CsGy1G024730 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G024730
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Phloem lectin
Location	Chr1 : 23624732 .. 23626004 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTGGTTTGATGAGAAGGCAAAGGGTAATGCGTTCTTTATACCTCCGAGAGGCCTCAAAATATCTTTCGATCGTCAGAAGTTGATCAGATGGAAAGATTCGGAGTTTAATGGGTATACTTATTTTTTAACCATATCGTTTTAGTCTCTACATTTTGAAATATTATTTTTAAATATAACAAAATGTCACAATTTCCATTATCATGCATGGTCAATTTGCTATATATTTGTAAGTTTCTTTAACTTAGTTTGAGGGTAGTTTAATTTGGTTGATTTTAGGTAAATAAATAAATTGATCTTTGTTATCTATATACAATTTTACCATAAATTTAGAAAATACATGTTTATATATTATAGGACTAAATTAAATTTAAGATTTATTATTGAAAATAATGAATTAAAATTAAACAAAATTTAAACTATAAAGATAAAATTGGAATTTTCTTTTTCCTTTTCTTGTGTGTTGTAAACAGATTGAAAGTATATAACAAGATGAAAAAAAAAATTAAAATAAAATATAAAAGAAGCGATAGATTAGGTCTGAATTTGAATGAAATGAATCTTAATTATTTATTTTGTAATCAAAATTAAAAGGGTTGTTTGAGTGTAATTTTGAAAATTAAATAGATTAAATTACAAAATTTTGATCTTTAATCAGACGAAGGTTAGAATTATTCGGTCTTCAATATATAATTAAAATTTATTGTTCTCCATGATTTATAACATATTCTATTTACAATACAATATTCATAGGATTCTCTCAAATTATATAGATTAAATTAAGTGAAATGCATAAAGTAGTTTTTTTTCATCGTAGTTACTATTTCTAAAGTTGTTGATTTGTTGTTGATGAATCCTTCGACAGTAAGAAAACTGAATTGGCTGCATTTAGTGAAATAACTTTTCTAGAAGCACGTGGAAAGATCAAGCAACATATGCTATCATCTACCCTTACATATGACGTATTGTTTGAACTTTTGTGCAAGCCTTATGCCACTGGATATCATGTACCTACTAACTTTGAAATCACCTACCCAAAAGCAATAACAGTTGTGATCAAGGAAAACCTCGAATCTAGACCACCCAATGAATGGTTTACGATCAAAGTTGGGGAAATCAAGGTCGACGATAAACATGATTGTGACAGTGATAAGGAGTACGAGTTTAGCATGAATATCCACAGCGAGGATCGGAAGTCGGAATTGGTTTTTAAAGGCGTTCAAATTCGACCAAAACAACCAAGTTATGGAACCTCTAGTTTTAAAATATGA

mRNA sequence

ATGTATTGGTTTGATGAGAAGGCAAAGGGTAATGCGTTCTTTATACCTCCGAGAGGCCTCAAAATATCTTTCGATCGTCAGAAGTTGATCAGATGGAAAGATTCGGAGTTTAATGGTAAGAAAACTGAATTGGCTGCATTTAGTGAAATAACTTTTCTAGAAGCACGTGGAAAGATCAAGCAACATATGCTATCATCTACCCTTACATATGACGTATTGTTTGAACTTTTGTGCAAGCCTTATGCCACTGGATATCATGTACCTACTAACTTTGAAATCACCTACCCAAAAGCAATAACAGTTGTGATCAAGGAAAACCTCGAATCTAGACCACCCAATGAATGGTTTACGATCAAAGTTGGGGAAATCAAGGTCGACGATAAACATGATTGTGACAGTGATAAGGAGTACGAGTTTAGCATGAATATCCACAGCGAGGATCGGAAGTCGGAATTGGTTTTTAAAGGCGTTCAAATTCGACCAAAACAACCAAGTTATGGAACCTCTAGTTTTAAAATATGA

Coding sequence (CDS)

