ClCG05G000560 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTTAAATTGTCATGGCTTCTTTGGCTGTACAGCATGGGAGTCTTTAAGTAAGTTGGCGTCAATTTATATTGAAGTTCGTTGTCTCACGTTGTAACTTAAACTGCACAAGAACAACCCAACCCATTTGGTAATGAACTGTTCTGGGTTGTTGGTTTGGTTGGCAGGTTAAAAGAAGTCTGTTAGTTTTTCTCAAATACTCATAGTTTATTGGGTATGCAGCTTATCATTGTATTCTGCACTTGTTGAATCCTTGCAGTTGATTGAATCCTTCATAGTTAATATCACGTTGTTCACTAATCACTCACTAGGGATACTTGCATCTTGCACCTAGCAAATTTGCAGATTTTTAGAAGTTAGTTCTCCTTGTGGCTTTCTTGGTTGATTTGGCTTGTGCTCTTGCATGGCCTGGTTCTGCAGTCATTTGATTTTATTTTTGTGAAAGCCATCTCTTATTAAAATGTATTTGGTGATGCTTGTTCTTCATAATTGCCCTGGTGCCTAAGTGTTATGATGTCAGTTGTTATTGGGTTTAAATGTCATTTGGGATATGTACTCTGGAACTTATCCAATTTACTCTTCGTACATTCTAATGTCTAAACTTGTAGCCGTAACTTGTTCAAAGAAATTAGTCTCTATTAGCCTTCCATTTATGAATTTTGGAAGAATATTCACATTGTATCTTTTCTTGAATGAAAATAAAGATTTGTTGAAAATGCATGGAGTAATATTAGACATTTAAAAGTACATAGACTATGGAACGTGATACAGAGTAGGAGCAAAATATTATTTTAACTTTTTTCTTTTCACAGCATAGATGCCTGTTTCTATGAACCAAGTGGGATTGTGATGTTTTCCGACTTTATGATCTCCATATACTGACAATATTGATCAAATAACCGTTAATGGAGAAGTATGTCATTAGAAACATACACTTCTTCTTCTCTGGATGACCGAGATGTAGTTGAGAAAATGCAAGATGTGCTTCACAATTACAGAGTCGAGCAAGGCATTAAGAAGTCTCTCTTTCTATTTCTTCAAGCATGGCTTTATGTGAAGGAGCATCAAAATGTTATGTGGTCATTCAGATTGGTTGACTCATTCATCAAGGAGCATGAGAACACCTAA ATGTCTTTAAATTGTCATGGCTTCTTTGGCTGTACAGCATGGGAGTCTTTAAAAACATACACTTCTTCTTCTCTGGATGACCGAGATGTAGTTGAGAAAATGCAAGATGTGCTTCACAATTACAGAGTCGAGCAAGGCATTAAGAAGTCTCTCTTTCTATTTCTTCAAGCATGGCTTTATGTGAAGGAGCATCAAAATGTTATGTGGTCATTCAGATTGGTTGACTCATTCATCAAGGAGCATGAGAACACCTAA ATGTCTTTAAATTGTCATGGCTTCTTTGGCTGTACAGCATGGGAGTCTTTAAAAACATACACTTCTTCTTCTCTGGATGACCGAGATGTAGTTGAGAAAATGCAAGATGTGCTTCACAATTACAGAGTCGAGCAAGGCATTAAGAAGTCTCTCTTTCTATTTCTTCAAGCATGGCTTTATGTGAAGGAGCATCAAAATGTTATGTGGTCATTCAGATTGGTTGACTCATTCATCAAGGAGCATGAGAACACCTAA MSLNCHGFFGCTAWESLKTYTSSSLDDRDVVEKMQDVLHNYRVEQGIKKSLFLFLQAWLYVKEHQNVMWSFRLVDSFIKEHENT
BLAST of ClCG05G000560 vs. TrEMBL
Match: A0A0A0KCG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046350 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-09 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 1
BLAST of ClCG05G000560 vs. TrEMBL
Match: D7M9R6_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_328472 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 7.3e-09 Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = 1
BLAST of ClCG05G000560 vs. TrEMBL
Match: A0A067JSX1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02865 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-08 Identity = 30/53 (56.60%), Postives = 42/53 (79.25%), Query Frame = 1
BLAST of ClCG05G000560 vs. TrEMBL
Match: A0A067K796_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15497 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-08 Identity = 30/53 (56.60%), Postives = 42/53 (79.25%), Query Frame = 1
BLAST of ClCG05G000560 vs. TrEMBL
Match: Q8LAC7_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.1e-08 Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 1
BLAST of ClCG05G000560 vs. TAIR10
Match: AT4G32605.1 (AT4G32605.1 Mitochondrial glycoprotein family protein) HSP 1 Score: 66.2 bits (160), Expect = 1.1e-11 Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 1
BLAST of ClCG05G000560 vs. NCBI nr
Match: gi|449446313|ref|XP_004140916.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis sativus]) HSP 1 Score: 70.5 bits (171), Expect = 1.6e-09 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 1
BLAST of ClCG05G000560 vs. NCBI nr
Match: gi|659113531|ref|XP_008456624.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial [Cucumis melo]) HSP 1 Score: 70.1 bits (170), Expect = 2.1e-09 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 1
BLAST of ClCG05G000560 vs. NCBI nr
Match: gi|297798700|ref|XP_002867234.1| (hypothetical protein ARALYDRAFT_328472 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 67.8 bits (164), Expect = 1.0e-08 Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = 1
BLAST of ClCG05G000560 vs. NCBI nr
Match: gi|802762339|ref|XP_012089956.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Jatropha curcas]) HSP 1 Score: 67.0 bits (162), Expect = 1.8e-08 Identity = 30/53 (56.60%), Postives = 42/53 (79.25%), Query Frame = 1
BLAST of ClCG05G000560 vs. NCBI nr
Match: gi|802658407|ref|XP_012080597.1| (PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Jatropha curcas]) HSP 1 Score: 67.0 bits (162), Expect = 1.8e-08 Identity = 30/53 (56.60%), Postives = 42/53 (79.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |