CSPI02G03840.2 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G03840.2
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	GPI-anchored protein-like protein
Location	Chr2 : 2677421 .. 2678656 (+)
Sequence length	600

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATACCCTTCATGAATAAAGCAAAGCAATATTAACAGTACAAGCAAATCCAAAGATACCCCAATGGCAGAAGAAACAAAAAAAGAAAGTCTAAAGAAAGCAAGAACCTCAAATACTAATTATTTCTATTCAACACCTCGCCCATGCAGATTTGATGCCTTCTCCTTGACTCTGCAGCAGCACAATGGCCTTCGCCACCCCCAAACTTGGCCTCTTCCTCTGCGGTCTTGCCCATGGCTTCTTGCTTTTCGCGAGCTTAGTGCACTGTGATGGTTCACTCTCCCTCTTTCTCAATACACACACACACACACACAAACACAAGAGCTTCGTAGTTCCTAGTTTTTGATGGGTTCTTCTGTGCATTGAGATGGCTCTCTCTGTCTATTTCTCTGCTTCTAAACACTCTTACACACATAGTTCCATAGTTCCATATCTTTGCAGGGTTCTTTTGTAATCTCACAATTATAATTCTCCCTTATCCATAGACGTTATTTCCCTTATTGCTGCCGCACAAAACCTCACACCCAATTATCCATCATTTGCAGTGAATGAAGACACACTTTTCAAAGCCATGAACAAGTACAGAAGTTCCAAAGAACTTACACCCATGCATAGGAACTCAAAAGCAGACTGCCTCGTCAAGCAAATTGCTTGGGACTTAGACGATCAGTCGCCCCTCAGCATCTTCACCAGCGGCTCCCCCATTATTCCAACCAATTTAACCCAACTCCCCAATCTCCCGGACTACCTAACCAAGTGCAAAATCGAGCTCAACAACACGAGAAAAGGCTTGATTTTGCCCCTTCACATCCCCACGTTGGCGTTGAAACTTGTTCTTCATGGATGTACACATTCCCAGATGGACAATTACTTAAGCAAACCTGAATTCACGTCGATCGGAATTGGGTGTTATGAAGAATGGGCAGTTTTCGCTTTCGCCACCGATTCTCCCACCGGAAGCTTTAATTCTGCCGTGAAATTGTCTAAGTTGGGTCATCAGCATTTCTTCTTGGTGTCGTCCCTGTTGTTTGGGTTGTTTTTTCTTCTCTCCGGCTGAAGGGATATTTTCCATCCGAAACGACATGTCGATATCGTTTGGAAAATTTTAACTTTCAAGGCATGGTGGGACAATATTGCCCTTCGCTTCAATTTGTTAAAGATAAATACATTTTGGTCTCCGTTATTTATTTATTTTTCTTAATTTGTTTAATTTCAGCTCTTTTAGATTAATAAAAT

mRNA sequence

ATGGCCTTCGCCACCCCCAAACTTGGCCTCTTCCTCTGCGGTCTTGCCCATGGCTTCTTGCTTTTCGCGAGCTTAGTGCACTGTGATGTGAATGAAGACACACTTTTCAAAGCCATGAACAAGTACAGAAGTTCCAAAGAACTTACACCCATGCATAGGAACTCAAAAGCAGACTGCCTCGTCAAGCAAATTGCTTGGGACTTAGACGATCAGTCGCCCCTCAGCATCTTCACCAGCGGCTCCCCCATTATTCCAACCAATTTAACCCAACTCCCCAATCTCCCGGACTACCTAACCAAGTGCAAAATCGAGCTCAACAACACGAGAAAAGGCTTGATTTTGCCCCTTCACATCCCCACGTTGGCGTTGAAACTTGTTCTTCATGGATGTACACATTCCCAGATGGACAATTACTTAAGCAAACCTGAATTCACGTCGATCGGAATTGGGTGTTATGAAGAATGGGCAGTTTTCGCTTTCGCCACCGATTCTCCCACCGGAAGCTTTAATTCTGCCGTGAAATTGTCTAAGTTGGGTCATCAGCATTTCTTCTTGGTGTCGTCCCTGTTGTTTGGGTTGTTTTTTCTTCTCTCCGGCTGA

Coding sequence (CDS)

