CSPI01G25330 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACACCACTCTCATCTTCATCCATATCTCTACTCTCTTACTATCCAAGTTAACCTCTTGAAATGGTTTCCTCAGAGCTTGAAGCAAGAGAGAACTCGGAAACAAAAGAGAAATATGGTCATTGCTTGAGTTATATTTTGCCAACAACTGGAGATCATGAGGTGCACTGGCCCTCCCCCTCTGAGCTCTATAAACAACTTTGTGATGGGACTTCCCTCAACAATGGATCTAAGGCAAGTGTAACATTATTTTTAATTTCTTTTAGAGTATTATATAGTTGATATTAGAAGGACTTATAAAAGAGTTAAAAAGATATGATTATGAGTGATTTTGTAAAGACTAAAATCACTCATTTCAACTTGTCTCAAATCACTTTTCTTCTAAAATTGTGTTTGTTCTATTTCTAAATTTCTTCTTTACATCTAATAATCTTAACTTCCATGCATATGCATGTAATTGTTTTTAATCTAAATTTCTTTTAGTAATTGGATGATTCTACAACTAACATTAAAAACAAAAAAACATTAGTCCTTGAAAAAATTATTTCAATTGATCATACATGGAACAAAACTATTTCTACAAGTATCAAACCAAATATTTACTAGAAAAAAAAATACTTAGTTAAAAGTATAGAACCAAATATTAAAATGATTCTCGAACAAATCTTGATATTAGCGTTCAATTTTTTTTACATAGAAATAAACTTAAAACACAAAAGATATGGAAATTTCTTTTTTGTTATTATTATTATTATTTATCTTTAATTAAAATTTGTTAAAGAGTTGAGTATGATTAGTTTGTATGCAGATTTATTGGTTTCATAGGAAGGGAAGGGGTAATGCCTACTTCATATTTCCAAAAGCTATCTCAATAGCTTGGATCAATGAATGTCAGTACTGGAGATGGATATCTATCGACATCTTTGGGTATACTTATTTTTTCTAACCGCATTAAATATCGTCTTCGTTTCTATATTTTGAAATATCAATTTTCTAATATAACAAAATGTCACAATTTACAACATTCATTTAATTTGCTATATATTTATTTGTAAGTTAGTTAACTTAGTTGATTATATTTGAAAGCAGGTTATTAGTTCTTTCTCCTTTCAATAAGTTTTAATCCATATTGTTAGTTTATGGTTGATTTTACATAAATAAATAAACTCTTTGTTATGTATAAACAATATTAATTTTCCCATAAATTTAGAAAACACATATTCATGTAAGCTACATTTAAGATTTATTATGGAAAGTAGTTTATTAAAATTAAACAAAATTTAAATTACGAGAACAACATTTGAATTGGTTTTCTTTTTCTTTTTCTTTTTTTATGTGTTGAAAAATGAAATGATGAATTATGGAAGGTATATACTGAGATAAAAAAAATGAAAAAATAAAACACAAAAGAAGAGATAGATTAGGTTTGAATGAATGAACTTTAATCTTCATTATTTATTTACTAATCAAAATTAAAAGGGTTGTTTGGATGTAATTTTGTGAAATGGTTTTACCGAACAAAGTAGATTAAATTAGTCTCTATGATTTGATAAATGTTTCATTAATGAAACTACTTTCTAAAAATTGACAAGATTAAATTGAACTTAACTTTCTGTGAAACCATAGAGATGAATACGAGGTTTAAAAAATATAATAAGTAGTTTTTTTTAAGTAGTCGGTCATTATTTTAAAAGTTGTTTATTTGTTGATGATGGTGTAAAAAAACTTTGGCAGTAAGAAAATTGACGTGGCTGAGCTTGTAAAAGTTCGTTGGCTAGATGTACGTGTAAGGATCAAGGAATATATGCTATCAGCTGGCGTTACATATGAACTATTATGTCATCTTTTGTTAAAGTCGTGTGCATCGGGATGGCATGAACCTATTAACTTTGGACTCACCTTGCCAAATGGGACAAAATTTGTGAACAGTGAAAGCCTAGAATGTAAGCCACGAGATGTTTGGTTTACGATCAAGGTCGAGGAATTCAAGATTGGCGATAAACATGGTTGTTTGAATGCTAAGGAGTACGAGTTTAGCATGTATAACCACAATCAACATTGGAAGTCGGGATTGATCTTTAAAAGTTTTGAAATTCGACCAAAGCAACCATGTTGCAAAAGCTAAGAATATGAATCTCTAAGTTTGTCTCACTCCAACTACCCTACTTGTAGTTTGGTTTAAATAAATGAGAGAGGTATACTATACTCTAGTTTGTTTTATAATATAAACGACGGTATCAGAATGTAATAG ATGGTTTCCTCAGAGCTTGAAGCAAGAGAGAACTCGGAAACAAAAGAGAAATATGGTCATTGCTTGAGTTATATTTTGCCAACAACTGGAGATCATGAGGTGCACTGGCCCTCCCCCTCTGAGCTCTATAAACAACTTTGTGATGGGACTTCCCTCAACAATGGATCTAAGATTTATTGGTTTCATAGGAAGGGAAGGGGTAATGCCTACTTCATATTTCCAAAAGCTATCTCAATAGCTTGGATCAATGAATGTCAGTACTGGAGATGGATATCTATCGACATCTTTGGTAAGAAAATTGACGTGGCTGAGCTTGTAAAAGTTCGTTGGCTAGATGTACGTGTAAGGATCAAGGAATATATGCTATCAGCTGGCGTTACATATGAACTATTATGTCATCTTTTGTTAAAGTCGTGTGCATCGGGATGGCATGAACCTATTAACTTTGGACTCACCTTGCCAAATGGGACAAAATTTGTGAACAGTGAAAGCCTAGAATGTAAGCCACGAGATGTTTGGTTTACGATCAAGGTCGAGGAATTCAAGATTGGCGATAAACATGGTTGTTTGAATGCTAAGGAGTACGAGTTTAGCATGTATAACCACAATCAACATTGGAAGTCGGGATTGATCTTTAAAAGTTTTGAAATTCGACCAAAGCAACCATGTTGCAAAAGCTAA