Cla008868.1 (mRNA) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGAGAAGAGATCACCAATGGCGTTCCGCCTGAAGAAGGCATTCACGAAACTCACTGCATTTGTCCGCCTCTGCCTCGTTCGTCGGCAACGTTCCCAACGGCTGAGATCATTCGTTTCCGACGATCGGACGGTAGGCATACGGATTGTCTTGGAAGATCAGAGGAGAATCGCTGAGAATTCTTCTGCGAGAAAGCTTGAACGTGCTTCGAGTTCAAGATACGGAAGCGATGAAGACGATGTCGATCAACGAGCGGAGATGTTCATTGATAATTTCCGCCGTCAATTGAGGTTAGAAAGACAAATTTCTTTGCAATTAAGGTATTATAGAGTTAATAGCTACGAAACAGAGCACGAAGAGAGATCGTCGCCGGACGCAGCCGGTTAA ATGGCTGAGAAGAGATCACCAATGGCGTTCCGCCTGAAGAAGGCATTCACGAAACTCACTGCATTTGTCCGCCTCTGCCTCGTTCGTCGGCAACGTTCCCAACGGCTGAGATCATTCGTTTCCGACGATCGGACGGTAGGCATACGGATTGTCTTGGAAGATCAGAGGAGAATCGCTGAGAATTCTTCTGCGAGAAAGCTTGAACGTGCTTCGAGTTCAAGATACGGAAGCGATGAAGACGATGTCGATCAACGAGCGGAGATGTTCATTGATAATTTCCGCCGTCAATTGAGGTTAGAAAGACAAATTTCTTTGCAATTAAGGTATTATAGAGTTAATAGCTACGAAACAGAGCACGAAGAGAGATCGTCGCCGGACGCAGCCGGTTAA ATGGCTGAGAAGAGATCACCAATGGCGTTCCGCCTGAAGAAGGCATTCACGAAACTCACTGCATTTGTCCGCCTCTGCCTCGTTCGTCGGCAACGTTCCCAACGGCTGAGATCATTCGTTTCCGACGATCGGACGGTAGGCATACGGATTGTCTTGGAAGATCAGAGGAGAATCGCTGAGAATTCTTCTGCGAGAAAGCTTGAACGTGCTTCGAGTTCAAGATACGGAAGCGATGAAGACGATGTCGATCAACGAGCGGAGATGTTCATTGATAATTTCCGCCGTCAATTGAGGTTAGAAAGACAAATTTCTTTGCAATTAAGGTATTATAGAGTTAATAGCTACGAAACAGAGCACGAAGAGAGATCGTCGCCGGACGCAGCCGGTTAA MAEKRSPMAFRLKKAFTKLTAFVRLCLVRRQRSQRLRSFVSDDRTVGIRIVLEDQRRIAENSSARKLERASSSRYGSDEDDVDQRAEMFIDNFRRQLRLERQISLQLRYYRVNSYETEHEERSSPDAAG
BLAST of Cla008868 vs. TrEMBL
Match: A0A0A0L4Z8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G004530 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 6.9e-43 Identity = 97/124 (78.23%), Postives = 109/124 (87.90%), Query Frame = 1
BLAST of Cla008868 vs. TrEMBL
Match: A0A0A0L6A3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G004520 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.1e-19 Identity = 67/124 (54.03%), Postives = 80/124 (64.52%), Query Frame = 1
BLAST of Cla008868 vs. TrEMBL
Match: B9ILG0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s03620g PE=4 SV=2) HSP 1 Score: 77.8 bits (190), Expect = 1.1e-11 Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 1
BLAST of Cla008868 vs. TrEMBL
Match: V4WAP0_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10010310mg PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 7.0e-11 Identity = 53/123 (43.09%), Postives = 70/123 (56.91%), Query Frame = 1
BLAST of Cla008868 vs. TrEMBL
Match: A0A0D2SRH1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G122600 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 7.0e-11 Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 1
BLAST of Cla008868 vs. NCBI nr
Match: gi|700200554|gb|KGN55687.1| (hypothetical protein Csa_3G004530 [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 9.9e-43 Identity = 97/124 (78.23%), Postives = 109/124 (87.90%), Query Frame = 1
BLAST of Cla008868 vs. NCBI nr
Match: gi|778688278|ref|XP_011652707.1| (PREDICTED: uncharacterized protein LOC105435054 [Cucumis sativus]) HSP 1 Score: 169.1 bits (427), Expect = 5.1e-39 Identity = 91/117 (77.78%), Postives = 102/117 (87.18%), Query Frame = 1
BLAST of Cla008868 vs. NCBI nr
Match: gi|700200553|gb|KGN55686.1| (hypothetical protein Csa_3G004520 [Cucumis sativus]) HSP 1 Score: 104.4 bits (259), Expect = 1.5e-19 Identity = 67/124 (54.03%), Postives = 80/124 (64.52%), Query Frame = 1
BLAST of Cla008868 vs. NCBI nr
Match: gi|764644842|ref|XP_011457409.1| (PREDICTED: uncharacterized protein LOC105349439 [Fragaria vesca subsp. vesca]) HSP 1 Score: 78.6 bits (192), Expect = 9.1e-12 Identity = 51/121 (42.15%), Postives = 73/121 (60.33%), Query Frame = 1
BLAST of Cla008868 vs. NCBI nr
Match: gi|566214045|ref|XP_002324391.2| (hypothetical protein POPTR_0018s03620g [Populus trichocarpa]) HSP 1 Score: 77.8 bits (190), Expect = 1.5e-11 Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
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