ClCG05G002360.1 (mRNA) Watermelon (Charleston Gray)

Overview
NameClCG05G002360.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRad51 DNA recombination/repair protein
LocationCG_Chr05 : 2257646 .. 2262635 (-)
Sequence length1538
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCACTTTCTTCCTGGCGATAGTCGATAGTGTCACTTCGAGATCCAGAGAGGAACCAAAAATGGAGGTCGGGAGGTTACCCATCTCCGCCACGCTGCGAGGTAAACTGATTTCAGCCGGCTATACTACTCTCTCCTCTCTCGCATCCGTCTCTCCTTCCGACCTTGCTCGAGGTATTATTTCTCTCCATCTCTCATCAACGAACTTCCTCTTCAACTTCTCGTTTCGCTTTTAATTCTATGGTTTTCTGTTTGTTCTCGATCTTTGTACTTGTGTCGTTTCTATACATTTGTATGTGTCTTTTCCGCTTTTATGATATAATTCGACGCACGAGTTTTTTTATCAAGGAGTTTGAAATTAGAAAAGACTCGGATGAACTTTCATTGCAGGAAAGTTTAACCTCTTAAGAGATTTTTTTAGGAGAAGAAACATTCGGCAATCCTGAACAGAACTTGAAATAGAAAACGACCATACGAGTCTCAAATTGTGGTAACAATTGACTACTTGTAATGATCAGACAGTAATCTATTGTAATTAAATCATTTGACTGTCTTAATGATGTTAATTGCAACGATTGTTAAATGATTATCGAACTCCTGTGAATTGGGTTACAGTTGTGTTGAGTTTCGGACGAAAATTAGTTTTATATCCCTGTATGTTCCTGTTGGAAGTAATCAAATAGTTTTGATGACCAAAACTATATACAGCATTGGTTCATTCTTCTTTTTACTATATCTTTTAAGGTTAGGTATTTGAAAGGAATTTATTTCTCAACATCCCTCGTTAAAACAAACAAATATTGTAGCATTTCTTTGATCTTAAATTTTGATTGGACGGAAGCATGGCTTTTTCTTCATTATTAGTAACCCAAAAATTCACGCACTTCTGCTTATTTGCAGTAACAATTTTTCTTCAGAATGAGCTTGTCTCGGGCTTTTTCCTGTTATCATGCTGCGGTTTATATTACGTGTATTTCTCTTAATTTTATCTATTTACTTATTTCTTTCCTGCTCAATTTCATCGATCTTGTTATTTTGGTTTATACATTAAATCCTTGTCTTTGGATGTTGAGGGTTTCTAACAAGCCTTCTCATGTGATTCAGAACTGGAAATCTCGGACAATGAAGCTTTTGAAGTTCTCAAGTTTGGATCACATGGTAGTGGGCTGGACAGGTCAGTCAGGAGCAGTGCTATTGTTGATGGTACATTTTCCTCTTTCATAGTTTATTTTTGAAAGGGAAAGAAAGAAGAAAACTGTGAACTGTGTGACTTATGGAATCATGCGTATGGTGCATATGGTTTGTTTAAATGTCATCACTTTGTTGGTTCTGAAATTTCTTCTTCAAAGATGAGTACTTCTTAATTTACTCCGAATAAACGTAGATGACTCAAGAAATAGACAAAACTGGTTCTTATCTTTCTTTCCTTTTTTAGTTTTTAATTTTTTAATGACAATTTCTTGTAGGTATGTTCCATTTAAATGAAGCTTCCACTGTGTTTTATATCAATAATAAATTTTTTATTGTTAACTTATCCTGTAGTGGTTTATTTCCATAAATTGGTAATGATATATTTGTGCACATCTGGTTTCTTCTAAGCAATCTTTTTTCATATTGAACCAATGTTATGAATTTCTATCCATCACCTCAATGTGTATGGAAAATACTTTATCAAAAGTGTAAATATCTTATGATATACCTTGATGGGCTCATTTACTATGAGTTAGCTGTTTTAAATATTGATGTTGATGTGCTCATTGATGTATATCTTTTTTGTTTGTCTGTTTAAATTACTTTCATATTTTATTATTTTCTAATCATTATTAATATATCGTCAAGTTAGTTTTGATCAATAGATGTAATTTCAAATATCTGATTTGATTTCTTATCTTGTACAGGTGCAGAGACTGCTTGGGATTTGCTCCACAAAGAGAAGTTCATTTCTCGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGAGTTAATAGCAGTGAAGTTACGGAAATTGGTTAGTGAGCATCATCCTTTCTTCTGGCCAGCTGCATTATTATGTATATTGCTACATTGTTTTCTCCCCTTTACTTTTAAAGAATATTGCACAATATTTATATATAGTCAACTTATGTTCTATTACTATGCTTCTAGCAATATGAGCATTTAAGATAATCTCTTTATTTATACCAGGTGGAGTACCGGGCATAGGTAAAACACAGCTTGGGTATGAATTTTTGTTATATGTTTCTTTCCCAGTATGAAAATGGTTCTTTGTTGTTTAGAAATAAAATGTCACGATCTTTGTTTGTATTGAGTAACAGGATTCAGCTTGCTGTAAATGTTCAAATTCCAGGTGCATTTGGGGGTGTAGGTGGAAAAGCAGTTTATATAGGTAGGTTCCCTTTCAGATTTTGCTCCTGGTTCTTTTCGACAATTTTGCTAGTGATCTATAAATGCAACCTAATTAGGGATATGGCTTTCCTTGATTTGTAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCCTTGCAGATTGCTGAAGCATGTATAGAAGATATGTCAGATTACAGTGTCTTACTAAAGAAGAATGCCATACCTCATCAAATTCAAATCGAATCAAAAGATATCTTGGAAAACATATATTATTTTCGTGTGTGCAGCTATACAGAGCAAATTGCTTTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTATGTAGATTTTTCTTTTAACTCTTAATTCAGTGTCTAGGCAAATAATTCGGATGTGTAGTTCCCTCGTATTTCAAGTTTATCTTGTATTACATTACTTAATGATGCCATGTTATTTGGAAGCTTTCTTCTTTTGTCTGGAGTACGTTGTTGCTTTTCTTGATTTGGATACTTATAACCAAGTTTTTTCTGAATTAAATGTTTTTTTTTCTTCATCTTGTTTGTCGGCCTTGAGTTCTGAGTGTTCTGAAAATTACCGATCATTTCTTTGCAGGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGATGACTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCTCTTAAGTTGATGAAGCTGGCCAAGAAGTTTAGTTTGGCTGTAAGAATCAATCATTTCTCATTATAATGTTTCAAACTTATTCATTTGTATGATGGGGTATCAACTTAAATTGATATGAGCAAGAGCTGCTAGCCTGCTTTATAGTTAATTGTAAAAAACGTCATCTTCCTTGCATCTTCCTTGCAGTTGATGAGTTCCACTGACCTCTATTTGGTTGATATGCAAAGAAAATTCACTGCACTTGAATGTGTCTAAACTTTAAGCTAGAATATTGAGTAAGTTTTATAAATAAAATCTGGCTCATGGAAATAACAAAAACCACCGTATTTGATTAATAAACTTAGAATTTATGAACCTCACATTACATTTGAAACATTTAGAAATATTAGCTTTTGAACTCCCGATTCAGTTTTTTAACATAAGGTTCAGCATGATATATGTAAATCATTTAAATGGATGAGAAATTCATTTATTTGAAGAAAATATATTTAAGCAGATAATTTTCTTCCTATGCTCCTTCCATATCATGTCAATATTCTGAATGTGCATCTTTTACTTTTCAACCAACTAAGAGATGCATATATGCTTGGTTGTCACTACCGGTTTTATTTTACATGACTTTCACTGTCCTTTGTTATATGTCAACTGCCTTATGTTCTTACATTCCATTTAGGATCAGGAATAGGTGTAATTAGACCTGTTTTTTTACATATCTCTAGTTATTTAGGGGCCAGGACAAAGGGTCGTGATCCTGCAAAGGTGAACTAATACAAAAACACGTCCTCAATTCATACTAGAAGTCCACTTCAGTCATTTGAGTCTTTGACAACCACTCTCTCCTGGGAAACTCCTTGTTCTATGATTGATTTGACCATTTTCTTTAGCGGAAGCTGAAAACAGTTATCATTTTCCTTCTAATTTATTTTATACTTTCTTGTTTCATTCTTGCTGAAAACAGTTATCATTTTCCTTCTAATTTATTTTATACTTTCTTGTTTCATTCATGCTCGTAGTAACTTTAATTGTTGGGTTTTACTTTTATTCCAATGTTTTCCCCCTGCCTTAGTTGTTTTCTTTTCCCTCTATTCTCCAACCCTGTGGCAGGTTGTTCTATTTAATCAGGTGACCACTAAGTTCGCCGAAGGTTCATTCCAATTAACTCTTGCATTGGGTATGTCCTTTTAAGTCACCCCTTACCTTACACTGTTGAAAATCATTGTTGATGTGTTACTTGTTGCACTCCCTTGGATGTCTTTAAGCATTATGATTCCATTGAACTGATTAGGTGATAGCTGGTCACACTCTTGCACGAATCGGATCATTTTATATTGGAACGGCGATGAAAGGTACGCATATCTTGAAAAGTCACCCTCTCTTCAATCTGCCTCGGCACCTTATTCTGTGACTTGTAAAGGCATTAGAAATTCTACATCAAGTAACAAGAGAACCAAAATGATGTAAGATTTGAAACGCCTTTAAAGCTCGCATGAATTCCTCTTGTTCTCACGCTTCATCTTATTTAAGCATGCATAGTTGAATTACTTGGATATGGGAAATTGAAAATTGCCCTTTTTTGTTAAATAGCTGCTCACATTTATTTTCTTGCCGTCAGCTGGAATCTTTTTCATGGTTCCCCCCTCTATATAGTTTATAAAGTAATCATTTAGTTATATTAATACCTCTTCTTTTTAGAAAAATGAAAGTTTGGTTATTGATAATGTTGTTTTTAGCCCAAATAATTCTCGTGATTTGAAATACTCTGTTGGTCATTTTGATACTAAGTTTAGGTGAGTTAGGCTTTGTTTCATAACTATTTGATAACCATCTAGGTTTTGGTTGATTTGAAAATAAAGTATATAAATACTACTTCGACAGATGTTTTTCTTTGTTTTGTTAG