ATGGTTTCCTCAGAGCTTGAAGCAAGAGAGAACTCGGAAACAAAAGAGAAATATGGTCATTGCTTGAGTTATATTTTGCCAACAACTGGAGATCATGAGGTGCACTGGCCCTCCCCCTCTGAGCTCTATAAACAACTTTGTGATGGGACTTCCCTCAACAATGGATCTAAGATTTATTGGTTTCATAGGAAGGGAAGGGGTAATGCCTACTTCATATTTCCAAAAGCTATCTCAATAGCTTGGATCAATGAATGTCAGTACTGGAGATGGATATCTATCGACATCTTTGGTAAGAAAATTGACGTGGCTGAGCTTGTAAAAGTTCGTTGGCTAGATGTACGTGTAAGGATCAAGGAATATATGCTATCAGCTGGCGTTACATATGAACTATTATGTCATCTTTTGTTAAAGTCGTGTGCATCGGGATGGCATGAACCTATTAACTTTGGACTCACCTTGCCAAATGGGACAAAATTTGTGAACAGTGAAAGCCTAGAATGTAAGCCACGAGATGTTTGGTTTACGATCAAGGTCGAGGAATTCAAGATTGGCGATAAACATGGTTGTTTGAATGCTAAGGAGTACGAGTTTAGCATGTATAACCACAATCAACATTGGAAGTCGGGATTGATCTTTAAAAGTTTTGAAATTCGACCAAAGCAACCATGTTGCAAAAGCTAA
BLAST of CSPI01G25330 vs. Swiss-Prot
Match: LEC_LUFAC (Lectin OS=Luffa acutangula PE=1 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.6e-32 Identity = 76/207 (36.71%), Postives = 112/207 (54.11%), Query Frame = 1
BLAST of CSPI01G25330 vs. Swiss-Prot
Match: P2A01_ARATH (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 4.9e-21 Identity = 62/188 (32.98%), Postives = 92/188 (48.94%), Query Frame = 1
BLAST of CSPI01G25330 vs. Swiss-Prot
Match: P2A04_ARATH (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana GN=PP2A4 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.1e-19 Identity = 60/160 (37.50%), Postives = 81/160 (50.62%), Query Frame = 1
BLAST of CSPI01G25330 vs. Swiss-Prot
Match: P2A02_ARATH (Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana GN=PP2A2 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 7.2e-12 Identity = 44/123 (35.77%), Postives = 63/123 (51.22%), Query Frame = 1
BLAST of CSPI01G25330 vs. Swiss-Prot
Match: PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana GN=PP2B8 PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 9.4e-12 Identity = 59/207 (28.50%), Postives = 88/207 (42.51%), Query Frame = 1
BLAST of CSPI01G25330 vs. TrEMBL
Match: A0A0A0LY62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G542500 PE=4 SV=1) HSP 1 Score: 492.7 bits (1267), Expect = 2.5e-136 Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 1
BLAST of CSPI01G25330 vs. TrEMBL
Match: Q8LK97_CUCME (26 kDa phloem lectin OS=Cucumis melo GN=Lec26 PE=2 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 5.2e-94 Identity = 149/224 (66.52%), Postives = 187/224 (83.48%), Query Frame = 1
BLAST of CSPI01G25330 vs. TrEMBL
Match: Q8LK13_CUCSA (26 kDa phloem protein OS=Cucumis sativus GN=PP2 PE=2 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 2.5e-80 Identity = 131/224 (58.48%), Postives = 174/224 (77.68%), Query Frame = 1
BLAST of CSPI01G25330 vs. TrEMBL