ATGGCCTTCGCCACCCCCAAACTTGGCCTCTTCCTCTGCGGTCTTGCCCATGGCTTCTTGCTTTTCGCGAGCTTAGTGCACTGTGATGTGAATGAAGACACACTTTTCAAAGCCATGAACAAGTACAGAAGTTCCAAAGAACTTACACCCATGCATAGGAACTCAAAAGCAGACTGCCTCGTCAAGCAAATTGCTTGGGACTTAGACGATCAGTCGCCCCTCAGCATCTTCACCAGCGGCTCCCCCATTATTCCAACCAATTTAACCCAACTCCCCAATCTCCCGGACTACCTAACCAAGTGCAAAATCGAGCTCAACAACACGAGAAAAGGCTTGATTTTGCCCCTTCACATCCCCACGTTGGCGTTGAAACTTGTTCTTCATGGATGTACACATTCCCAGATGGACAATTACTTAAGCAAACCTGAATTCACGTCGATCGGAATTGGGTGTTATGAAGAATGGGCAGTTTTCGCTTTCGCCACCGATTCTCCCACCGGAAGCTTTAATTCTGCCGTGAAATTGTCTAAGTTGGGTCATCAGCATTTCTTCTTGGTGTCGTCCCTGTTGTTTGGGTTGTTTTTTCTTCTCTCCGGCTGA

Homology

[Close]

BLAST of CSPI02G03840.2 vs. Swiss-Prot
Match: UGPI3_ARATH (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana GN=At5g19250 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.7e-21
Identity = 70/188 (37.23%), Postives = 90/188 (47.87%), Query Frame = 1


Query: 10  LFLCGLAHGFLLFASLVHCDV--NEDTLFKAMNKYRSSKELTPMHRNSKADCLVKQIAWD 69
           L L  L   FL    LV  D    ED L   +N YR+S  LT +  N  A+CL  +IA  
Sbjct: 6   LHLLFLLSVFLSLHPLVLSDTADEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQ 65

Query: 70  LDDQSPLSIFTSGSPIIPTNLTQLPNLPDYLTKCKIELNNTRKGLILPLHIPTLALKLVL 129
             +Q   +  T+GS  +P      PNLP+ L+KC++    TR G ILP  +P L   LVL
Sbjct: 66  FKNQPCTN--TTGSASVPGTTPGFPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVL 125

Query: 130 HGCTHSQMDNYLSKPEFTSIGIGCYEEWAVFAFATDSPTGSFNSAVKLSKLGHQHFFLVS 189
              T SQ    L+  +FT IGIG  + W V    T +P GS++ A            LVS
Sbjct: 126 TNFTMSQYSKDLNDSKFTGIGIGSDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVS 185

Query: 190 SLLFGLFF 196
           S L  L F
Sbjct: 186 SSLMFLLF 191

[Close]

BLAST of CSPI02G03840.2 vs. Swiss-Prot
Match: UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana GN=At3g06035 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-19
Identity = 62/187 (33.16%), Postives = 97/187 (51.87%), Query Frame = 1


Query: 20  LLFASLVHC-------DVNE-DTLFKAMNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQ 79
           LLF S++ C       D +E D L   +N YR+++ LT + +N  A+CL  +IA D    
Sbjct: 9   LLFLSILLCLNRPVLSDTDEEDILLTGINSYRTTQNLTILSKNENAECLADEIA-DQFKN 68

Query: 80  SPLSIFTSGSPIIPTNLTQLPNLPDYLTKCKIELNNTRKGLILPLHIPTLALKLVLHGCT 139
            P +  T GS  +P    Q  N P  L KC + +++TR G I+P  +P L   LVL   T
Sbjct: 69  KPCTNDT-GSATVPGTEPQFANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFT 128

Query: 140 HSQMDNYLSKPEFTSIGIGCYEEWAVFAFATDSPTGSFNSAVKLSKLGHQHFFLVSSLLF 199
            SQ    L+  +FT IGIG  ++W V    T++P GS+++A    +  +   F +  + +
Sbjct: 129 KSQYSMSLNDSKFTGIGIGKEDDWIVVVLTTNTPEGSYSTATPTKQESNGFTFGIGLVSY 188

[Close]

BLAST of CSPI02G03840.2 vs. Swiss-Prot
Match: UGPI2_ARATH (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana GN=At5g19240 PE=2 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 2.6e-13
Identity = 55/175 (31.43%), Postives = 85/175 (48.57%), Query Frame = 1


