ClCG02G008530 (gene) Watermelon (Charleston Gray)

NameClCG02G008530
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionTy3-gypsy retrotransposon protein
LocationCG_Chr02 : 11113870 .. 11115416 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATCCAAAGATAATTGTTCTAAAACTTCAAGTGACACTTACAGAAGACTAACTACTCATAGCGGCTCCAAGGAAATGCAACAATTTAATGAGCAACCAACCTTTGAGATCACAAGGAACATATGGGAGTGGCTCTCGAGGGACCCAAAAGTTGGGGTCGGCATCAGAGAAAATCTTGCACTTGAGAAGCACATCTCAACTTCTGAACAATCAAGCAAGGAGGCATCACACCCAAATATAATGTCAGTCATGATGGCCAATGTGGGAACTAGTGAAGAAAGGATGGTTGAGCTCGAAAGGAAAGTTAGCATGTTGTTAAAGGCAGTTGAAGAAAGGGATTATGAAATTGCATCTCTCAAGAATCATATTGAGAGTCGTGTTGAATCAAGCCATACACTCGCAGTCAAGAACAATAGGGAAGAATGTTTTACAAGAAAGTCAACCACAAGATTCAACTTCAATTGCTTCGTTGTTTGTTCAACAATTGCAGGAGATGATTGCAAACTCCATCAAGGCTTAATATGGTAGACCTAGTCAAACTTCCCTCTTGTATTCCAAACCATATACAAAAAGGATTGACAACCTAAGGATGCCAAATGGGTACCAACCACTCAAGTTCCAACAGTTTGATGGGAAGGGCAACCCAAAGCAACATGTTGCTCAGGTCATTGAAACATGTAAAAATGCAGGAACCAGAGGAGATTTGCTAGTCAAACGGTTCGTTCGAACTCTGAAGGAAAATGCCTTCGACTGGTACACCGAACTTGAAACTATTAATAGTTGGAGGTAGCTTGAATGAGAATTCATCAATTGTTTCTACAGTACTAGGCGTATCGTTAGTATGATAGAGCTTGATAAGCACTTTAAAAGGTAACTCTCGTACGTGGGAGTTGCGCTTTATGTAGTTTAATCCCACGTCTCTTGATTGCTCTCTTAATAAAGACCTGCAAAAGAAACAGAGAAAGGAAGGTTTTTTTCTTGATAAAAATTTTCTTTAGTTTCCTCCCTTTATCAAGGATCCACAATCCTTTATTTCATCACATAGAGAATAGGAGAGGCTCATGCTGGTGGTGTTTAGAGTCAACAACGAATGTAATCTTCTATCTCTAAAGCATACTTAACCCTGAATGATGTTCTGTAATTTTTTCCCAATGTATTGGTATTTTAAAATCCCAATTTATTTCGAATTTGGTTCTGTATTGCTTCTGCTGTGTTAGGGATTTCAACCCTTTCACATCAAGCATAGGATCATGAGCCCGCACAACCATTTCATTGGAACGAGTCATGCTCCTTTACAACATTAGGAAAATCGCCCCTATTAACTTAGGAGGGATTATAAGGTAAGGAATGGTGGAGTGTGCCCTAGGATGAGAGGGCGCTTGTTCTTTTCTTCCCTCATATGCAAGTTGTGTGCTCGAGTAGATGTGGTGGTGGATGCAACAGAGGAATGTTGCAAAGTCAAGCCAGCAATTGATTTAGGCTTGATCAAGAGGCTTCAAGGAAGTATGGCCACTAGGAAGGGCAAGACCTTGATAAGCACTTGA

