ClCG06G009960 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTCTTGGATTTCAAGAAGCCGAGAAGAGGGGAGTTCCGAATCGCGACGATTTCCTCAATTTGCAGCAACGGACTCAACACCATTGTTATTTCATGGATGGAACAACCTCTAATAATTCCAATTACAGTTCCGATTCCACCAATAGGATTTCCTATTACGCCGCCGCCGCCGCACAACATCGCCGGAAGATCGAGTACACGCGGTCTCTATCGCAGGGGTCACCGCGACGGTTGGTGCCGGCGGCGAGTTATTTAGGGGTGCTGCTGTGCTTGGCGGCGTCGTTGTTGATTCTTCCGTTGGTTCTTCCGCCTCTGCCGCCGCCGCCGTTGATGCTGTTGCTGCTTCTGCCGATTGGGATTTTGGGAATGCTTATGGTGTTAGCGTTTATGCCTTCTAATGATACCAAGGAAATCACTTCCTCTTCTCATACATATATGTAA ATGACTCTTGGATTTCAAGAAGCCGAGAAGAGGGGAGTTCCGAATCGCGACGATTTCCTCAATTTGCAGCAACGGACTCAACACCATTGTTATTTCATGGATGGAACAACCTCTAATAATTCCAATTACAGTTCCGATTCCACCAATAGGATTTCCTATTACGCCGCCGCCGCCGCACAACATCGCCGGAAGATCGAGTACACGCGGTCTCTATCGCAGGGGTCACCGCGACGGTTGGTGCCGGCGGCGAGTTATTTAGGGGTGCTGCTGTGCTTGGCGGCGTCGTTGTTGATTCTTCCGTTGGTTCTTCCGCCTCTGCCGCCGCCGCCGTTGATGCTGTTGCTGCTTCTGCCGATTGGGATTTTGGGAATGCTTATGGTGTTAGCGTTTATGCCTTCTAATGATACCAAGGAAATCACTTCCTCTTCTCATACATATATGTAA ATGACTCTTGGATTTCAAGAAGCCGAGAAGAGGGGAGTTCCGAATCGCGACGATTTCCTCAATTTGCAGCAACGGACTCAACACCATTGTTATTTCATGGATGGAACAACCTCTAATAATTCCAATTACAGTTCCGATTCCACCAATAGGATTTCCTATTACGCCGCCGCCGCCGCACAACATCGCCGGAAGATCGAGTACACGCGGTCTCTATCGCAGGGGTCACCGCGACGGTTGGTGCCGGCGGCGAGTTATTTAGGGGTGCTGCTGTGCTTGGCGGCGTCGTTGTTGATTCTTCCGTTGGTTCTTCCGCCTCTGCCGCCGCCGCCGTTGATGCTGTTGCTGCTTCTGCCGATTGGGATTTTGGGAATGCTTATGGTGTTAGCGTTTATGCCTTCTAATGATACCAAGGAAATCACTTCCTCTTCTCATACATATATGTAA MTLGFQEAEKRGVPNRDDFLNLQQRTQHHCYFMDGTTSNNSNYSSDSTNRISYYAAAAAQHRRKIEYTRSLSQGSPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKEITSSSHTYM
BLAST of ClCG06G009960 vs. Swiss-Prot
Match: ARL_ARATH (ARGOS-like protein OS=Arabidopsis thaliana GN=ARL PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.0e-19 Identity = 64/138 (46.38%), Postives = 90/138 (65.22%), Query Frame = 1
BLAST of ClCG06G009960 vs. Swiss-Prot
Match: ARGOS_BRARP (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis GN=ARGOS PE=2 SV=2) HSP 1 Score: 77.8 bits (190), Expect = 1.1e-13 Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 1
BLAST of ClCG06G009960 vs. Swiss-Prot
Match: ARGOS_ARATH (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana GN=ARGOS PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 5.5e-13 Identity = 55/134 (41.04%), Postives = 73/134 (54.48%), Query Frame = 1
BLAST of ClCG06G009960 vs. Swiss-Prot
Match: ARGOS_ORYSJ (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japonica GN=ARGOS PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.8e-09 Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 1
BLAST of ClCG06G009960 vs. Swiss-Prot
Match: ORS1_ARATH (Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana GN=ORS1 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 3.8e-06 Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 1
BLAST of ClCG06G009960 vs. TrEMBL
Match: A0A0A0LHQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123610 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 2.2e-61 Identity = 126/147 (85.71%), Postives = 136/147 (92.52%), Query Frame = 1