Query: 4   ATPKLGLFLCGLAHGFLLFASLVHCDVNEDTLFKAMNKYRSSKELTPMHRNSKADCLVKQ 63
           A  KL L L  L+    L   ++     E+ LF   N+YR S  LT + +N  A+CL  +
Sbjct: 2   AISKLHLVLFLLSVFLSLHRPVLSNTDGENLLFTVFNQYRESVNLTNLKKNKNAECLADE 61

Query: 64  IAWDLDDQSPLSIFTSGSPIIPTNLTQLPNLPDYLTKCKIELNNTRKGLIL----PLHIP 123
           +   L +Q   +  T+GS  +P     +PN P+ L KC++  N TR GLIL    P H  
Sbjct: 62  VVDQLQNQPCTN--TTGSASVPGTDPGIPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHS 121

Query: 124 TLALKLVLHGCTHSQMDNYLSKPEFTSIGIGCYEE--WAVFAFATDSPTGSFNSA 173
           T  L    +  T +     L+  +FT  G+G   +  W V    T++P GS++++
Sbjct: 122 TPDLSSFANVLTKN-----LNDSKFTGAGVGIDSDGIWLVTVLTTNTPGGSYSNS 169

[Close]

BLAST of CSPI02G03840.2 vs. TrEMBL
Match: A6YTC6_CUCME (GPI-anchored protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.0e-93
Identity = 173/199 (86.93%), Postives = 180/199 (90.45%), Query Frame = 1


Query: 1   MAFATPKLGLFLCGLAHGFLLFASLVHCDVNEDTLFKAMNKYRSSKELTPMHRNSKADCL 60
           MAF TPKLGL+LCGLAHG LL ASLVHCDVNEDTLFKAMN YRSSKELTPM+RNSKADC 
Sbjct: 209 MAFTTPKLGLYLCGLAHGLLLLASLVHCDVNEDTLFKAMNIYRSSKELTPMNRNSKADCF 268

Query: 61  VKQIAWDLDDQSPLSIFTSGSPIIPTNLTQLPNLPDYLTKCKIELNNTRKGLILPLHIPT 120
           VKQIAWD DDQ PLSIFTSGS I P+NLTQLPNLPDYLT+C IELNNT+ GLILPLHIPT
Sbjct: 269 VKQIAWDFDDQLPLSIFTSGSNITPSNLTQLPNLPDYLTRCNIELNNTKNGLILPLHIPT 328

Query: 121 LALKLVLHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVFAFATDSPTGSFNSAVKLSKLGH 180
           L   LVLHGCTHSQM NYLSKPEFTSIGIGCYE+WAVFAFATDSPTGSFNSAV LSKLG 
Sbjct: 329 LVSNLVLHGCTHSQMANYLSKPEFTSIGIGCYEQWAVFAFATDSPTGSFNSAVTLSKLGL 388

Query: 181 QHFFLVSSLLFGLFFLLSG 200
            HF+LVSSLLFGL FLLSG
Sbjct: 389 HHFYLVSSLLFGL-FLLSG 406

[Close]

BLAST of CSPI02G03840.2 vs. TrEMBL
Match: A0A0A0LIM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021650 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 1.9e-87
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 1


Query: 39  MNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSPLSIFTSGSPIIPTNLTQLPNLPDYL 98
           MNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSPLSIFTSGSPIIP+NLTQLPNLPDYL
Sbjct: 1   MNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSPLSIFTSGSPIIPSNLTQLPNLPDYL 60

Query: 99  TKCKIELNNTRKGLILPLHIPTLALKLVLHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVF 158
           TKCKIELNNTRKGLILPLHIPTLALKLVLHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVF
Sbjct: 61  TKCKIELNNTRKGLILPLHIPTLALKLVLHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVF 120

Query: 159 AFATDSPTGSFNSAVKLSKLGHQHFFLVSSLLFGLFFLLSG 200
           AFATDSPTGSFNSAVKLSKLGHQHFFLVSSLLFGLFFLLSG
Sbjct: 121 AFATDSPTGSFNSAVKLSKLGHQHFFLVSSLLFGLFFLLSG 161

[Close]