mRNA sequence

ATGACATCCAAAGATAATTGTTCTAAAACTTCAAGTGACACTTACAGAAGACTAACTACTCATAGCGGCTCCAAGGAAATGCAACAATTTAATGAGCAACCAACCTTTGAGATCACAAGGAACATATGGGAGTGGCTCTCGAGGGACCCAAAAGTTGGGGTCGGCATCAGAGAAAATCTTGCACTTGAGAAGCACATCTCAACTTCTGAACAATCAAGCAAGGAGGCATCACACCCAAATATAATGTCAGTCATGATGGCCAATGTGGGAACTAGTGAAGAAAGGATGGTTGAGCTCGAAAGGAAAGTTAGCATGTTGTTAAAGGCAGTTGAAGAAAGGGATTATGAAATTGCATCTCTCAAGAATCATATTGAGAGTCGTGTTGAATCAAGCCATACACTCGCAGTCAAGAACAATAGGGAAGAATGTTTTACAAGAAAGTCAACCACAAGATTCAACTTCAATTGCTTCGTTGTTTGTTCAACAATTGCAGGAGATGATTGCAAACTCCATCAAGGCTTAATATGGATGCCAAATGGGTACCAACCACTCAAGTTCCAACAGTTTGATGGGAAGGGCAACCCAAAGCAACATGTTGCTCAGGTCATTGAAACATGTAAAAATGCAGGAACCAGAGGAGATTTGCTAGTCAAACGGTTCGTTCGAACTCTGAAGGAAAATGCCTTCGACTGGTACACCGAACTTGAAACTATTAATAGTTGGAGGATGAGAGGGCGCTTGTTCTTTTCTTCCCTCATATGCAAGTTGTGTGCTCGAGTAGATGTGGTGGTGGATGCAACAGAGGAATGTTGCAAAGTCAAGCCAGCAATTGATTTAGGCTTGATCAAGAGGCTTCAAGGAAGTATGGCCACTAGGAAGGGCAAGACCTTGATAAGCACTTGA

Coding sequence (CDS)

ATGACATCCAAAGATAATTGTTCTAAAACTTCAAGTGACACTTACAGAAGACTAACTACTCATAGCGGCTCCAAGGAAATGCAACAATTTAATGAGCAACCAACCTTTGAGATCACAAGGAACATATGGGAGTGGCTCTCGAGGGACCCAAAAGTTGGGGTCGGCATCAGAGAAAATCTTGCACTTGAGAAGCACATCTCAACTTCTGAACAATCAAGCAAGGAGGCATCACACCCAAATATAATGTCAGTCATGATGGCCAATGTGGGAACTAGTGAAGAAAGGATGGTTGAGCTCGAAAGGAAAGTTAGCATGTTGTTAAAGGCAGTTGAAGAAAGGGATTATGAAATTGCATCTCTCAAGAATCATATTGAGAGTCGTGTTGAATCAAGCCATACACTCGCAGTCAAGAACAATAGGGAAGAATGTTTTACAAGAAAGTCAACCACAAGATTCAACTTCAATTGCTTCGTTGTTTGTTCAACAATTGCAGGAGATGATTGCAAACTCCATCAAGGCTTAATATGGATGCCAAATGGGTACCAACCACTCAAGTTCCAACAGTTTGATGGGAAGGGCAACCCAAAGCAACATGTTGCTCAGGTCATTGAAACATGTAAAAATGCAGGAACCAGAGGAGATTTGCTAGTCAAACGGTTCGTTCGAACTCTGAAGGAAAATGCCTTCGACTGGTACACCGAACTTGAAACTATTAATAGTTGGAGGATGAGAGGGCGCTTGTTCTTTTCTTCCCTCATATGCAAGTTGTGTGCTCGAGTAGATGTGGTGGTGGATGCAACAGAGGAATGTTGCAAAGTCAAGCCAGCAATTGATTTAGGCTTGATCAAGAGGCTTCAAGGAAGTATGGCCACTAGGAAGGGCAAGACCTTGATAAGCACTTGA

Protein sequence

MTSKDNCSKTSSDTYRRLTTHSGSKEMQQFNEQPTFEITRNIWEWLSRDPKVGVGIRENLALEKHISTSEQSSKEASHPNIMSVMMANVGTSEERMVELERKVSMLLKAVEERDYEIASLKNHIESRVESSHTLAVKNNREECFTRKSTTRFNFNCFVVCSTIAGDDCKLHQGLIWMPNGYQPLKFQQFDGKGNPKQHVAQVIETCKNAGTRGDLLVKRFVRTLKENAFDWYTELETINSWRMRGRLFFSSLICKLCARVDVVVDATEECCKVKPAIDLGLIKRLQGSMATRKGKTLIST
BLAST of ClCG02G008530 vs. TrEMBL
Match: E5GCP6_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.9e-36
Identity = 105/263 (39.92%), Postives = 150/263 (57.03%), Query Frame = 1