ATGTATTGGTTTGATGAGAAGGCAAAGGGTAATGCGTTCTTTATACCTCCGAGAGGCCTCAAAATATCTTTCGATCGTCAGAAGTTGATCAGATGGAAAGATTCGGAGTTTAATGGTAAGAAAACTGAATTGGCTGCATTTAGTGAAATAACTTTTCTAGAAGCACGTGGAAAGATCAAGCAACATATGCTATCATCTACCCTTACATATGACGTATTGTTTGAACTTTTGTGCAAGCCTTATGCCACTGGATATCATGTACCTACTAACTTTGAAATCACCTACCCAAAAGCAATAACAGTTGTGATCAAGGAAAACCTCGAATCTAGACCACCCAATGAATGGTTTACGATCAAAGTTGGGGAAATCAAGGTCGACGATAAACATGATTGTGACAGTGATAAGGAGTACGAGTTTAGCATGAATATCCACAGCGAGGATCGGAAGTCGGAATTGGTTTTTAAAGGCGTTCAAATTCGACCAAAACAACCAAGTTATGGAACCTCTAGTTTTAAAATATGA

Protein sequence

MYWFDEKAKGNAFFIPPRGLKISFDRQKLIRWKDSEFNGKKTELAAFSEITFLEARGKIKQHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVIKENLESRPPNEWFTIKVGEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFKGVQIRPKQPSYGTSSFKI

Homology

[Close]

BLAST of CsGy1G024730 vs. NCBI nr
Match: XP_004135557.1 (PREDICTED: uncharacterized protein LOC101213252 [Cucumis sativus] >KGN65958.1 phloem lectin [Cucumis sativus])

HSP 1 Score: 359.4 bits (921), Expect = 6.9e-96
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MYWFDEKAKGNAFFIPPRGLKISFDRQKLIRWKDSEFNGKKTELAAFSEITFLEARGKIK 60
           MYWFDEKAKGNAFFIPPRGLKISFDRQKLIRWKDSEFNGKKTELAAFSEITFLEARGKIK
Sbjct: 59  MYWFDEKAKGNAFFIPPRGLKISFDRQKLIRWKDSEFNGKKTELAAFSEITFLEARGKIK 118

Query: 61  QHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVIKENLESRPPNEWFTIKV 120
           QHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVIKENLESRPPNEWFTIKV
Sbjct: 119 QHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVIKENLESRPPNEWFTIKV 178

Query: 121 GEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFKGVQIRPKQPSYGTSSFKI 174
           GEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFKGVQIRPKQPSYGTSSFKI
Sbjct: 179 GEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFKGVQIRPKQPSYGTSSFKI 231

[Close]

BLAST of CsGy1G024730 vs. NCBI nr
Match: NP_001284457.1 (protein PHLOEM PROTEIN 2-LIKE A1-like [Cucumis melo] >AAM74921.1 26 kDa phloem lectin [Cucumis melo])

HSP 1 Score: 181.0 bits (458), Expect = 3.4e-42
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 0


Query: 1   MYWFDEKAKGNAFFIPPRGLKISF-DRQKLIRWKDSEFNGKKTELAAFSEITFLEARGKI 60
           +YWFD+K KGN +F+ P+ L I++ D ++  +W   E +GKK E+A    +++L+ARGKI
Sbjct: 58  IYWFDKKGKGNGYFLLPKSLSIAWIDDRRYWKWIFVELSGKKLEVAELIRVSWLDARGKI 117

Query: 61  KQHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVIKENLESRPPNEWFTIK 120
           K++MLS  + Y+VL  LL KP A+G+H P NF +T+P   T V +E+LE RP + WFT+K
Sbjct: 118 KEYMLSPGIVYEVLCHLLLKPGASGWHEPINFGLTFPDGKTYVNQESLECRPRDVWFTVK 177