BLAST of CSPI02G03840.2 vs. TrEMBL
Match: W9S359_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002452 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.0e-29
Identity = 74/191 (38.74%), Postives = 113/191 (59.16%), Query Frame = 1


Query: 7   KLGLFLCGLAHGFLLFASLVHCDVNEDTLFKAMNKYRSSKELTPMHRNSKADCLVKQIAW 66
           KL L    L H FLL  + V  + +ED L + +N YR S+ L P+ +N KA+CL  +IA 
Sbjct: 5   KLSLLFFVLLHAFLLLPNSVLSNDDEDNLLQGLNSYRQSQRLPPLVKNGKAECLADEIAD 64

Query: 67  DLDDQSPLSIFTSGSPIIPTNLTQLPNLPDYLTKCKIELNNTRKGLILPLHIPTLALKLV 126
           +++DQ P + F +G+ I P+  TQL N P  L KCKI+ N T  G+ILP+ +  L   L+
Sbjct: 65  EMEDQ-PCTTFAAGANIAPSTQTQLTNYPKLLKKCKIDANTTSDGVILPVCVSNLVPTLL 124

Query: 127 LHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVFAFATDSPTGSFNSAVKL-SKLGHQHFFL 186
           L   TH+    YL+  ++T  G+G  ++W V   +T +PTGSF+ ++ L S +G  H+  
Sbjct: 125 LTNYTHTSYAKYLNNTKYTGAGLGSEDDWMVVVLSTSTPTGSFSGSLSLVSMMGFGHY-- 184

Query: 187 VSSLLFGLFFL 197
              L++GL+ L
Sbjct: 185 ---LVWGLWSL 189

[Close]

BLAST of CSPI02G03840.2 vs. TrEMBL
Match: A0A0A0LGC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021640 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.7e-28
Identity = 74/190 (38.95%), Postives = 111/190 (58.42%), Query Frame = 1


Query: 7   KLGLFLCGLAHGFLLFASLVHCDVNEDTLFKAMNKYRSSKELTPMHRNSKADCLVKQIAW 66
           K  L LC L H  L     VHCDV+ + LFK  N YR+SK+ + + +NSKA C+ +QIA 
Sbjct: 5   KCCLSLCALLHCLLPLLHSVHCDVDLEELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAK 64

Query: 67  DLDDQSPLSIFTSGSPIIPTNLTQLPNLPDYLTKCKIELNNTRKGLILPLHIPTLALKLV 126
           +  ++ P S    G  ++P N +QLP +  Y  KC++ LN+T  G+ILP+++P  A KL+
Sbjct: 65  NWYNKLPCSAAIEGDVLLPFNQSQLP-MSHYSRKCEVNLNHTVDGVILPVYVPNSADKLM 124

Query: 127 LHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVFAFATDSPTGSFNSAVKL-SKLGHQH--- 186
           L  CTHSQ   YL    +T +G+   E+  V A  TD+ +GS+++ + L   +G  +   
Sbjct: 125 LTNCTHSQAPKYLDNATYTRVGLATNEDCLVIALGTDAISGSYSAGLSLVPHIGWVYWLG 184

Query: 187 FFLVSSLLFG 193
           F  +S L FG
Sbjct: 185 FLFLSILCFG 193

[Close]

BLAST of CSPI02G03840.2 vs. TrEMBL
Match: M5WK00_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011720mg PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-25
Identity = 74/195 (37.95%), Postives = 114/195 (58.46%), Query Frame = 1


Query: 7   KLGLFLCGLAHGFLLFASLVH-CDVNEDTLFKAMNKYRSSKELTPMHRNSKADCLVKQIA 66
           +L  F   L H FLL +  VH  D ++D L + +N YR S  L  + +N  A CL  +IA
Sbjct: 6   RLSFFFFVLFHAFLLLSPFVHGSDEDDDNLLQGINSYRRSLNLPVLIKNDNAGCLADRIA 65

Query: 67  WDLDDQSPLSIFTSGSPIIPTNLTQLPNLPDYLTKCKIELNNTRKGLILPLHIPTLALKL 126
            D++D  P S  T+G+ I+P++ + L NLP +L KCKI+ N+T+ G+ILP+ +P L   L
Sbjct: 66  DDIEDL-PCSSPTNGANILPSSQSPLANLPKHLRKCKIDANSTQDGVILPVCVPKLVPTL 125