Query: 8   SKTSSDTYRRLTTHSGSKE-MQQFNEQPTFEITRNIWEWLSRDPKVGVGIRENLALEKHI 67
           S  +SD+Y  L T S  K  MQ+  ++  F + +   E L   PK G+ IR+N       
Sbjct: 10  SSVASDSYIGLVTQSHLKRSMQEQEQEQGFVLKKKSLEQLIESPKGGIIIRDNPLFNNST 69

Query: 68  STSEQSSKEASHPNIMSVMMANVGTSEERMVELERKVSMLLKAVEERDYEIASLKNHIES 127
             S  S K ASH  ++SVMM +V T+E  + E+ERK++ L+K +EERD+EIA+LK+ +++
Sbjct: 70  PASNLSDK-ASHLEVVSVMMVDV-TAEATVTEMERKINFLMKVIEERDHEIAALKDQMKA 129

Query: 128 --RVESSHTLAVKNN-------REECFTRKSTTRFNFNCFVVCSTIAGDDCKLHQG---- 187
               ESS T  VK         +E    ++S +  + +   +   IA      + G    
Sbjct: 130 CETGESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQYGGPPQT 189

Query: 188 -------------LIWMPNGYQPLKFQQFDGKGNPKQHVAQVIETCKNAGTRGDLLVKRF 242
                         + MP GYQP KFQQFDG+GNPKQH+A  +ETC+NAG+RGD LVK+F
Sbjct: 190 SFMYSKSYTKRIDNLRMPLGYQPPKFQQFDGRGNPKQHIAHFVETCENAGSRGDQLVKQF 249

BLAST of ClCG02G008530 vs. TrEMBL
Match: E5GB67_CUCME (Retrotransposon gag protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.6e-35
Identity = 97/232 (41.81%), Postives = 137/232 (59.05%), Query Frame = 1

Query: 32  EQPTFEITRNIWEWLSRDPKVGVGIRENLALEKHISTSEQSSKEASHPNIMSVMMANVGT 91
           ++  F + +   E L    K G+ IR+N        TS  S KE SH  ++SVMM +V T
Sbjct: 4   QEQGFVLKKKSLEQLIESLKGGIIIRDNPLFNNSTPTSNLSDKE-SHLEVVSVMMIDV-T 63

Query: 92  SEERMVELERKVSMLLKAVEERDYEIASLKNHIES--RVESSHTLAVK--NNREECFTRK 151
           +E  M E+E+K++ L+K VEERD+EIA+LK+ +++    ESS T  VK  +  +  +   
Sbjct: 64  AEATMAEMEKKINFLMKVVEERDHEIAALKDQMKACESAESSQTSVVKTTDKGKNVYGGP 123

Query: 152 STTRFNFNCFVVCSTIAGDDCKLHQGLIWMPNGYQPLKFQQFDGKGNPKQHVAQVIETCK 211
             T F ++      T   D+ +       MP GYQP KFQQFDGKGNPKQH+A  +ETC+
Sbjct: 124 PQTSFMYS---KPYTKRIDNLR-------MPLGYQPPKFQQFDGKGNPKQHIAHFVETCE 183

Query: 212 NAGTRGDLLVKRFVRTLKENAFDWYTEL--ETINSWRMRGRLFFSSLICKLC 258
           NAG+RGD LV++FVR+LK NAF+WYT+L  E  +SW    + F +      C
Sbjct: 184 NAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVTDSWEQLEKEFLNRFYSTKC 223

BLAST of ClCG02G008530 vs. TrEMBL
Match: E5GBB0_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.6e-32
Identity = 76/134 (56.72%), Postives = 100/134 (74.63%), Query Frame = 1

Query: 1   MTSKDNCSKTSSDTYRRLTTHSGSKEMQQFNEQPTFEITRNIWEWLSRDPKVGVGIRENL 60
           MTS+ N SK  SD  +R  T S S+E+Q   +   FE+ +NIWE +S+ PK G+ I+EN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSCSREIQSSEDMLPFEVAKNIWEQISKPPKGGIIIKENP 60

Query: 61  ALEKHISTSEQSSKEASHPNIMSVMMANVGTSEERMVELERKVSMLLKAVEERDYEIASL 120
           A++KH S SE S++EA  PNIMSVM+ +V TSE RMVELE+KV+ML+KAVEERD++IASL
Sbjct: 61  AIDKHNSLSEHSNEEAPQPNIMSVMVTDVDTSEARMVELEKKVNMLMKAVEERDFKIASL 120