BLAST of ClCG06G009960 vs. TrEMBL
Match: R0FYH8_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024269mg PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.7e-19 Identity = 63/134 (47.01%), Postives = 88/134 (65.67%), Query Frame = 1
BLAST of ClCG06G009960 vs. TrEMBL
Match: A0A061ERG1_THECC (Auxin-regulated gene involved in organ size OS=Theobroma cacao GN=TCM_021527 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 3.6e-19 Identity = 61/120 (50.83%), Postives = 79/120 (65.83%), Query Frame = 1
BLAST of ClCG06G009960 vs. TrEMBL
Match: B9HGA4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s00290g PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 2.3e-18 Identity = 57/83 (68.67%), Postives = 67/83 (80.72%), Query Frame = 1
BLAST of ClCG06G009960 vs. TrEMBL
Match: A0A067K392_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19251 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.2e-18 Identity = 69/153 (45.10%), Postives = 96/153 (62.75%), Query Frame = 1
BLAST of ClCG06G009960 vs. TAIR10
Match: AT2G44080.1 (AT2G44080.1 ARGOS-like) HSP 1 Score: 96.3 bits (238), Expect = 1.7e-20 Identity = 64/138 (46.38%), Postives = 90/138 (65.22%), Query Frame = 1
BLAST of ClCG06G009960 vs. TAIR10
Match: AT3G59900.1 (AT3G59900.1 auxin-regulated gene involved in organ size) HSP 1 Score: 75.5 bits (184), Expect = 3.1e-14 Identity = 55/134 (41.04%), Postives = 73/134 (54.48%), Query Frame = 1
BLAST of ClCG06G009960 vs. TAIR10
Match: AT2G41230.1 (AT2G41230.1 unknown protein) HSP 1 Score: 52.8 bits (125), Expect = 2.1e-07 Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 1
BLAST of ClCG06G009960 vs. NCBI nr
Match: gi|700206331|gb|KGN61450.1| (hypothetical protein Csa_2G123610 [Cucumis sativus]) HSP 1 Score: 243.0 bits (619), Expect = 3.2e-61 Identity = 126/147 (85.71%), Postives = 136/147 (92.52%), Query Frame = 1
BLAST of ClCG06G009960 vs. NCBI nr
Match: gi|659082120|ref|XP_008441681.1| (PREDICTED: ARGOS-like protein [Cucumis melo]) HSP 1 Score: 238.8 bits (608), Expect = 6.0e-60 Identity = 124/147 (84.35%), Postives = 134/147 (91.16%), Query Frame = 1
BLAST of ClCG06G009960 vs. NCBI nr
Match: gi|727472049|ref|XP_010517992.1| (PREDICTED: ARGOS-like protein [Camelina sativa]) HSP 1 Score: 109.8 bits (273), Expect = 4.2e-21 Identity = 69/139 (49.64%), Postives = 94/139 (67.63%), Query Frame = 1
BLAST of ClCG06G009960 vs. NCBI nr
Match: gi|727449330|ref|XP_010506314.1| (PREDICTED: ARGOS-like protein [Camelina sativa]) HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19 Identity = 65/140 (46.43%), Postives = 95/140 (67.86%), Query Frame = 1
BLAST of ClCG06G009960 vs. NCBI nr
Match: gi|727453027|ref|XP_010508344.1| (PREDICTED: ARGOS-like protein [Camelina sativa]) HSP 1 Score: 103.6 bits (257), Expect = 3.0e-19 Identity = 67/146 (45.89%), Postives = 93/146 (63.70%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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