mRNA sequence

TTTCACTTTCTTCCTGGCGATAGTCGATAGTGTCACTTCGAGATCCAGAGAGGAACCAAAAATGGAGGTCGGGAGGTTACCCATCTCCGCCACGCTGCGAGGTAAACTGATTTCAGCCGGCTATACTACTCTCTCCTCTCTCGCATCCGTCTCTCCTTCCGACCTTGCTCGAGAACTGGAAATCTCGGACAATGAAGCTTTTGAAGTTCTCAAGTTTGGATCACATGGTAGTGGGCTGGACAGGTCAGTCAGGAGCAGTGCTATTGTTGATGGTGCAGAGACTGCTTGGGATTTGCTCCACAAAGAGAAGTTCATTTCTCGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGAGTTAATAGCAGTGAAGTTACGGAAATTGGTGGAGTACCGGGCATAGGTAAAACACAGCTTGGGATTCAGCTTGCTGTAAATGTTCAAATTCCAGGTGCATTTGGGGGTGTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCCTTGCAGATTGCTGAAGCATGTATAGAAGATATGTCAGATTACAGTGTCTTACTAAAGAAGAATGCCATACCTCATCAAATTCAAATCGAATCAAAAGATATCTTGGAAAACATATATTATTTTCGTGTGTGCAGCTATACAGAGCAAATTGCTTTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGATGACTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCTCTTAAGTTGATGAAGCTGGCCAAGAAGTTTAGTTTGGCTGTTGTTCTATTTAATCAGGTGACCACTAAGTTCGCCGAAGGTTCATTCCAATTAACTCTTGCATTGGGTGATAGCTGGTCACACTCTTGCACGAATCGGATCATTTTATATTGGAACGGCGATGAAAGGTACGCATATCTTGAAAAGTCACCCTCTCTTCAATCTGCCTCGGCACCTTATTCTGTGACTTGTAAAGGCATTAGAAATTCTACATCAAGTAACAAGAGAACCAAAATGATGTAAGATTTGAAACGCCTTTAAAGCTCGCATGAATTCCTCTTGTTCTCACGCTTCATCTTATTTAAGCATGCATAGTTGAATTACTTGGATATGGGAAATTGAAAATTGCCCTTTTTTGTTAAATAGCTGCTCACATTTATTTTCTTGCCGTCAGCTGGAATCTTTTTCATGGTTCCCCCCTCTATATAGTTTATAAAGTAATCATTTAGTTATATTAATACCTCTTCTTTTTAGAAAAATGAAAGTTTGGTTATTGATAATGTTGTTTTTAGCCCAAATAATTCTCGTGATTTGAAATACTCTGTTGGTCATTTTGATACTAAGTTTAGGTGAGTTAGGCTTTGTTTCATAACTATTTGATAACCATCTAGGTTTTGGTTGATTTGAAAATAAAGTATATAAATACTACTTCGACAGATGTTTTTCTTTGTTTTGTTAG