Query: 121 KNHIESRVESSHTL 135
           KNHIESR  +  T+
Sbjct: 121 KNHIESRDTAESTV 134

BLAST of ClCG02G008530 vs. TrEMBL
Match: A5C4T7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020798 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.0e-24
Identity = 72/175 (41.14%), Postives = 98/175 (56.00%), Query Frame = 1

Query: 82  MSVMMANVGTSEERMVELERKVSMLLKAVEERDYEIASLKNHIESRVESSHTLAVK---- 141
           MSVM     + EE++ E+ R ++ L K VEE+D +IASL N +E++   ++T+  +    
Sbjct: 98  MSVMTTGTTSIEEQLAEIARAIAKLTKTVEEKDMQIASLINKVETQDMITNTIKAQYGGP 157

Query: 142 NNREECFTRKSTTRFNFNCFVVCSTIAGDDCKLHQGLIWMPNGYQPLKFQQFDGKGNPKQ 201
           +     +++  T R +                LH     MP GYQP KFQ FDGK NPKQ
Sbjct: 158 SQSTLMYSKPYTKRID---------------NLH-----MPMGYQPPKFQSFDGKDNPKQ 217

Query: 202 HVAQVIETCKNAGTRGDLLVKRFVRTLKENAFDWYTEL--ETINSWRMRGRLFFS 251
           HVA  +ETC NAGT  DLLV +FV +L+ NAFDWY +L  E I SW    R F +
Sbjct: 218 HVAHFVETCNNAGTDSDLLVNQFVCSLRGNAFDWYIDLAPECIESWDQMEREFLN 252

BLAST of ClCG02G008530 vs. TrEMBL
Match: M5Y2U9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppb024107mg PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.0e-20
Identity = 73/204 (35.78%), Postives = 100/204 (49.02%), Query Frame = 1

Query: 77  SHPNIMSVMMANVGTSEERMVELERKVSMLLKAVEERDYEIASLKNHI------------ 136
           S+   M VM+    + EE++  +   V+ L K VEE+D +IASL N+             
Sbjct: 180 SYSMAMQVMVTGAMSIEEQLAHMSEAVTKLTKMVEEKDAQIASLINNKWEAHQDKEPGPD 239

Query: 137 ------ESRVESSH------TLAVKNNREECFTRK----STTRFNFNCFVVCSTIAGDDC 196
                    VESS       T + + + E+         +T R  +      + +     
Sbjct: 240 AHKKGPHHEVESSEKGLGHETESGEKSHEKVDAASDMIANTIRVQYGAPSRDTLMYSKPY 299

Query: 197 KLHQGLIWMPNGYQPLKFQQFDGKGNPKQHVAQVIETCKNAGTRGDLLVKRFVRTLKENA 251
                 + MP GYQP KFQQF+ KGNPKQHVA  +ETC NAG  GD LVK+FVR+ K N 
Sbjct: 300 TRRIDNLRMPTGYQPPKFQQFNAKGNPKQHVAHFVETCNNAGIEGDHLVKQFVRSWKGNL 359

BLAST of ClCG02G008530 vs. NCBI nr
Match: gi|307136441|gb|ADN34247.1| (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 160.6 bits (405), Expect = 4.2e-36
Identity = 105/263 (39.92%), Postives = 150/263 (57.03%), Query Frame = 1

Query: 8   SKTSSDTYRRLTTHSGSKE-MQQFNEQPTFEITRNIWEWLSRDPKVGVGIRENLALEKHI 67
           S  +SD+Y  L T S  K  MQ+  ++  F + +   E L   PK G+ IR+N       
Sbjct: 10  SSVASDSYIGLVTQSHLKRSMQEQEQEQGFVLKKKSLEQLIESPKGGIIIRDNPLFNNST 69

Query: 68  STSEQSSKEASHPNIMSVMMANVGTSEERMVELERKVSMLLKAVEERDYEIASLKNHIES 127
             S  S K ASH  ++SVMM +V T+E  + E+ERK++ L+K +EERD+EIA+LK+ +++
Sbjct: 70  PASNLSDK-ASHLEVVSVMMVDV-TAEATVTEMERKINFLMKVIEERDHEIAALKDQMKA 129

Query: 128 --RVESSHTLAVKNN-------REECFTRKSTTRFNFNCFVVCSTIAGDDCKLHQG---- 187
               ESS T  VK         +E    ++S +  + +   +   IA      + G    
Sbjct: 130 CETGESSQTPVVKATDKGKNVVQENQPQQQSVSVASLSVQQLQDMIANSIRAQYGGPPQT 189