Query: 127 VLHGCTHS-QMDNYLSKPEFTSIGIGCYEEWAVFAFATDSPTGSFNSAV--KLSKLGHQH 186
           VL   THS +   YL+   F+ +G+G  + WAV   A+ +P+G+F +A    +S  G  H
Sbjct: 126 VLTNYTHSPKYVKYLNDSRFSGVGVGSEDNWAVVVLASSNPSGNFANAAGSLVSMFGFGH 185

Query: 187 FFLVSSLLFGLFFLL 198
           + +   LL G+  +L
Sbjct: 186 YLVF--LLLGVSLIL 197

[Close]

BLAST of CSPI02G03840.2 vs. TAIR10
Match: AT1G54860.1 (AT1G54860.1 Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-23
Identity = 58/160 (36.25%), Postives = 88/160 (55.00%), Query Frame = 1


Query: 19  FLLFASLVHCDVNEDTLFKAMNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSPLSIFT 78
           F L ++ V  +  ED L + +N YR+++ + P  +N KADC+  +IA  L+DQ P +  T
Sbjct: 19  FSLISTCVVSNQAEDNLLQGLNSYRTAQRVPPFAKNEKADCVADEIADKLEDQ-PCTNHT 78

Query: 79  SGSPIIPTNL-TQLPNLPDYLTKCKIELNNTRKGLILPLHIPTLALKLVLHGCTHSQMDN 138
           + S + P ++  +L N  D L++CKI+ N TR GLILP+ IP     L L   T +    
Sbjct: 79  TASTVTPGSVPPRLTNYQDILSECKIDPNTTRDGLILPVCIPNRIPTLALTNYTQTGYAR 138

Query: 139 YLSKPEFTSIGIGCYEEWAVFAFATDSPTGSFNSAVKLSK 178
           YL+   +   G+G  +EW V    T +P GSF + V   K
Sbjct: 139 YLNDSRYVGAGVGSEKEWMVVVLTTSTPGGSFTAGVAAGK 177

[Close]

BLAST of CSPI02G03840.2 vs. TAIR10
Match: AT5G19250.1 (AT5G19250.1 Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 101.7 bits (252), Expect = 5.5e-22
Identity = 70/188 (37.23%), Postives = 90/188 (47.87%), Query Frame = 1


Query: 10  LFLCGLAHGFLLFASLVHCDV--NEDTLFKAMNKYRSSKELTPMHRNSKADCLVKQIAWD 69
           L L  L   FL    LV  D    ED L   +N YR+S  LT +  N  A+CL  +IA  
Sbjct: 6   LHLLFLLSVFLSLHPLVLSDTADEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQ 65

Query: 70  LDDQSPLSIFTSGSPIIPTNLTQLPNLPDYLTKCKIELNNTRKGLILPLHIPTLALKLVL 129
             +Q   +  T+GS  +P      PNLP+ L+KC++    TR G ILP  +P L   LVL
Sbjct: 66  FKNQPCTN--TTGSASVPGTTPGFPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVL 125

Query: 130 HGCTHSQMDNYLSKPEFTSIGIGCYEEWAVFAFATDSPTGSFNSAVKLSKLGHQHFFLVS 189
              T SQ    L+  +FT IGIG  + W V    T +P GS++ A            LVS
Sbjct: 126 TNFTMSQYSKDLNDSKFTGIGIGSDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVS 185

Query: 190 SLLFGLFF 196
           S L  L F
Sbjct: 186 SSLMFLLF 191

[Close]

BLAST of CSPI02G03840.2 vs. TAIR10
Match: AT3G06035.1 (AT3G06035.1 Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 98.2 bits (243), Expect = 6.1e-21
Identity = 62/187 (33.16%), Postives = 97/187 (51.87%), Query Frame = 1


Query: 20  LLFASLVHC-------DVNE-DTLFKAMNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQ 79
           LLF S++ C       D +E D L   +N YR+++ LT + +N  A+CL  +IA D    
Sbjct: 9   LLFLSILLCLNRPVLSDTDEEDILLTGINSYRTTQNLTILSKNENAECLADEIA-DQFKN 68

Query: 80  SPLSIFTSGSPIIPTNLTQLPNLPDYLTKCKIELNNTRKGLILPLHIPTLALKLVLHGCT 139
            P +  T GS  +P    Q  N P  L KC + +++TR G I+P  +P L   LVL   T
Sbjct: 69  KPCTNDT-GSATVPGTEPQFANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFT 128