Coding sequence (CDS)

ATGGAGGTCGGGAGGTTACCCATCTCCGCCACGCTGCGAGGTAAACTGATTTCAGCCGGCTATACTACTCTCTCCTCTCTCGCATCCGTCTCTCCTTCCGACCTTGCTCGAGAACTGGAAATCTCGGACAATGAAGCTTTTGAAGTTCTCAAGTTTGGATCACATGGTAGTGGGCTGGACAGGTCAGTCAGGAGCAGTGCTATTGTTGATGGTGCAGAGACTGCTTGGGATTTGCTCCACAAAGAGAAGTTCATTTCTCGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGAGTTAATAGCAGTGAAGTTACGGAAATTGGTGGAGTACCGGGCATAGGTAAAACACAGCTTGGGATTCAGCTTGCTGTAAATGTTCAAATTCCAGGTGCATTTGGGGGTGTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCCTTGCAGATTGCTGAAGCATGTATAGAAGATATGTCAGATTACAGTGTCTTACTAAAGAAGAATGCCATACCTCATCAAATTCAAATCGAATCAAAAGATATCTTGGAAAACATATATTATTTTCGTGTGTGCAGCTATACAGAGCAAATTGCTTTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGATGACTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCTCTTAAGTTGATGAAGCTGGCCAAGAAGTTTAGTTTGGCTGTTGTTCTATTTAATCAGGTGACCACTAAGTTCGCCGAAGGTTCATTCCAATTAACTCTTGCATTGGGTGATAGCTGGTCACACTCTTGCACGAATCGGATCATTTTATATTGGAACGGCGATGAAAGGTACGCATATCTTGAAAAGTCACCCTCTCTTCAATCTGCCTCGGCACCTTATTCTGTGACTTGTAAAGGCATTAGAAATTCTACATCAAGTAACAAGAGAACCAAAATGATGTAA

Protein sequence

MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLDRSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM
Homology
[Close]
BLAST of ClCG05G002360.1 vs. Swiss-Prot
Match: RA51C_ARATH (DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2)

HSP 1 Score: 500.4 bits (1287), Expect = 1.6e-140
Identity = 245/346 (70.81%), Postives = 299/346 (86.42%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           ME  RLP+S ++RGKLISAGYT LSS+ASVS SDLAR+  I++ EAFE+LK  +      
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQSC--- 81

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
               S ++++GA+ AWD+LH+E+ + RITTSC+DLDN+LGGG++  +VTEIGGVPGIGKT
Sbjct: 82  -CNGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKT 141

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           Q+GIQL+VNVQIP   GG+GGKA+YIDTEGSFMVERALQIAEAC+EDM +Y+  + K+  
Sbjct: 142 QIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQ 201

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
            +Q+Q++ +DILENI+YFRVCSYTEQIAL+N+L+KFI+E+KDVKVVIVDS+TFHFRQ++D
Sbjct: 202 ANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYD 261

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLA RTR+LSEMALK MKLAKKFSLAVVL NQVTTKF+EGSFQL LALGDSWSHSCTNR+
Sbjct: 262 DLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRV 321

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGDERYAY++KSPSL SASA Y+VT +G+RNS+SS+KR KMM
Sbjct: 322 ILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 363

[Close]
BLAST of ClCG05G002360.1 vs. Swiss-Prot
Match: RA51C_CRIGR (DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus GN=RAD51C PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 7.2e-72
Identity = 151/349 (43.27%), Postives = 222/349 (63.61%), Query Frame = 1 

Query: 2   EVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLDR 61
           E+   P+S T+R KL++AG+ T   +  V PS+L++E+ IS  EA E L+     S  D+
Sbjct: 4   ELVSFPLSPTVRVKLVAAGFQTAEDVLGVKPSELSKEVGISKEEALETLQIVRRESLTDK 63

Query: 62  SVRSSAIVDGAE-TAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 121
              + A V G + TA +LL +E     I T C+ LDN+LGGG+   + TE+ GVPG+GKT
Sbjct: 64  PRCAGASVAGKKYTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKT 123

Query: 122 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 181
           QL +QLAV+VQIP  FGGV G+AV+IDTEGSFMV+R + +A ACI+ +   +   K    
Sbjct: 124 QLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVTLANACIQHLHLIAGTHKDEE- 183

Query: 182 PHQIQIES---KDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQ 241
            HQ  +E    ++IL +IYYFR   YTE +A +  L  F++ H  V++VI+D +   FR 
Sbjct: 184 -HQKALEGFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRH 243

Query: 242 NFDDLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCT 301
           + DDL+LRTRLL+ +A +++ LA    LAV+L NQ+TTK  +    L  ALG+SW H+ T
Sbjct: 244 DLDDLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAAT 303

Query: 302 NRIILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNS--TSSNKRTK 345
            R+I +W   +R+A L KSPS + ++ P+ +T +G R++  T+S+ +T+
Sbjct: 304 IRLIFHWEQKQRFATLYKSPSQKESTIPFQITPQGFRDAAVTASSSQTE 350

[Close]
BLAST of ClCG05G002360.1 vs. Swiss-Prot
Match: RA51C_MOUSE (DNA repair protein RAD51 homolog 3 OS=Mus musculus GN=Rad51c PE=2 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.0e-69
Identity = 142/344 (41.28%), Postives = 220/344 (63.95%), Query Frame = 1 

Query: 7   PISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLDRS-VRS 66
           P+S  +RGKL++AG+ T   +  V PS+L++E+ IS  EA E L+        ++     
Sbjct: 9   PLSPAVRGKLVAAGFQTAEDVLEVKPSELSKEVGISKEEALETLQILRRECLTNKPRCAG 68

