ClCG06G003980 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAATAGTAACCAACTCCATGATTTGGTAGAAGCCATCTCTGTCCTCACCGAGACTTTCGATGACACGTTTGACCTCAAATTCTCACAGTCAAGGTTCTCTATAATGGCGGCTACATCACCTTCGTCTCGTTGCATTTTAGCACTACAATTATCCCCTAGTTTCTTCGATGTATATGCTTGCAACAAACTTGAGTATAAACTTGTTTACATCCAAAACTTTTATCATACTAAGTTCAATCTCCAACGCAATGGTTTTACTGAGTTGGGTTTCGCTTGTTTTGATTCTGACCAAGAGCCTGGTTTGTACTCTTTTTTCCATTTTCTTTATTCTATTTCTATTATATTCTTCTTTCTTTATTATCTCCATAGCTTTGAAATAAACAATCTTTTATCTTTCTTCATATTTTAGGTTCGTTTCATAATCATCTTTTCATTTCATTTTCAAATTGTTGTATTTCTTGATTTTCACATTTCTTGACATTGAATTCTTAGTCTTTTCTCCAAACAAATTTCTTGAAAAATACATTTTTTTTCTTAGTTTTCAAAAGTTTACTTGGCTGATCTTGCATAAACGTTGGTGTTTATAAACTTATTTTCAAAAATAAAAAATTAGGATGACCTTGTTTTTAATTATTTGGTTTTTGATTTTTGATTTTTGAAATTTTTTGCTTGTTTTCCTTTTAACTTCCTTGTCATGGTTTTAAATTTTCAATTTTGATACTTCCTTCTCTTTTATGTTCGTAAGATTTGAAATTACCTTTCTTCATAATTTAGGTTTTCTTTGGTAATGATTTTTTTAAAACTTGATCTTGAAATTTTTTATACTTGTTTTTCTCTTAAAATTCAATGCCATGATTTTTGCATTTCACTTGTTTTTCTCTTAAAATTCTATGCCATGATTTTTGCATTTCTTGAAGAGACATTGAATTCTTAGTCATTTTTCCTTTTTTTTTTTTTTAAAGAAAGATAGTTCTTTTTTTTCAAAATCTGCCTTAATTCTTGAAAAGTTGGTGAAAATTAATTAATAAAACAACAAAACTTACGAGTGAAAGTAGTGTCTATAAAATTAATTTTTTTAAAAAAAAAATAGTTTTTTTTTTTCAAAATCTGCCTTAAGTCTTGAAAAGTTGGTGAAAATTAATTAATAAAACAACAAAACTTACGAGTGAAAGTAGTGTCTATAAAATTAATTTTTTTAAAAAAAAAAAAAAAAAAAAAACTAAGATGATCCTAGTTTTATAACCATGTCGATTTTATACTTTTGATAATTATGCTTGTTTACAACTTCTTTGACATAGCTTTCATTGTCATATATGGTTTGATATTTAAAAACATTAGTGAAACGAGATAGATATAAGAAATCAATAGATATAGGTGGTGTTTATAAATATTTAGCTAACAAAGCCTTAATAATCATTTTAAGCTTTTAACGAATTCACAATAGCTAATTAGACCTTGAATTTTGTGGCCATTCAAAATTTCGTCCGTTTTTATTAATTGACCATCTCTCTTCAGGATACCAAGCTCGAAATGATATCCGGATGCTTCTTGATATTGATGAAGATGGTTTGTAATGTCTAACTTGATTCAATTTCGATTATTCCTTCTTTATTATGTTATACATTTGAAATAACAATCTTACCTTTCTCCATAATTTAGGTCGTTTGATAATGATATATTTTAATTTGATTTTGAAATTTATATACTTCTTGGTTTTAACTTTTTCTTGAAGAAATATTGAATTTTTAGTCCTTTTTTACAACAAGTTTTTTTAGTTTCCAAAATTTGGTTGGGTTCTTAAAAACATTGGTAAAATTTGGTTAACAAAACAACAAAGCTTATGTAGAATCTATTAGCTTAATTTTAAAAAATAAAAAGTAAAAAAACTAGAACGACCCTATTTCATAACTATCTGGTTTTCGATTTTTTTTAAAAAGCTATTATGCTTCTTTTCTTACAATTCCTCTATTATGATTTTCATTTTCACATATTGTTTTTAGTTATCAAAATATTGTTTTATAAGCTTAATTTTCAAAAATCGAAAACTAAAACTAAGGTCTCGTTTGGTAACCATTTGGTTTTTGGTTTTTGAAAATTAAGACTATTTCCTTCACATTTTTTTTTATAATGATTTGCATATTTCTTAACTACAATGGTTGAATTCTAAGTAAAATTCCAAAAACAAAACTAAGTTTTCAAAAACTATATATTTTTTTTTGTTTTTAAATTTTGGCTTGATTTTTTAAACTATTGGGCCTAAATAGTTACCAAATGGCGCTTAAATGGTTATGGGTTAAAATTTTTTTTAACAAATTCACACAAATTAATTAGACCTTTAATTTGATTGACATTAAAATTTTCATTGGTTTTTATTCATTGACCATCTGTCTTCAGGATACCTAGATCGAAATGCGGTTCGAATCTTTGCTAATCCTGAAGCTGGTTTGTAATTACTTACTTGAGCCATTTGAATTGATTCTTTAATTTTGAATTAATTAGAATCTCATTTAATTTTCTAATTTCCCTTTTTGGGATCTTTCTTTTAGGTACTTATGAGAGAAATGATCTACCATTTTGTGCTTCGACTGATAGGATGGACGATACTTTCGAATTTGATTGTGCAAATTTTGTCTCCATTGAATCACAAGAGTTCATAAACATTATCACACGGTTTAGTAATTTTGATAATGGTAATAATATAATTGTAACTCAACAATTCTTCCCTTCACATACTATTTTGAAAGAAATTAAGTAGTTCAATGTTTTGTGATCTTGTTACAGTTCTTGTTACTCTATCAAGTTCACAAGTCAAGTTCTCTTATGGAAGCACACAGATTTTTCTAACTAAAGAGGTAAATATTTGGGTCTCTTTTGATGTTTAGGAAATTATTAATTAGACCATTGATTTTATAGACATGTTTGAAGATTAATGGTAGAGTGTAATGCTTGAAATAGTTAAAATTTTAATTGTTACAAGTGAATCAATTTTAACTCTTGTTTAATATTTACTTTGAAAATCCTTCATGCATCTATTCACTTACATGTGTATAGAGAATTCTTCAAACGTTGGATTACCAATATGGACGATTAGGAAAGTTTGATACAATGTTATATGCAGGAAAACCAATGCATTATTGGAGGTATTGGAGAGAGTGATCAAATTATTTTTGCAATAACTCTCCAACCAACGGAATTATTTAGCAATTTTGTAAGTCGATCCAAAAGGGTATGGTTATTCAAATCAAATAATTCACTTAAAGGTGTAATAGCTGCCCCTTTAGGATTGTATGCTCGATATGTGGCCTATTTTCCTTATAGGAGATAA ATGGTTAATAGTAACCAACTCCATGATTTGGTAGAAGCCATCTCTGTCCTCACCGAGACTTTCGATGACACGTTTGACCTCAAATTCTCACAGTCAAGGTTCTCTATAATGGCGGCTACATCACCTTCGTCTCGTTGCATTTTAGCACTACAATTATCCCCTAGTTTCTTCGATGTATATGCTTGCAACAAACTTGAGTATAAACTTGTTTACATCCAAAACTTTTATCATACTAAGTTCAATCTCCAACGCAATGGTTTTACTGAGTTGGGTTTCGCTTGTTTTGATTCTGACCAAGAGCCTGGTACTTATGAGAGAAATGATCTACCATTTTGTGCTTCGACTGATAGGATGGACGATACTTTCGAATTTGATTGTGCAAATTTTGTCTCCATTGAATCACAAGAGTTCATAAACATTATCACACGGTTTAGTAATTTTGATAATGTTCTTGTTACTCTATCAAGTTCACAAGTCAAGTTCTCTTATGGAAGCACACAGATTTTTCTAACTAAAGAGAGTGATCAAATTATTTTTGCAATAACTCTCCAACCAACGGAATTATTTAGCAATTTTGTAAGTCGATCCAAAAGGGTATGGTTATTCAAATCAAATAATTCACTTAAAGGTGTAATAGCTGCCCCTTTAGGATTGTATGCTCGATATGTGGCCTATTTTCCTTATAGGAGATAA ATGGTTAATAGTAACCAACTCCATGATTTGGTAGAAGCCATCTCTGTCCTCACCGAGACTTTCGATGACACGTTTGACCTCAAATTCTCACAGTCAAGGTTCTCTATAATGGCGGCTACATCACCTTCGTCTCGTTGCATTTTAGCACTACAATTATCCCCTAGTTTCTTCGATGTATATGCTTGCAACAAACTTGAGTATAAACTTGTTTACATCCAAAACTTTTATCATACTAAGTTCAATCTCCAACGCAATGGTTTTACTGAGTTGGGTTTCGCTTGTTTTGATTCTGACCAAGAGCCTGGTACTTATGAGAGAAATGATCTACCATTTTGTGCTTCGACTGATAGGATGGACGATACTTTCGAATTTGATTGTGCAAATTTTGTCTCCATTGAATCACAAGAGTTCATAAACATTATCACACGGTTTAGTAATTTTGATAATGTTCTTGTTACTCTATCAAGTTCACAAGTCAAGTTCTCTTATGGAAGCACACAGATTTTTCTAACTAAAGAGAGTGATCAAATTATTTTTGCAATAACTCTCCAACCAACGGAATTATTTAGCAATTTTGTAAGTCGATCCAAAAGGGTATGGTTATTCAAATCAAATAATTCACTTAAAGGTGTAATAGCTGCCCCTTTAGGATTGTATGCTCGATATGTGGCCTATTTTCCTTATAGGAGATAA MVNSNQLHDLVEAISVLTETFDDTFDLKFSQSRFSIMAATSPSSRCILALQLSPSFFDVYACNKLEYKLVYIQNFYHTKFNLQRNGFTELGFACFDSDQEPGTYERNDLPFCASTDRMDDTFEFDCANFVSIESQEFINIITRFSNFDNVLVTLSSSQVKFSYGSTQIFLTKESDQIIFAITLQPTELFSNFVSRSKRVWLFKSNNSLKGVIAAPLGLYARYVAYFPYRR