Query: 121 VGEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFKGVQIRPKQPSYG 168
           VGE KVDD+H CDS KEYEFSM  H    K+E++ KG +IRPKQ S G
Sbjct: 178 VGEFKVDDRHGCDSTKEYEFSMYNHGGHWKTEMILKGYEIRPKQSSCG 225

[Close]

BLAST of CsGy1G024730 vs. NCBI nr
Match: XP_008465823.1 (PREDICTED: uncharacterized protein LOC103503413, partial [Cucumis melo])

HSP 1 Score: 178.3 bits (451), Expect = 2.2e-41
Identity = 87/112 (77.68%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 44  LAAFSEITFLEARGKIKQHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVI 103
           +A F EIT+LEA GKI+QHMLSSTLTYDVLFELL KPY TG+  PT F +T+PKA  VVI
Sbjct: 1   MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALTFPKAAKVVI 60

Query: 104 KENLESRPPNEWFTIKVGEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFK 156
           KENLESRP + WFTIKVGEIKV+DKHDCDSDKEYEFSM  HSEDRKS L+FK
Sbjct: 61  KENLESRPRSIWFTIKVGEIKVEDKHDCDSDKEYEFSMYNHSEDRKSGLIFK 112

[Close]

BLAST of CsGy1G024730 vs. NCBI nr
Match: XP_004135560.1 (PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Cucumis sativus] >KGN65959.1 hypothetical protein Csa_1G542500 [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 7.6e-34
Identity = 75/165 (45.45%), Postives = 109/165 (66.06%), Query Frame = 0


Query: 1   MYWFDEKAKGNAFFIPPRGLKISFDRQ-KLIRWKDSEFNGKKTELAAFSEITFLEARGKI 60
           +YWF  K +GNA+FI P+ + I++  + +  RW   E  GKK ++A   ++ +L+ R +I
Sbjct: 58  IYWFHRKGRGNAYFIFPKAISIAWINECQYWRWISIEIFGKKIDVAELVKVRWLDVRVRI 117

Query: 61  KQHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVIKENLESRPPNEWFTIK 120
           K++MLS+ +TY++L  LL K  A+G+H P NF +T P     V  E+LE +P + WFTIK
Sbjct: 118 KEYMLSAGVTYELLCHLLLKSCASGWHEPINFGLTLPNGTKFVNSESLECKPRDVWFTIK 177

Query: 121 VGEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFKGVQIRPKQP 165
           V E K+ DKH C + KEYEFSM  H++  KS L+FK  +IRPKQP
Sbjct: 178 VEEFKIGDKHGCLNAKEYEFSMYNHNQHWKSGLIFKSFEIRPKQP 222

[Close]

BLAST of CsGy1G024730 vs. NCBI nr
Match: AAM82557.1 (26 kDa phloem lectin, partial [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 4.9e-33
Identity = 75/168 (44.64%), Postives = 108/168 (64.29%), Query Frame = 0


Query: 1   MYWFDEKAKGNAFFIPPRGLKISF-DRQKLIRWKDSEFNGKKTELAAFSEITFLEARGKI 60
           +YWFD+K KGN + + P+ L IS+ D  +  +W   E  GKK ++A   ++ +L+  GK+
Sbjct: 46  LYWFDKKGKGNRYVLLPKSLTISWIDDCQYWKWIPGEIYGKKIDVAELIKVCWLDISGKL 105

Query: 61  KQHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVIKENLESRPPNEWFTIK 120
           KQ+ LSS + Y+V+  +   P A+G+  P  F IT P    + IKE+++ +P + W TIK
Sbjct: 106 KQYALSSGVLYEVICHVGVTPCASGWQEPVTFAITLPDGKKIEIKESIQCKPRDVWITIK 165

Query: 121 VGEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFKGVQIRPKQPSYG 168
           +GE KV DKHDC+SDKEYEF +  HS   K+ L FKG +IRPKQ S G
Sbjct: 166 IGEFKV-DKHDCNSDKEYEFRVYSHSSQWKTGLKFKGFEIRPKQSSCG 212

[Close]

BLAST of CsGy1G024730 vs. TAIR10
Match: AT4G19840.1 (phloem protein 2-A1)

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-09
Identity = 49/167 (29.34%), Postives = 76/167 (45.51%), Query Frame = 0


Query: 2   YWFDEKAKGNAFFIPPRGLKISF-DRQKLIRW-KDSEFNGKKTELAAFSEITFLEARGKI 61
           YW DE+   N F +  + L I++ D      W  + E   +  E      + +L+  GK 
Sbjct: 85  YWVDER-NSNCFMLFAKNLSITWSDDVNYWTWFTEKESPNENVEAVGLKNVCWLDITGKF 144

Query: 62  KQHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYP--KAITVVIKENLESRPPNEWFT 121
               L+  + Y+V+F++  +  A G+  P N ++  P  K      K +L   P  +W  
Sbjct: 145 DTRNLTPGIVYEVVFKVKLEDPAYGWDTPVNLKLVLPNGKEKPQEKKVSLRELPRYKWVD 204

Query: 122 IKVGEIKVDDKHDCDSDKEYEFSMNIHSED-RKSELVFKGVQIRPKQ 164
           ++VGE  V +K    +  E  FSM  H+    K  L  KGV IRPKQ
Sbjct: 205 VRVGEF-VPEK---SAAGEITFSMYEHAAGVWKKGLSLKGVAIRPKQ 246

[Close]

BLAST of CsGy1G024730 vs. Swiss-Prot
Match: sp|C0HJV2|LEC_LUFAC (Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-16
Identity = 50/163 (30.67%), Postives = 86/163 (52.76%), Query Frame = 0


Query: 2   YWFDEKAKGNAFFIPPRGLKISFDRQKLI-RWKDSEFNGKKTELAAFSEITFLEARGKIK 61
           YWFD+ A+ N F +  R L I++ + K   RW   + +G   E+A   ++ +L   G I+
Sbjct: 51  YWFDKNAESNCFMLYARDLLITWSQDKRYWRWNPFQEHGNTLEVAELIDVCWLNIVGNIE 110

Query: 62  QHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVIKENLESRPPNEWFTIKV 121
             +LS  ++Y+  FE++    A+G+ +P + ++  P       + NL+ +P   WF I V
Sbjct: 111 TSVLSPGISYEAAFEVMLTNSASGWRIPVDVKLKMPDGSEQESQVNLQDKPRGVWFFISV 170

Query: 122 GEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFKGVQIRPKQ 164
           G  K+      ++    EFS+  H E ++  LV KG+ I+PKQ
Sbjct: 171 GHFKISVG---ETIGNIEFSIVQHQEAKRGLLV-KGLVIQPKQ 209

[Close]

BLAST of CsGy1G024730 vs. Swiss-Prot
Match: sp|O81866|P2A02_ARATH (Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana OX=3702 GN=PP2A2 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.2e-10
Identity = 40/127 (31.50%), Postives = 63/127 (49.61%), Query Frame = 0


Query: 37  FNGKKTELAAFSEITFLEARGKIKQHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYP 96
           ++  +TE+A    + +LE  GK +   L+    Y+V+F +     A G+    NF++  P
Sbjct: 70  YSDVRTEVAKMERVAWLEVVGKFETEKLTPNSLYEVVFVVKLIDSAKGWDFRVNFKLVLP 129

Query: 97  KAITVVIKENLESRPPNEWFTIKVGEIKVDDKHDCDSDKEYEFSM-NIHSEDRKSELVFK 156
              T   +EN+     N+W  I  GE  +  +H      + EFSM  + S+  KS L+ K
Sbjct: 130 TGETKERRENVNLLERNKWVEIPAGEFMISPEH---LSGKIEFSMLEVKSDQWKSGLIVK 189

Query: 157 GVQIRPK 163
           GV IRPK
Sbjct: 190 GVAIRPK 193

[Close]

BLAST of CsGy1G024730 vs. Swiss-Prot
Match: sp|O81865|P2A01_ARATH (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.2e-08
Identity = 49/167 (29.34%), Postives = 76/167 (45.51%), Query Frame = 0


Query: 2   YWFDEKAKGNAFFIPPRGLKISF-DRQKLIRW-KDSEFNGKKTELAAFSEITFLEARGKI 61
           YW DE+   N F +  + L I++ D      W  + E   +  E      + +L+  GK 
Sbjct: 85  YWVDER-NSNCFMLFAKNLSITWSDDVNYWTWFTEKESPNENVEAVGLKNVCWLDITGKF 144

Query: 62  KQHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYP--KAITVVIKENLESRPPNEWFT 121
               L+  + Y+V+F++  +  A G+  P N ++  P  K      K +L   P  +W  
Sbjct: 145 DTRNLTPGIVYEVVFKVKLEDPAYGWDTPVNLKLVLPNGKEKPQEKKVSLRELPRYKWVD 204

Query: 122 IKVGEIKVDDKHDCDSDKEYEFSMNIHSED-RKSELVFKGVQIRPKQ 164
           ++VGE  V +K    +  E  FSM  H+    K  L  KGV IRPKQ
Sbjct: 205 VRVGEF-VPEK---SAAGEITFSMYEHAAGVWKKGLSLKGVAIRPKQ 246

[Close]

BLAST of CsGy1G024730 vs. TrEMBL
Match: tr|A0A0A0LW08|A0A0A0LW08_CUCSA (Phloem lectin OS=Cucumis sativus OX=3659 GN=Csa_1G542490 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 4.6e-96
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MYWFDEKAKGNAFFIPPRGLKISFDRQKLIRWKDSEFNGKKTELAAFSEITFLEARGKIK 60
           MYWFDEKAKGNAFFIPPRGLKISFDRQKLIRWKDSEFNGKKTELAAFSEITFLEARGKIK
Sbjct: 59  MYWFDEKAKGNAFFIPPRGLKISFDRQKLIRWKDSEFNGKKTELAAFSEITFLEARGKIK 118

Query: 61  QHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVIKENLESRPPNEWFTIKV 120
           QHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVIKENLESRPPNEWFTIKV
Sbjct: 119 QHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVIKENLESRPPNEWFTIKV 178

Query: 121 GEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFKGVQIRPKQPSYGTSSFKI 174
           GEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFKGVQIRPKQPSYGTSSFKI
Sbjct: 179 GEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFKGVQIRPKQPSYGTSSFKI 231

[Close]

BLAST of CsGy1G024730 vs. TrEMBL
Match: tr|Q8LK97|Q8LK97_CUCME (26 kDa phloem lectin OS=Cucumis melo OX=3656 GN=Lec26 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.2e-42
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 0


Query: 1   MYWFDEKAKGNAFFIPPRGLKISF-DRQKLIRWKDSEFNGKKTELAAFSEITFLEARGKI 60
           +YWFD+K KGN +F+ P+ L I++ D ++  +W   E +GKK E+A    +++L+ARGKI
Sbjct: 58  IYWFDKKGKGNGYFLLPKSLSIAWIDDRRYWKWIFVELSGKKLEVAELIRVSWLDARGKI 117

Query: 61  KQHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVIKENLESRPPNEWFTIK 120
           K++MLS  + Y+VL  LL KP A+G+H P NF +T+P   T V +E+LE RP + WFT+K
Sbjct: 118 KEYMLSPGIVYEVLCHLLLKPGASGWHEPINFGLTFPDGKTYVNQESLECRPRDVWFTVK 177

Query: 121 VGEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFKGVQIRPKQPSYG 168
           VGE KVDD+H CDS KEYEFSM  H    K+E++ KG +IRPKQ S G
Sbjct: 178 VGEFKVDDRHGCDSTKEYEFSMYNHGGHWKTEMILKGYEIRPKQSSCG 225

[Close]