Query: 67  SAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQ 126
           +++ +   TA +LL +E     I T C+ LDN+LGGG+   + TE+ GVPG+GKTQL +Q
Sbjct: 69  TSVANEKCTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQ 128

Query: 127 LAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQ 186
           LAV+VQIP  FGGV G+AV+IDTEGSFMV+R + +A ACI+ +  + +        HQ  
Sbjct: 129 LAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHL--HLIAGTHTEEEHQKA 188

Query: 187 IES---KDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDL 246
           ++    ++IL +IYYFR   YTE +A +  L  F+++H  V++VI+D + F FR + +DL
Sbjct: 189 LKDFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDLEDL 248

Query: 247 ALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIIL 306
           +LRTRLL+ +A +++ LA    LAV+L NQ+TTK  +    L  ALG+SW H+ T R+I 
Sbjct: 249 SLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAATIRLIF 308

Query: 307 YWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNS--TSSNKRTK 345
           +W   +R+A L KSPS + ++ P+ +T +G R++  T+++ +T+
Sbjct: 309 HWEQKQRFATLYKSPSQKESTIPFQITPQGFRDAVVTAASSQTE 350

[Close]
BLAST of ClCG05G002360.1 vs. Swiss-Prot
Match: RA51C_HUMAN (DNA repair protein RAD51 homolog 3 OS=Homo sapiens GN=RAD51C PE=1 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 9.1e-67
Identity = 145/335 (43.28%), Postives = 205/335 (61.19%), Query Frame = 1 

Query: 7   PISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLDRSVRSS 66
           P+S  +R KL+SAG+ T   L  V PS+L++E+ IS  EA E L+       L    R +
Sbjct: 18  PLSPAVRVKLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQI-IRRECLTNKPRYA 77

Query: 67  AIVDGAE--TAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGI 126
              +  +  TA +LL +E     I T C+ LD++LGGGV   + TEI G PG+GKTQL +
Sbjct: 78  GTSESHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCM 137

Query: 127 QLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQI 186
           QLAV+VQIP  FGGV G+AV+IDTEGSFMV+R + +A ACI+ +    +  K     H+ 
Sbjct: 138 QLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQ--LIAEKHKGEEHRK 197

Query: 187 QIES---KDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDD 246
            +E     +IL +IYYFR   YTE +A +  L  F++EH  V++VIVD + F FR + DD
Sbjct: 198 ALEDFTLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDD 257

Query: 247 LALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRII 306
           L+LRTRLL+ +A +++ LA    LAV+L NQ+TTK       L  ALG+SW H+ T R+I
Sbjct: 258 LSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESWGHAATIRLI 317

Query: 307 LYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNS 337
            +W+  +R A L KSPS +  +  + +  +G R++
Sbjct: 318 FHWDRKQRLATLYKSPSQKECTVLFQIKPQGFRDT 349

[Close]
BLAST of ClCG05G002360.1 vs. Swiss-Prot
Match: RA51C_DICDI (DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum GN=rad51c PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 8.8e-54
Identity = 109/253 (43.08%), Postives = 161/253 (63.64%), Query Frame = 1 

Query: 86  SRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGVGGKAVY 145
           + I T C+++D +L GG    ++TEI GVPGIGKT +  QL VN  IP   GGV GKA+Y
Sbjct: 62  NNIITFCSEIDQMLNGGTPLKKITEICGVPGIGKTNMAFQLLVNTSIPFDLGGVQGKAIY 121

Query: 146 IDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIESKD-ILENIYYFRVCSYT 205
           IDTEGS+  +R  ++A   +  +     +L KN +     I + + +L +IYY+RV  Y 
Sbjct: 122 IDTEGSYSCQRVREMATHLVNHLE---CVLLKNPMTQTTYIPTVETVLNSIYYYRVYHYI 181

Query: 206 EQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFS 265
           E I+LI+ L  F+ ++KDVK+++VDS+T+ FR +F D+ LRTR L  +A  LM +A +++
Sbjct: 182 EIISLIHQLPLFLEKNKDVKLIVVDSITYPFRCDFKDMGLRTRSLLSLAQNLMNIATRYN 241

Query: 266 LAVVLFNQVTTKFAEGSFQLTLA--LGDSWSHSCTNRIILYWNGDERYAYLEKSPSLQSA 325
           LAVV+ NQVTTK +    +  L   LG+SW+H CT R++L+W   +R+ +L KSPS +S 
Sbjct: 242 LAVVVMNQVTTKISPNQKESILVPYLGESWTHICTYRMVLFWKQKQRFCHLYKSPSFKSC 301

Query: 326 SAPYSVTCKGIRN 336
             P+ +   GIR+
Sbjct: 302 FTPFDIVEYGIRD 311

[Close]
BLAST of ClCG05G002360.1 vs. TrEMBL
Match: A0A0A0L3U2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126250 PE=4 SV=1)

HSP 1 Score: 641.3 bits (1653), Expect = 6.6e-181
Identity = 326/346 (94.22%), Postives = 335/346 (96.82%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPSDLARELEIS+NEAF+VLK  SHG GLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           RS  S AIV+GAETAWD+LHKE+FI RITTSCADLDNLLGGG+N SEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIE KDILENI+YFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALK MKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGDERYAYLEKSPSLQSASAPYSVTC+GIRN TSSNKRTKMM
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 346