Match: A0A0A0LVN2_CUCSA (Phloem protein OS=Cucumis sativus GN=Csa_1G542510 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 2.5e-80 Identity = 131/224 (58.48%), Postives = 174/224 (77.68%), Query Frame = 1
BLAST of CSPI01G25330 vs. TrEMBL
Match: W0ZFB6_CUCSA (Phloem lectin OS=Cucumis sativus GN=pp2 PE=2 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 1.4e-78 Identity = 130/224 (58.04%), Postives = 172/224 (76.79%), Query Frame = 1
BLAST of CSPI01G25330 vs. TAIR10
Match: AT4G19840.1 (AT4G19840.1 phloem protein 2-A1) HSP 1 Score: 102.8 bits (255), Expect = 2.8e-22 Identity = 62/188 (32.98%), Postives = 92/188 (48.94%), Query Frame = 1
BLAST of CSPI01G25330 vs. TAIR10
Match: AT1G33920.1 (AT1G33920.1 phloem protein 2-A4) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20 Identity = 60/160 (37.50%), Postives = 81/160 (50.62%), Query Frame = 1
BLAST of CSPI01G25330 vs. TAIR10
Match: AT2G02340.1 (AT2G02340.1 phloem protein 2-B8) HSP 1 Score: 72.0 bits (175), Expect = 5.3e-13 Identity = 59/207 (28.50%), Postives = 88/207 (42.51%), Query Frame = 1
BLAST of CSPI01G25330 vs. TAIR10
Match: AT1G80110.1 (AT1G80110.1 phloem protein 2-B11) HSP 1 Score: 66.6 bits (161), Expect = 2.2e-11 Identity = 60/231 (25.97%), Postives = 96/231 (41.56%), Query Frame = 1
BLAST of CSPI01G25330 vs. TAIR10
Match: AT5G45090.1 (AT5G45090.1 phloem protein 2-A7) HSP 1 Score: 62.0 bits (149), Expect = 5.5e-10 Identity = 44/141 (31.21%), Postives = 66/141 (46.81%), Query Frame = 1
BLAST of CSPI01G25330 vs. NCBI nr
Match: gi|449435554|ref|XP_004135560.1| (PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Cucumis sativus]) HSP 1 Score: 492.7 bits (1267), Expect = 3.5e-136 Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 1
BLAST of CSPI01G25330 vs. NCBI nr
Match: gi|661902909|ref|NP_001284457.1| (protein PHLOEM PROTEIN 2-LIKE A1-like [Cucumis melo]) HSP 1 Score: 352.1 bits (902), Expect = 7.5e-94 Identity = 149/224 (66.52%), Postives = 187/224 (83.48%), Query Frame = 1
BLAST of CSPI01G25330 vs. NCBI nr
Match: gi|449435552|ref|XP_004135559.1| (PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Cucumis sativus]) HSP 1 Score: 306.6 bits (784), Expect = 3.6e-80 Identity = 131/224 (58.48%), Postives = 174/224 (77.68%), Query Frame = 1
BLAST of CSPI01G25330 vs. NCBI nr
Match: gi|22023939|gb|AAM89256.1|AF527536_1 (26 kDa phloem protein [Cucumis sativus]) HSP 1 Score: 306.6 bits (784), Expect = 3.6e-80 Identity = 131/224 (58.48%), Postives = 174/224 (77.68%), Query Frame = 1
BLAST of CSPI01G25330 vs. NCBI nr
Match: gi|571272670|emb|CDK12646.1| (phloem lectin [Cucumis sativus]) HSP 1 Score: 300.8 bits (769), Expect = 2.0e-78 Identity = 130/224 (58.04%), Postives = 172/224 (76.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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