Query: 140 HSQMDNYLSKPEFTSIGIGCYEEWAVFAFATDSPTGSFNSAVKLSKLGHQHFFLVSSLLF 199
            SQ    L+  +FT IGIG  ++W V    T++P GS+++A    +  +   F +  + +
Sbjct: 129 KSQYSMSLNDSKFTGIGIGKEDDWIVVVLTTNTPEGSYSTATPTKQESNGFTFGIGLVSY 188

[Close]

BLAST of CSPI02G03840.2 vs. TAIR10
Match: AT5G19240.1 (AT5G19240.1 Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-14
Identity = 55/175 (31.43%), Postives = 85/175 (48.57%), Query Frame = 1


Query: 4   ATPKLGLFLCGLAHGFLLFASLVHCDVNEDTLFKAMNKYRSSKELTPMHRNSKADCLVKQ 63
           A  KL L L  L+    L   ++     E+ LF   N+YR S  LT + +N  A+CL  +
Sbjct: 2   AISKLHLVLFLLSVFLSLHRPVLSNTDGENLLFTVFNQYRESVNLTNLKKNKNAECLADE 61

Query: 64  IAWDLDDQSPLSIFTSGSPIIPTNLTQLPNLPDYLTKCKIELNNTRKGLIL----PLHIP 123
           +   L +Q   +  T+GS  +P     +PN P+ L KC++  N TR GLIL    P H  
Sbjct: 62  VVDQLQNQPCTN--TTGSASVPGTDPGIPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHS 121

Query: 124 TLALKLVLHGCTHSQMDNYLSKPEFTSIGIGCYEE--WAVFAFATDSPTGSFNSA 173
           T  L    +  T +     L+  +FT  G+G   +  W V    T++P GS++++
Sbjct: 122 TPDLSSFANVLTKN-----LNDSKFTGAGVGIDSDGIWLVTVLTTNTPGGSYSNS 169

[Close]

BLAST of CSPI02G03840.2 vs. NCBI nr
Match: gi|150036257|gb|ABR67420.1| (GPI-anchored protein-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 350.9 bits (899), Expect = 1.5e-93
Identity = 173/199 (86.93%), Postives = 180/199 (90.45%), Query Frame = 1


Query: 1   MAFATPKLGLFLCGLAHGFLLFASLVHCDVNEDTLFKAMNKYRSSKELTPMHRNSKADCL 60
           MAF TPKLGL+LCGLAHG LL ASLVHCDVNEDTLFKAMN YRSSKELTPM+RNSKADC 
Sbjct: 209 MAFTTPKLGLYLCGLAHGLLLLASLVHCDVNEDTLFKAMNIYRSSKELTPMNRNSKADCF 268

Query: 61  VKQIAWDLDDQSPLSIFTSGSPIIPTNLTQLPNLPDYLTKCKIELNNTRKGLILPLHIPT 120
           VKQIAWD DDQ PLSIFTSGS I P+NLTQLPNLPDYLT+C IELNNT+ GLILPLHIPT
Sbjct: 269 VKQIAWDFDDQLPLSIFTSGSNITPSNLTQLPNLPDYLTRCNIELNNTKNGLILPLHIPT 328

Query: 121 LALKLVLHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVFAFATDSPTGSFNSAVKLSKLGH 180
           L   LVLHGCTHSQM NYLSKPEFTSIGIGCYE+WAVFAFATDSPTGSFNSAV LSKLG 
Sbjct: 329 LVSNLVLHGCTHSQMANYLSKPEFTSIGIGCYEQWAVFAFATDSPTGSFNSAVTLSKLGL 388

Query: 181 QHFFLVSSLLFGLFFLLSG 200
            HF+LVSSLLFGL FLLSG
Sbjct: 389 HHFYLVSSLLFGL-FLLSG 406

[Close]

BLAST of CSPI02G03840.2 vs. NCBI nr
Match: gi|659070382|ref|XP_008454803.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo])

HSP 1 Score: 350.9 bits (899), Expect = 1.5e-93
Identity = 173/199 (86.93%), Postives = 180/199 (90.45%), Query Frame = 1