[Close]
BLAST of ClCG05G002360.1 vs. TrEMBL
Match: D7U7X0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00380 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 1.3e-144
Identity = 262/346 (75.72%), Postives = 304/346 (87.86%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           ME+ RLPISA+ RGKLISAGYT+LSSL+S+SPS LA++L+ISDNEA E+L+  S GS LD
Sbjct: 1   MELARLPISASQRGKLISAGYTSLSSLSSLSPSTLAQDLKISDNEALEILRVVSQGSRLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           +   S AIV+GA+TAWD+LH+E+ +  ITTSC DLD++LGGG+   EVTEIGGVPGIGKT
Sbjct: 61  KPDGSHAIVNGAQTAWDMLHEEESLKCITTSCVDLDDILGGGIKCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIP  +GG+GGKA+YIDTEGSFM+ER+LQIAEACIEDMS  S  L+K+  
Sbjct: 121 QLGIQLAVNVQIPVNYGGLGGKAIYIDTEGSFMLERSLQIAEACIEDMSGNSDFLQKDFQ 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
             Q++ + KD L+NI+YFRVCSYTEQIA+INYLDKFI+EHKDV VVI+DSVTFHFRQ+FD
Sbjct: 181 SCQVKAQPKDFLQNIFYFRVCSYTEQIAMINYLDKFISEHKDVNVVIIDSVTFHFRQDFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLS MALKLMKLAKKFSLAVVL NQVTTK  EGSFQLTLALGDSWSHSCTNR+
Sbjct: 241 DLALRTRLLSGMALKLMKLAKKFSLAVVLLNQVTTKHTEGSFQLTLALGDSWSHSCTNRV 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGDERYAY++KSPSL+SASAPYSVT KGIR +TS  KR K+M
Sbjct: 301 ILYWNGDERYAYIDKSPSLRSASAPYSVTGKGIRTATSKCKRIKIM 346

[Close]
BLAST of ClCG05G002360.1 vs. TrEMBL
Match: A0A061E1X4_THECC (RAS associated with diabetes protein 51C OS=Theobroma cacao GN=TCM_005534 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 5.4e-143
Identity = 257/348 (73.85%), Postives = 306/348 (87.93%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHG--SG 60
           ME+ RLPISA+ RGKLISAGYTTLSSL+S+S SDLARE ++S++EA ++LKF SH    G
Sbjct: 1   MEIWRLPISASQRGKLISAGYTTLSSLSSISSSDLARESKVSESEALDILKFASHSHSGG 60

Query: 61  LDRSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIG 120
            + S  + +I +GA+ AWD+LH+E+ +  ITTS ADLDN+LGGG++  EVTEIGGVPGIG
Sbjct: 61  WEMSSGNCSIFEGAQNAWDMLHEEESLVHITTSSADLDNILGGGIHCKEVTEIGGVPGIG 120

Query: 121 KTQLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKN 180
           KTQLGIQ+AVNVQIP  FGG+GGKA+YIDTEGSFMVERALQIAEACIEDMS+Y+  ++K+
Sbjct: 121 KTQLGIQIAVNVQIPHGFGGLGGKAIYIDTEGSFMVERALQIAEACIEDMSEYNRFIRKD 180

Query: 181 AIPHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQN 240
               +I+++ KDIL NI+YFR+CSYTEQIALINYLDKFI+EHKDVKVV+VDSVTFHFRQ+
Sbjct: 181 FQACEIRMQPKDILGNIFYFRICSYTEQIALINYLDKFISEHKDVKVVVVDSVTFHFRQD 240

Query: 241 FDDLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTN 300
           FDD+ALRTR+LS MALKLMKLAKKFSLAVVL NQVTTK  EGSFQL LALGDSWSH+CTN
Sbjct: 241 FDDMALRTRVLSGMALKLMKLAKKFSLAVVLLNQVTTKHTEGSFQLALALGDSWSHTCTN 300

Query: 301 RIILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           RI+LYWNG+ERYAY++KSPSL+SASA YSVT +GIRNS+SS KR KMM
Sbjct: 301 RIVLYWNGNERYAYIDKSPSLRSASAAYSVTRRGIRNSSSSCKRIKMM 348

[Close]
BLAST of ClCG05G002360.1 vs. TrEMBL
Match: W9RJ62_9ROSA (DNA repair protein RAD51-3-like protein OS=Morus notabilis GN=L484_025583 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 7.1e-143
Identity = 255/346 (73.70%), Postives = 304/346 (87.86%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           MEVGRLPISA+ RGKLI AGYTTLSSL+S+SPSDLAREL ++++EA E+LK  S  S LD
Sbjct: 1   MEVGRLPISASQRGKLIRAGYTTLSSLSSLSPSDLARELNVTNSEALEILKVASLNSRLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           R+    AI +GA+TAWD+LH+E+ + RITTSCADLDN+LGGG+N  EVTEIGGVPGIGKT
Sbjct: 61  RTDGGHAIFNGAQTAWDMLHEEQLLRRITTSCADLDNILGGGINCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIP   GG+GGKAVYIDTEGSFMVERALQIAEA + DM +Y+ LL+K   
Sbjct: 121 QLGIQLAVNVQIPVDLGGLGGKAVYIDTEGSFMVERALQIAEASVLDMVEYNDLLRKEHR 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
             Q+ ++  D+LE+IYYFR+CSYTEQ+A+I+YLDKFI+ HKDVK+VIVDSVTFHFRQ+F+
Sbjct: 181 KCQVNLKPNDLLESIYYFRICSYTEQMAVISYLDKFISAHKDVKIVIVDSVTFHFRQDFE 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLS MALKLM LAK ++LAVV+FNQVTTK+ EGSFQL LALGDSWSHSCTNR+
Sbjct: 241 DLALRTRLLSGMALKLMNLAKTYNLAVVIFNQVTTKYMEGSFQLALALGDSWSHSCTNRV 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGD+RYA+++KSPSL+SASAP+SVT KGIRNS S++KR K+M
Sbjct: 301 ILYWNGDDRYAFIDKSPSLRSASAPFSVTGKGIRNSASNHKRIKLM 346

[Close]
BLAST of ClCG05G002360.1 vs. TrEMBL
Match: A0A0D2PCX2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G162800 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 6.0e-142
Identity = 252/346 (72.83%), Postives = 303/346 (87.57%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           ME+ RLPISA+ RGKLIS+GYT+LSSL+S+S SDLAREL++S++EA  +LK  SH  G +
Sbjct: 1   MEIWRLPISASQRGKLISSGYTSLSSLSSISSSDLARELKVSESEAMNILKVASHSRGSE 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
            S  S +IV+GA++AWD+LH E+ +  ITTS ADLDN+LGGG++  EVTEIGGVPGIGKT
Sbjct: 61  TSNASCSIVEGAQSAWDMLHDEESLMHITTSSADLDNILGGGIHCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQ+AVNVQIP  FGG+GGKA+YIDTEGSFMVERA QIAEACIEDMS+Y+  L+K+  
Sbjct: 121 QLGIQIAVNVQIPNDFGGLGGKAIYIDTEGSFMVERAFQIAEACIEDMSEYNRFLRKDFQ 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
             +I++  +DILENI+YFR+CSYTEQIALINYLDKF++EHKDVKV++VDSVTFHFRQ+FD
Sbjct: 181 ECKIKMLPQDILENIFYFRICSYTEQIALINYLDKFLSEHKDVKVIVVDSVTFHFRQDFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           D+ALRTR+LS MALKLM LAK+FSLAVVL NQVTTK  E SFQL LALGDSWSH+CTNRI
Sbjct: 241 DMALRTRVLSGMALKLMNLAKRFSLAVVLLNQVTTKHTEASFQLALALGDSWSHTCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           +LYWNG+ERYAY++KSPSL+SASA YSVT +GIRNS+SS KR KMM
Sbjct: 301 VLYWNGNERYAYIDKSPSLRSASAAYSVTARGIRNSSSSCKRIKMM 346