BLAST of CsGy1G024730 vs. TrEMBL
Match: tr|A0A1S3CPT4|A0A1S3CPT4_CUCME (uncharacterized protein LOC103503413 OS=Cucumis melo OX=3656 GN=LOC103503413 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.5e-41
Identity = 87/112 (77.68%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 44  LAAFSEITFLEARGKIKQHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVI 103
           +A F EIT+LEA GKI+QHMLSSTLTYDVLFELL KPY TG+  PT F +T+PKA  VVI
Sbjct: 1   MAMFKEITWLEAHGKIRQHMLSSTLTYDVLFELLIKPYVTGFIKPTTFALTFPKAAKVVI 60

Query: 104 KENLESRPPNEWFTIKVGEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFK 156
           KENLESRP + WFTIKVGEIKV+DKHDCDSDKEYEFSM  HSEDRKS L+FK
Sbjct: 61  KENLESRPRSIWFTIKVGEIKVEDKHDCDSDKEYEFSMYNHSEDRKSGLIFK 112

[Close]

BLAST of CsGy1G024730 vs. TrEMBL
Match: tr|A0A0A0LY62|A0A0A0LY62_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G542500 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.0e-34
Identity = 75/165 (45.45%), Postives = 109/165 (66.06%), Query Frame = 0


Query: 1   MYWFDEKAKGNAFFIPPRGLKISFDRQ-KLIRWKDSEFNGKKTELAAFSEITFLEARGKI 60
           +YWF  K +GNA+FI P+ + I++  + +  RW   E  GKK ++A   ++ +L+ R +I
Sbjct: 58  IYWFHRKGRGNAYFIFPKAISIAWINECQYWRWISIEIFGKKIDVAELVKVRWLDVRVRI 117

Query: 61  KQHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVIKENLESRPPNEWFTIK 120
           K++MLS+ +TY++L  LL K  A+G+H P NF +T P     V  E+LE +P + WFTIK
Sbjct: 118 KEYMLSAGVTYELLCHLLLKSCASGWHEPINFGLTLPNGTKFVNSESLECKPRDVWFTIK 177

Query: 121 VGEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFKGVQIRPKQP 165
           V E K+ DKH C + KEYEFSM  H++  KS L+FK  +IRPKQP
Sbjct: 178 VEEFKIGDKHGCLNAKEYEFSMYNHNQHWKSGLIFKSFEIRPKQP 222

[Close]

BLAST of CsGy1G024730 vs. TrEMBL
Match: tr|Q8LK68|Q8LK68_CUCSA (26 kDa phloem lectin (Fragment) OS=Cucumis sativus OX=3659 GN=Lec26 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.2e-33
Identity = 75/168 (44.64%), Postives = 108/168 (64.29%), Query Frame = 0


Query: 1   MYWFDEKAKGNAFFIPPRGLKISF-DRQKLIRWKDSEFNGKKTELAAFSEITFLEARGKI 60
           +YWFD+K KGN + + P+ L IS+ D  +  +W   E  GKK ++A   ++ +L+  GK+
Sbjct: 46  LYWFDKKGKGNRYVLLPKSLTISWIDDCQYWKWIPGEIYGKKIDVAELIKVCWLDISGKL 105

Query: 61  KQHMLSSTLTYDVLFELLCKPYATGYHVPTNFEITYPKAITVVIKENLESRPPNEWFTIK 120
           KQ+ LSS + Y+V+  +   P A+G+  P  F IT P    + IKE+++ +P + W TIK
Sbjct: 106 KQYALSSGVLYEVICHVGVTPCASGWQEPVTFAITLPDGKKIEIKESIQCKPRDVWITIK 165

Query: 121 VGEIKVDDKHDCDSDKEYEFSMNIHSEDRKSELVFKGVQIRPKQPSYG 168
           +GE KV DKHDC+SDKEYEF +  HS   K+ L FKG +IRPKQ S G
Sbjct: 166 IGEFKV-DKHDCNSDKEYEFRVYSHSSQWKTGLKFKGFEIRPKQSSCG 212

The following BLAST results are available for this feature:

BLAST of CsGy1G024730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135557.1	6.9e-96	100.00	PREDICTED: uncharacterized protein LOC101213252 [Cucumis sativus] >KGN65958.1 ph...	[more]
NP_001284457.1	3.4e-42	51.19	protein PHLOEM PROTEIN 2-LIKE A1-like [Cucumis melo] >AAM74921.1 26 kDa phloem l...	[more]
XP_008465823.1	2.2e-41	77.68	PREDICTED: uncharacterized protein LOC103503413, partial [Cucumis melo]	[more]
XP_004135560.1	7.6e-34	45.45	PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Cucumis sativu...	[more]
AAM82557.1	4.9e-33	44.64	26 kDa phloem lectin, partial [Cucumis sativus]	[more]

BLAST of CsGy1G024730 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19840.1	1.2e-09	29.34	phloem protein 2-A1	[more]

BLAST of CsGy1G024730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|C0HJV2\|LEC_LUFAC	1.7e-16	30.67	Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1	[more]
sp\|O81866\|P2A02_ARATH	5.2e-10	31.50	Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana OX=3702 GN=PP2A2 PE=2 S...	[more]
sp\|O81865\|P2A01_ARATH	2.2e-08	29.34	Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 S...	[more]

BLAST of CsGy1G024730 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LW08\|A0A0A0LW08_CUCSA	4.6e-96	100.00	Phloem lectin OS=Cucumis sativus OX=3659 GN=Csa_1G542490 PE=4 SV=1	[more]
tr\|Q8LK97\|Q8LK97_CUCME	2.2e-42	51.19	26 kDa phloem lectin OS=Cucumis melo OX=3656 GN=Lec26 PE=2 SV=1	[more]
tr\|A0A1S3CPT4\|A0A1S3CPT4_CUCME	1.5e-41	77.68	uncharacterized protein LOC103503413 OS=Cucumis melo OX=3656 GN=LOC103503413 PE=...	[more]
tr\|A0A0A0LY62\|A0A0A0LY62_CUCSA	5.0e-34	45.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G542500 PE=4 SV=1	[more]
tr\|Q8LK68\|Q8LK68_CUCSA	3.2e-33	44.64	26 kDa phloem lectin (Fragment) OS=Cucumis sativus OX=3659 GN=Lec26 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025886	PP2-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0030246	carbohydrate binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G024730.1	CsGy1G024730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 12..161 e-value: 4.9E-17 score: 62.3
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 2..163
None	No IPR available	PANTHER	PTHR32278:SF3	SUBFAMILY NOT NAMED	coord: 2..163

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G024730	Csa1G542490	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G024730	CSPI01G25330	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G024730	CsaV3_1G037650	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G024730	Bhi08G000810	Wax gourd	cgybwgoB051

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G024730	Silver-seed gourd	carcgybB0404
CsGy1G024730	Silver-seed gourd	carcgybB0458
CsGy1G024730	Watermelon (97103) v2	cgybwmbB040
CsGy1G024730	Cucurbita maxima (Rimu)	cgybcmaB076
CsGy1G024730	Cucurbita maxima (Rimu)	cgybcmaB087
CsGy1G024730	Cucurbita moschata (Rifu)	cgybcmoB070
CsGy1G024730	Cucurbita moschata (Rifu)	cgybcmoB083
CsGy1G024730	Cucurbita pepo (Zucchini)	cgybcpeB019
CsGy1G024730	Cucurbita pepo (Zucchini)	cgybcpeB072
CsGy1G024730	Bottle gourd (USVL1VR-Ls)	cgyblsiB019
CsGy1G024730	Bottle gourd (USVL1VR-Ls)	cgyblsiB031
CsGy1G024730	Melon (DHL92) v3.5.1	cgybmeB027
CsGy1G024730	Melon (DHL92) v3.6.1	cgybmedB026
CsGy1G024730	Watermelon (Charleston Gray)	cgybwcgB039
CsGy1G024730	Watermelon (97103) v1	cgybwmB015