swiss-Prot
Match: UGPI2_ARATH (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana GN=At5g19240 PE=2 SV=2) HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11 Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 1
BLAST of CSPI02G03840 vs. TrEMBL
Match: A0A0A0LIM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021650 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 2.0e-87 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 1
BLAST of CSPI02G03840 vs. TrEMBL
Match: A6YTC6_CUCME (GPI-anchored protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 1.1e-72 Identity = 139/161 (86.34%), Postives = 145/161 (90.06%), Query Frame = 1
BLAST of CSPI02G03840 vs. TrEMBL
Match: W9S359_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002452 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 4.1e-24 Identity = 62/159 (38.99%), Postives = 97/159 (61.01%), Query Frame = 1
BLAST of CSPI02G03840 vs. TrEMBL
Match: A0A0A0LGC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021640 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.6e-20 Identity = 59/157 (37.58%), Postives = 94/157 (59.87%), Query Frame = 1
BLAST of CSPI02G03840 vs. TrEMBL
Match: M5WK00_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011720mg PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 2.7e-20 Identity = 62/162 (38.27%), Postives = 97/162 (59.88%), Query Frame = 1
BLAST of CSPI02G03840 vs. TAIR10
Match: AT1G54860.1 (AT1G54860.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 98.2 bits (243), Expect = 4.9e-21 Identity = 52/140 (37.14%), Postives = 78/140 (55.71%), Query Frame = 1
BLAST of CSPI02G03840 vs. TAIR10
Match: AT5G19250.1 (AT5G19250.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 95.1 bits (235), Expect = 4.2e-20 Identity = 59/157 (37.58%), Postives = 79/157 (50.32%), Query Frame = 1
BLAST of CSPI02G03840 vs. TAIR10
Match: AT3G06035.1 (AT3G06035.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 91.3 bits (225), Expect = 6.0e-19 Identity = 53/160 (33.12%), Postives = 85/160 (53.12%), Query Frame = 1
BLAST of CSPI02G03840 vs. TAIR10
Match: AT5G19240.1 (AT5G19240.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12 Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 1
BLAST of CSPI02G03840 vs. NCBI nr
Match: gi|700205775|gb|KGN60894.1| (hypothetical protein Csa_2G021650 [Cucumis sativus]) HSP 1 Score: 329.7 bits (844), Expect = 2.8e-87 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 1
BLAST of CSPI02G03840 vs. NCBI nr
Match: gi|150036257|gb|ABR67420.1| (GPI-anchored protein-like protein [Cucumis melo subsp. melo]) HSP 1 Score: 280.8 bits (717), Expect = 1.5e-72 Identity = 139/161 (86.34%), Postives = 145/161 (90.06%), Query Frame = 1
BLAST of CSPI02G03840 vs. NCBI nr
Match: gi|659070382|ref|XP_008454803.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo]) HSP 1 Score: 280.8 bits (717), Expect = 1.5e-72 Identity = 139/161 (86.34%), Postives = 145/161 (90.06%), Query Frame = 1
BLAST of CSPI02G03840 vs. NCBI nr
Match: gi|703135332|ref|XP_010105845.1| (hypothetical protein L484_002452 [Morus notabilis]) HSP 1 Score: 119.4 bits (298), Expect = 5.8e-24 Identity = 62/159 (38.99%), Postives = 97/159 (61.01%), Query Frame = 1
BLAST of CSPI02G03840 vs. NCBI nr
Match: gi|659070380|ref|XP_008454795.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo]) HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23 Identity = 56/136 (41.18%), Postives = 86/136 (63.24%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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