[Close]
BLAST of ClCG05G002360.1 vs. TAIR10
Match: AT2G45280.2 (AT2G45280.2 RAS associated with diabetes protein 51C)

HSP 1 Score: 486.1 bits (1250), Expect = 1.8e-137
Identity = 245/370 (66.22%), Postives = 298/370 (80.54%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLAR----------------------- 60
           ME  RLP+S ++RGKLISAGYT LSS+ASVS SDLAR                       
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARGKFLLYPNLRRLESVARFSLIST 81

Query: 61  -ELEISDNEAFEVLKFGSHGSGLDRSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLD 120
               I++ EAFE+LK  +          S ++++GA+ AWD+LH+E+ + RITTSC+DLD
Sbjct: 82  DNANITEEEAFEILKLANQSC----CNGSRSLINGAKNAWDMLHEEESLPRITTSCSDLD 141

Query: 121 NLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVER 180
           N+LGGG++  +VTEIGGVPGIGKTQ+GIQL+VNVQIP   GG+GGKA+YIDTEGSFMVER
Sbjct: 142 NILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVER 201

Query: 181 ALQIAEACIEDMSDYSVLLKKNAIPHQIQIESKDILENIYYFRVCSYTEQIALINYLDKF 240
           ALQIAEAC+EDM +Y+  + K+   +Q+Q++ +DILENI+YFRVCSYTEQIAL+N+L+KF
Sbjct: 202 ALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKF 261

Query: 241 ITEHKDVKVVIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTK 300
           I+E+KDVKVVIVDS+TFHFRQ++DDLA RTR+LSEMALK MKLAKKFSLAVVL NQVTTK
Sbjct: 262 ISENKDVKVVIVDSITFHFRQDYDDLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTK 321

Query: 301 FAEGSFQLTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNS 347
           F+EGSFQL LALGDSWSHSCTNR+ILYWNGDERYAY++KSPSL SASA Y+VT +G+RNS
Sbjct: 322 FSEGSFQLALALGDSWSHSCTNRVILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNS 381

[Close]
BLAST of ClCG05G002360.1 vs. TAIR10
Match: AT3G22880.1 (AT3G22880.1 DNA repair (Rad51) family protein)

HSP 1 Score: 125.9 bits (315), Expect = 4.7e-29
Identity = 92/273 (33.70%), Postives = 138/273 (50.55%), Query Frame = 1 

Query: 71  GAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNV 130
           G  T  D L K K + +ITT C  LD+LLGGG+ +S +TE  G    GKTQL   L V  
Sbjct: 91  GYMTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTLCVTT 150

Query: 131 QIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIESKD 190
           Q+P    G  GK  YIDTEG+F  +R + IAE                    +  ++   
Sbjct: 151 QLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGMDPGA 210

Query: 191 ILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNF---DDLALRTR 250
           +L+NI Y R  +Y  Q  L+  L   ++E +  +++IVDS+   FR +F    +LA R +
Sbjct: 211 VLDNIIYARAYTYEHQYNLLLGLAAKMSE-EPFRILIVDSIIALFRVDFTGRGELADRQQ 270

Query: 251 LLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSF---QLTLALGDSWSHSCTNRIIL-Y 310
            L++M  +L+K+A++F++AV + NQV      G F       A G   +H+ T R++   
Sbjct: 271 KLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATIRLLFRK 330

Query: 311 WNGDERYAYLEKSPSLQSASAPYSVTCKGIRNS 337
             GD R   +  +P+L  A A + +T  GI ++
Sbjct: 331 GKGDTRVCKVYDAPNLAEAEASFQITQGGIADA 342

[Close]
BLAST of ClCG05G002360.1 vs. TAIR10
Match: AT5G20850.1 (AT5G20850.1 RAS associated with diabetes protein 51)

HSP 1 Score: 114.0 bits (284), Expect = 1.8e-25
Identity = 97/328 (29.57%), Postives = 153/328 (46.65%), Query Frame = 1 

Query: 15  KLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLDRSVRSSAIVDGAET 74
           KL  AG  T+  +A     DL +   ISD +  ++++             S  +  G  +
Sbjct: 43  KLRDAGLCTVEGVAYTPRKDLLQIKGISDAKVDKIVE-----------AASKLVPLGFTS 102

Query: 75  AWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNVQIPG 134
           A  L  + + I +IT+   +LD +L GG+ +  +TE+ G    GKTQL   L V  Q+P 
Sbjct: 103 ASQLHAQRQEIIQITSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPM 162

Query: 135 AFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIESKDILEN 194
             GG  GKA+YID EG+F  +R LQIA+                    +  +   D+LEN
Sbjct: 163 DQGGGEGKAMYIDAEGTFRPQRLLQIAD--------------------RFGLNGADVLEN 222

Query: 195 IYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD---DLALRTRLLSE 254
           + Y R  +   Q  L+      + E +   ++IVDS T  +R +F    +L+ R   L++
Sbjct: 223 VAYARAYNTDHQSRLLLEAASMMIETR-FALLIVDSATALYRTDFSGRGELSARQMHLAK 282

Query: 255 MALKLMKLAKKFSLAVVLFNQVTTKFAEGSF-----QLTLALGDSWSHSCTNRIIL-YWN 314
               L KLA +F +AVV+ NQV  +  +GS      Q     G+  +H+ T R+ L    
Sbjct: 283 FLRSLQKLADEFGVAVVITNQVVAQ-VDGSALFAGPQFKPIGGNIMAHATTTRLALRKGR 337