Query: 1   MAFATPKLGLFLCGLAHGFLLFASLVHCDVNEDTLFKAMNKYRSSKELTPMHRNSKADCL 60
           MAF TPKLGL+LCGLAHG LL ASLVHCDVNEDTLFKAMN YRSSKELTPM+RNSKADC 
Sbjct: 42  MAFTTPKLGLYLCGLAHGLLLLASLVHCDVNEDTLFKAMNIYRSSKELTPMNRNSKADCF 101

Query: 61  VKQIAWDLDDQSPLSIFTSGSPIIPTNLTQLPNLPDYLTKCKIELNNTRKGLILPLHIPT 120
           VKQIAWD DDQ PLSIFTSGS I P+NLTQLPNLPDYLT+C IELNNT+ GLILPLHIPT
Sbjct: 102 VKQIAWDFDDQLPLSIFTSGSNITPSNLTQLPNLPDYLTRCNIELNNTKNGLILPLHIPT 161

Query: 121 LALKLVLHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVFAFATDSPTGSFNSAVKLSKLGH 180
           L   LVLHGCTHSQM NYLSKPEFTSIGIGCYE+WAVFAFATDSPTGSFNSAV LSKLG 
Sbjct: 162 LVSNLVLHGCTHSQMANYLSKPEFTSIGIGCYEQWAVFAFATDSPTGSFNSAVTLSKLGL 221

Query: 181 QHFFLVSSLLFGLFFLLSG 200
            HF+LVSSLLFGL FLLSG
Sbjct: 222 HHFYLVSSLLFGL-FLLSG 239

[Close]

BLAST of CSPI02G03840.2 vs. NCBI nr
Match: gi|700205775|gb|KGN60894.1| (hypothetical protein Csa_2G021650 [Cucumis sativus])

HSP 1 Score: 330.1 bits (845), Expect = 2.7e-87
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 1


Query: 39  MNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSPLSIFTSGSPIIPTNLTQLPNLPDYL 98
           MNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSPLSIFTSGSPIIP+NLTQLPNLPDYL
Sbjct: 1   MNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSPLSIFTSGSPIIPSNLTQLPNLPDYL 60

Query: 99  TKCKIELNNTRKGLILPLHIPTLALKLVLHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVF 158
           TKCKIELNNTRKGLILPLHIPTLALKLVLHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVF
Sbjct: 61  TKCKIELNNTRKGLILPLHIPTLALKLVLHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVF 120

Query: 159 AFATDSPTGSFNSAVKLSKLGHQHFFLVSSLLFGLFFLLSG 200
           AFATDSPTGSFNSAVKLSKLGHQHFFLVSSLLFGLFFLLSG
Sbjct: 121 AFATDSPTGSFNSAVKLSKLGHQHFFLVSSLLFGLFFLLSG 161

[Close]

BLAST of CSPI02G03840.2 vs. NCBI nr
Match: gi|659070380|ref|XP_008454795.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo])

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31
Identity = 75/175 (42.86%), Postives = 107/175 (61.14%), Query Frame = 1


Query: 1   MAFATPKLGLFLCGLAHGFLLFASLVHCDVNEDTLFKAMNKYRSSKELTPMHRNSKADCL 60
           MAF   K  L LC L H  L    LVHCDV+ + LFK  N YR+SK+ + + +NSKA C+
Sbjct: 1   MAFL--KCFLSLCALLHCLLPLLHLVHCDVDLEELFKGFNIYRNSKDRSALAQNSKAKCI 60

Query: 61  VKQIAWDLDDQSPLSIFTSGSPIIPTNLTQLPNLPDYLTKCKIELNNTRKGLILPLHIPT 120
            +QIA +   Q P S    G  ++P+N +QLP   +Y  KC++ LN+T  G+ILP+H+P 
Sbjct: 61  AEQIAKNWYSQLPCSAAIEGDVLLPSNQSQLPLFTEYSRKCEVNLNHTVDGVILPVHVPN 120

Query: 121 LALKLVLHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVFAFATDSPTGSFNSAVKL 176
            A KL+L  CTHSQ   YL    +TS+G+   E+  V A  TD+ +GS+++ + L
Sbjct: 121 SADKLMLTNCTHSQAPKYLDNATYTSVGLATNEDCLVIALGTDAISGSYSAGLSL 173

[Close]

BLAST of CSPI02G03840.2 vs. NCBI nr
Match: gi|703135332|ref|XP_010105845.1| (hypothetical protein L484_002452 [Morus notabilis])

HSP 1 Score: 136.7 bits (343), Expect = 4.4e-29
Identity = 74/191 (38.74%), Postives = 113/191 (59.16%), Query Frame = 1


Query: 7   KLGLFLCGLAHGFLLFASLVHCDVNEDTLFKAMNKYRSSKELTPMHRNSKADCLVKQIAW 66
           KL L    L H FLL  + V  + +ED L + +N YR S+ L P+ +N KA+CL  +IA 
Sbjct: 5   KLSLLFFVLLHAFLLLPNSVLSNDDEDNLLQGLNSYRQSQRLPPLVKNGKAECLADEIAD 64

Query: 67  DLDDQSPLSIFTSGSPIIPTNLTQLPNLPDYLTKCKIELNNTRKGLILPLHIPTLALKLV 126
           +++DQ P + F +G+ I P+  TQL N P  L KCKI+ N T  G+ILP+ +  L   L+
Sbjct: 65  EMEDQ-PCTTFAAGANIAPSTQTQLTNYPKLLKKCKIDANTTSDGVILPVCVSNLVPTLL 124

Query: 127 LHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVFAFATDSPTGSFNSAVKL-SKLGHQHFFL 186
           L   TH+    YL+  ++T  G+G  ++W V   +T +PTGSF+ ++ L S +G  H+  
Sbjct: 125 LTNYTHTSYAKYLNNTKYTGAGLGSEDDWMVVVLSTSTPTGSFSGSLSLVSMMGFGHY-- 184

Query: 187 VSSLLFGLFFL 197
              L++GL+ L
Sbjct: 185 ---LVWGLWSL 189

The following BLAST results are available for this feature:

BLAST of CSPI02G03840.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UGPI3_ARATH	9.7e-21	37.23	Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana GN=At5g19...	[more]
UGPI4_ARATH	1.1e-19	33.16	Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana GN=At3g06...	[more]
UGPI2_ARATH	2.6e-13	31.43	Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana GN=At5g19...	[more]

BLAST of CSPI02G03840.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A6YTC6_CUCME	1.0e-93	86.93	GPI-anchored protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0LIM2_CUCSA	1.9e-87	99.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021650 PE=4 SV=1	[more]
W9S359_9ROSA	3.0e-29	38.74	Uncharacterized protein OS=Morus notabilis GN=L484_002452 PE=4 SV=1	[more]
A0A0A0LGC0_CUCSA	5.7e-28	38.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021640 PE=4 SV=1	[more]
M5WK00_PRUPE	1.2e-25	37.95	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011720mg PE=4 SV=1	[more]

BLAST of CSPI02G03840.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54860.1	1.7e-23	36.25	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19250.1	5.5e-22	37.23	Glycoprotein membrane precursor GPI-anchored	[more]
AT3G06035.1	6.1e-21	33.16	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19240.1	1.4e-14	31.43	Glycoprotein membrane precursor GPI-anchored	[more]

BLAST of CSPI02G03840.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|150036257\|gb\|ABR67420.1\|	1.5e-93	86.93	GPI-anchored protein-like protein [Cucumis melo subsp. melo]	[more]
gi\|659070382\|ref\|XP_008454803.1\|	1.5e-93	86.93	PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo]	[more]
gi\|700205775\|gb\|KGN60894.1\|	2.7e-87	99.38	hypothetical protein Csa_2G021650 [Cucumis sativus]	[more]
gi\|659070380\|ref\|XP_008454795.1\|	1.2e-31	42.86	PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo]	[more]
gi\|703135332\|ref\|XP_010105845.1\|	4.4e-29	38.74	hypothetical protein L484_002452 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI02G03840	CSPI02G03840	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI02G03840.2	CSPI02G03840.2-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI02G03840.2.utr5p1	CSPI02G03840.2.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI02G03840.2.cds1	CSPI02G03840.2.cds1	CDS
CSPI02G03840.2.cds2	CSPI02G03840.2.cds2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI02G03840.2.utr3p1	CSPI02G03840.2.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRODOM	PD208950		coord: 19..177 score: 3.0
None	No IPR available	PANTHER	PTHR33976	FAMILY NOT NAMED	coord: 4..198 score: 1.2