BLAST of ClCG06G003980 vs. TrEMBL
Match: A0A0A0LIF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.6e-24 Identity = 83/245 (33.88%), Postives = 123/245 (50.20%), Query Frame = 1
BLAST of ClCG06G003980 vs. TrEMBL
Match: A0A0A0KFM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 7.3e-19 Identity = 72/227 (31.72%), Postives = 104/227 (45.81%), Query Frame = 1
BLAST of ClCG06G003980 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.3e-17 Identity = 75/248 (30.24%), Postives = 119/248 (47.98%), Query Frame = 1
BLAST of ClCG06G003980 vs. TrEMBL
Match: A0A0A0KA18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006750 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 8.9e-17 Identity = 70/222 (31.53%), Postives = 106/222 (47.75%), Query Frame = 1
BLAST of ClCG06G003980 vs. TrEMBL
Match: A0A0A0KCY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002350 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 4.6e-13 Identity = 51/128 (39.84%), Postives = 71/128 (55.47%), Query Frame = 1
BLAST of ClCG06G003980 vs. NCBI nr
Match: gi|659116807|ref|XP_008458269.1| (PREDICTED: uncharacterized protein LOC103497738 [Cucumis melo]) HSP 1 Score: 132.5 bits (332), Expect = 9.4e-28 Identity = 79/178 (44.38%), Postives = 106/178 (59.55%), Query Frame = 1
BLAST of ClCG06G003980 vs. NCBI nr
Match: gi|659119586|ref|XP_008459734.1| (PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo]) HSP 1 Score: 129.0 bits (323), Expect = 1.0e-26 Identity = 85/244 (34.84%), Postives = 131/244 (53.69%), Query Frame = 1
BLAST of ClCG06G003980 vs. NCBI nr
Match: gi|659117587|ref|XP_008458680.1| (PREDICTED: uncharacterized protein LOC103498008 [Cucumis melo]) HSP 1 Score: 125.6 bits (314), Expect = 1.2e-25 Identity = 73/159 (45.91%), Postives = 93/159 (58.49%), Query Frame = 1
BLAST of ClCG06G003980 vs. NCBI nr
Match: gi|778686236|ref|XP_011652354.1| (PREDICTED: uncharacterized protein LOC101206630 isoform X2 [Cucumis sativus]) HSP 1 Score: 121.7 bits (304), Expect = 1.7e-24 Identity = 83/242 (34.30%), Postives = 123/242 (50.83%), Query Frame = 1
BLAST of ClCG06G003980 vs. NCBI nr
Match: gi|778686233|ref|XP_004146827.2| (PREDICTED: uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus]) HSP 1 Score: 120.6 bits (301), Expect = 3.7e-24 Identity = 83/245 (33.88%), Postives = 123/245 (50.20%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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