Query: 315 GDERYAYLEKSPSLQSASAPYSVTCKGI 334
            +ER   +  SP L  A A + ++ +G+
Sbjct: 343 AEERICKVISSPCLPEAEARFQISTEGV 337

[Close]
BLAST of ClCG05G002360.1 vs. TAIR10
Match: AT5G57450.1 (AT5G57450.1 homolog of X-ray repair cross complementing 3 (XRCC3))

HSP 1 Score: 95.1 bits (235), Expect = 8.9e-20
Identity = 65/205 (31.71%), Postives = 104/205 (50.73%), Query Frame = 1 

Query: 77  DLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAF 136
           +LL +     ++TT C  LD  L GG++   +TEI    G GKTQL +QL++  Q+P + 
Sbjct: 10  NLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPISH 69

Query: 137 GGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIESKDILENIY 196
           GG+ G ++Y+ +E  F   R  Q++       S+ S+    N  P           ++++
Sbjct: 70  GGLNGSSLYLHSEFPFPFRRLHQLSHTF--HQSNPSIYANYNDNP----------CDHVF 129

Query: 197 YFRVCSYTEQIALINYLDKFITEHK---DVKVVIVDSVTFHFRQNFD----DLALRTRLL 256
              V S      ++  +D F+   K    +K++++DSV   FR  FD    DL  R+ L 
Sbjct: 130 VQNVHSVDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLF 189

Query: 257 SEMALKLMKLAKKFSLAVVLFNQVT 275
            +++ KL +LA KF LA+V+ NQVT
Sbjct: 190 FKISGKLKQLASKFDLAIVITNQVT 202

[Close]
BLAST of ClCG05G002360.1 vs. TAIR10
Match: AT2G28560.1 (AT2G28560.1 DNA repair (Rad51) family protein)

HSP 1 Score: 90.9 bits (224), Expect = 1.7e-18
Identity = 85/339 (25.07%), Postives = 147/339 (43.36%), Query Frame = 1 

Query: 21  YTTLSSLASVSPSDLARE-LEISDNEAFEVLKFGSHGSGLDRSVRSSAIVDGAETAWDLL 80
           +T +S++ +      A++ L +++ E  E+L  G        S  S A     ++A  LL
Sbjct: 12  HTKISNIFAARNIITAKDALSMTEFELMELLDVGMKEIRSAISFISEATSPPCQSARSLL 71

Query: 81  HK----EKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGA 140
            K    E     + T    LD+ L GG+    +TE+ G PGIGK+Q  ++LA++   P A
Sbjct: 72  EKKVENEHLSGHLPTHLKGLDDTLCGGIPFGVLTELVGPPGIGKSQFCMKLALSASFPVA 131

Query: 141 FGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIESKDILENI 200
           +GG+ G+ +YID E  F   R +++      ++               ++  ++++   I
Sbjct: 132 YGGLDGRVIYIDVESKFSSRRVIEMGLESFPEV-------------FHLKGMAQEMAGRI 191

Query: 201 YYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLALRTRLLSEMALK 260
              R  S       I  L   I +++ VK++++DS+T          A R   L      
Sbjct: 192 LVLRPTSLANFTESIQELKNSILQNQ-VKLLVIDSMTALLSGENKPGAQRQPQLGWHISF 251

Query: 261 LMKLAKKFSLAVVLFNQVTT----KFAEGSFQ-----------------LTLALGDSWSH 320
           L  LA+   + +V+ NQV +    + ++ SFQ                 L  ALG +W+H
Sbjct: 252 LKSLAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKDNTKTYDSHLVAALGINWAH 311

Query: 321 SCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCKGI 334
           + T R++L     +R   + KSP     + P+ +T  GI
Sbjct: 312 AVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGI 336

[Close]
BLAST of ClCG05G002360.1 vs. NCBI nr
Match: gi|659075500|ref|XP_008438178.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis melo])

HSP 1 Score: 642.5 bits (1656), Expect = 4.2e-181
Identity = 327/346 (94.51%), Postives = 337/346 (97.40%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPS+LARELEIS+NEAFEVLK  SHG GLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           RS  S AIV+GAETAWD+LHKE+FI RITTSCADLDNLLGGG+N SEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIE K+ILENI+YFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGDERYAYLEKSPSLQSASAPYSVTC+GIRNSTSSNKRTKMM
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMM 346

[Close]
BLAST of ClCG05G002360.1 vs. NCBI nr
Match: gi|449432271|ref|XP_004133923.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 641.3 bits (1653), Expect = 9.4e-181
Identity = 326/346 (94.22%), Postives = 335/346 (96.82%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPSDLARELEIS+NEAF+VLK  SHG GLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           RS  S AIV+GAETAWD+LHKE+FI RITTSCADLDNLLGGG+N SEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIE KDILENI+YFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALK MKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGDERYAYLEKSPSLQSASAPYSVTC+GIRN TSSNKRTKMM
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 346

[Close]
BLAST of ClCG05G002360.1 vs. NCBI nr
Match: gi|659075498|ref|XP_008438177.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis melo])

HSP 1 Score: 635.6 bits (1638), Expect = 5.2e-179
Identity = 327/353 (92.63%), Postives = 337/353 (95.47%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPS+LARELEIS+NEAFEVLK  SHG GLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           RS  S AIV+GAETAWD+LHKE+FI RITTSCADLDNLLGGG+N SEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIE K+ILENI+YFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLA-------VVLFNQVTTKFAEGSFQLTLALGDSWS 300
           DLALRTRLLSEMALKLMKLAKKFSLA       VVLFNQVTTKFAEGSFQLTLALGDSWS
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVRINHLVVVLFNQVTTKFAEGSFQLTLALGDSWS 300

Query: 301 HSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           HSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTC+GIRNSTSSNKRTKMM
Sbjct: 301 HSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMM 353

[Close]
BLAST of ClCG05G002360.1 vs. NCBI nr
Match: gi|778677460|ref|XP_011650791.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 632.1 bits (1629), Expect = 5.7e-178
Identity = 324/346 (93.64%), Postives = 333/346 (96.24%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPSDLARELEIS+NEAF+VLK  SHG GLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           RS  S AIV+GAETAWD+LHKE+FI RITTSCADLDNLLGGG+N SEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYI  EGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYI--EGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIE KDILENI+YFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALK MKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGDERYAYLEKSPSLQSASAPYSVTC+GIRN TSSNKRTKMM
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 344

[Close]
BLAST of ClCG05G002360.1 vs. NCBI nr
Match: gi|1009142354|ref|XP_015888679.1| (PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 525.4 bits (1352), Expect = 7.5e-146
Identity = 258/346 (74.57%), Postives = 305/346 (88.15%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           MEVGRLPISA+ RGKLISAGYT+LSSL+S+SPSDLA++L I ++EA E+LK  S  S LD
Sbjct: 1   MEVGRLPISASQRGKLISAGYTSLSSLSSLSPSDLAKDLNIPESEALEILKVASLTSRLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           +   + A V+GA+TAWD+LH+E+   RITTSCAD+D +LGGG+N  EVTEIGGVPGIGKT
Sbjct: 61  KQDGNHAFVNGAQTAWDMLHEEQLFPRITTSCADMDEILGGGINCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIP  +GG+GGKA+YIDTEGSFMVERA QIAEAC+ DMS+Y+ LL+K   
Sbjct: 121 QLGIQLAVNVQIPVEYGGLGGKAIYIDTEGSFMVERAQQIAEACVVDMSEYNDLLRKGNR 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
             Q++I+  DILENI+YFR+CSYTEQIALINYLD+FI+EHKDVK+VIVDSVTFHFRQ+FD
Sbjct: 181 ACQVRIQPNDILENIFYFRICSYTEQIALINYLDRFISEHKDVKIVIVDSVTFHFRQDFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLL  MALKLM LA+ +SLAVV+FNQVTTK+ EGSFQL LALGDSWSHSCTNR+
Sbjct: 241 DLALRTRLLGGMALKLMNLARNYSLAVVIFNQVTTKYTEGSFQLALALGDSWSHSCTNRV 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGDERYAY++KSPSL+SASAP+SVT KGIRNS S++KR +MM
Sbjct: 301 ILYWNGDERYAYIDKSPSLRSASAPFSVTSKGIRNSASNHKRIRMM 346

The following BLAST results are available for this feature:
BLAST of ClCG05G002360.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RA51C_ARATH1.6e-14070.81DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2[more]
RA51C_CRIGR7.2e-7243.27DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus GN=RAD51C PE=2 SV=1[more]
RA51C_MOUSE2.0e-6941.28DNA repair protein RAD51 homolog 3 OS=Mus musculus GN=Rad51c PE=2 SV=1[more]
RA51C_HUMAN9.1e-6743.28DNA repair protein RAD51 homolog 3 OS=Homo sapiens GN=RAD51C PE=1 SV=1[more]
RA51C_DICDI8.8e-5443.08DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum GN=rad51c PE=3 SV... [more]
BLAST of ClCG05G002360.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3U2_CUCSA6.6e-18194.22Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126250 PE=4 SV=1[more]
D7U7X0_VITVI1.3e-14475.72Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00380 PE=4 SV=... [more]
A0A061E1X4_THECC5.4e-14373.85RAS associated with diabetes protein 51C OS=Theobroma cacao GN=TCM_005534 PE=4 S... [more]
W9RJ62_9ROSA7.1e-14373.70DNA repair protein RAD51-3-like protein OS=Morus notabilis GN=L484_025583 PE=4 S... [more]
A0A0D2PCX2_GOSRA6.0e-14272.83Uncharacterized protein OS=Gossypium raimondii GN=B456_004G162800 PE=4 SV=1[more]
BLAST of ClCG05G002360.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G45280.21.8e-13766.22 RAS associated with diabetes protein 51C[more]
AT3G22880.14.7e-2933.70 DNA repair (Rad51) family protein[more]
AT5G20850.11.8e-2529.57 RAS associated with diabetes protein 51[more]
AT5G57450.18.9e-2031.71 homolog of X-ray repair cross complementing 3 (XRCC3)[more]
AT2G28560.11.7e-1825.07 DNA repair (Rad51) family protein[more]
BLAST of ClCG05G002360.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075500|ref|XP_008438178.1|4.2e-18194.51PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis melo][more]
gi|449432271|ref|XP_004133923.1|9.4e-18194.22PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis sativus][more]
gi|659075498|ref|XP_008438177.1|5.2e-17992.63PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis melo][more]
gi|778677460|ref|XP_011650791.1|5.7e-17893.64PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis sativus][more]
gi|1009142354|ref|XP_015888679.1|7.5e-14674.57PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013632DNA_recomb/repair_Rad51_C
IPR016467DNA_recomb/repair_RecA-like
IPR020588RecA_ATP-bd
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
GO:0008094DNA-dependent ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0008094 DNA-dependent ATPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
ClCG05G002360ClCG05G002360gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
ClCG05G002360.1ClCG05G002360.1-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG05G002360.1.three_prime_UTR1ClCG05G002360.1.three_prime_UTR1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG05G002360.1.cds9ClCG05G002360.1.cds9CDS
ClCG05G002360.1.cds8ClCG05G002360.1.cds8CDS
ClCG05G002360.1.cds7ClCG05G002360.1.cds7CDS
ClCG05G002360.1.cds6ClCG05G002360.1.cds6CDS
ClCG05G002360.1.cds5ClCG05G002360.1.cds5CDS
ClCG05G002360.1.cds4ClCG05G002360.1.cds4CDS
ClCG05G002360.1.cds3ClCG05G002360.1.cds3CDS
ClCG05G002360.1.cds2ClCG05G002360.1.cds2CDS
ClCG05G002360.1.cds1ClCG05G002360.1.cds1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
ClCG05G002360.1.five_prime_UTR1ClCG05G002360.1.five_prime_UTR1five_prime_UTR


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013632DNA recombination and repair protein Rad51, C-terminalPFAMPF08423Rad51coord: 72..335
score: 3.6
IPR016467DNA recombination and repair protein, RecA-likePIRPIRSF005856Rad51coord: 1..339
score: 1.6
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROFILEPS50162RECA_2coord: 84..273
score: 54
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 85..335
score: 9.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 86..334
score: 2.38
NoneNo IPR availableGENE3DG3DSA:1.10.150.20coord: 8..47
score: 4.
NoneNo IPR availablePANTHERPTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERcoord: 1..342
score: 7.1E
NoneNo IPR availablePANTHERPTHR22942:SF14DNA REPAIR PROTEIN RAD51 HOMOLOG 3coord: 1..342
score: 7.1E