Query: 188 -------------LIWMPNGYQPLKFQQFDGKGNPKQHVAQVIETCKNAGTRGDLLVKRF 242
                         + MP GYQP KFQQFDG+GNPKQH+A  +ETC+NAG+RGD LVK+F
Sbjct: 190 SFMYSKSYTKRIDNLRMPLGYQPPKFQQFDGRGNPKQHIAHFVETCENAGSRGDQLVKQF 249

BLAST of ClCG02G008530 vs. NCBI nr
Match: gi|307135838|gb|ADN33709.1| (retrotransposon gag protein [Cucumis melo subsp. melo])

HSP 1 Score: 156.4 bits (394), Expect = 8.0e-35
Identity = 97/232 (41.81%), Postives = 137/232 (59.05%), Query Frame = 1

Query: 32  EQPTFEITRNIWEWLSRDPKVGVGIRENLALEKHISTSEQSSKEASHPNIMSVMMANVGT 91
           ++  F + +   E L    K G+ IR+N        TS  S KE SH  ++SVMM +V T
Sbjct: 4   QEQGFVLKKKSLEQLIESLKGGIIIRDNPLFNNSTPTSNLSDKE-SHLEVVSVMMIDV-T 63

Query: 92  SEERMVELERKVSMLLKAVEERDYEIASLKNHIES--RVESSHTLAVK--NNREECFTRK 151
           +E  M E+E+K++ L+K VEERD+EIA+LK+ +++    ESS T  VK  +  +  +   
Sbjct: 64  AEATMAEMEKKINFLMKVVEERDHEIAALKDQMKACESAESSQTSVVKTTDKGKNVYGGP 123

Query: 152 STTRFNFNCFVVCSTIAGDDCKLHQGLIWMPNGYQPLKFQQFDGKGNPKQHVAQVIETCK 211
             T F ++      T   D+ +       MP GYQP KFQQFDGKGNPKQH+A  +ETC+
Sbjct: 124 PQTSFMYS---KPYTKRIDNLR-------MPLGYQPPKFQQFDGKGNPKQHIAHFVETCE 183

Query: 212 NAGTRGDLLVKRFVRTLKENAFDWYTEL--ETINSWRMRGRLFFSSLICKLC 258
           NAG+RGD LV++FVR+LK NAF+WYT+L  E  +SW    + F +      C
Sbjct: 184 NAGSRGDQLVRQFVRSLKGNAFEWYTDLEPEVTDSWEQLEKEFLNRFYSTKC 223

BLAST of ClCG02G008530 vs. NCBI nr
Match: gi|307135887|gb|ADN33752.1| (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 147.5 bits (371), Expect = 3.7e-32
Identity = 76/134 (56.72%), Postives = 100/134 (74.63%), Query Frame = 1

Query: 1   MTSKDNCSKTSSDTYRRLTTHSGSKEMQQFNEQPTFEITRNIWEWLSRDPKVGVGIRENL 60
           MTS+ N SK  SD  +R  T S S+E+Q   +   FE+ +NIWE +S+ PK G+ I+EN 
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSCSREIQSSEDMLPFEVAKNIWEQISKPPKGGIIIKENP 60

Query: 61  ALEKHISTSEQSSKEASHPNIMSVMMANVGTSEERMVELERKVSMLLKAVEERDYEIASL 120
           A++KH S SE S++EA  PNIMSVM+ +V TSE RMVELE+KV+ML+KAVEERD++IASL
Sbjct: 61  AIDKHNSLSEHSNEEAPQPNIMSVMVTDVDTSEARMVELEKKVNMLMKAVEERDFKIASL 120

Query: 121 KNHIESRVESSHTL 135
           KNHIESR  +  T+
Sbjct: 121 KNHIESRDTAESTV 134

BLAST of ClCG02G008530 vs. NCBI nr
Match: gi|659074577|ref|XP_008437679.1| (PREDICTED: uncharacterized protein LOC103483019 [Cucumis melo])

HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30
Identity = 86/171 (50.29%), Postives = 104/171 (60.82%), Query Frame = 1

Query: 107 LKAVEERDYEIASLKNHIESR--VESSHTLAVKNNR------EECFTRKSTTRFNFNCFV 166
           +KAVEERD+EIA LKNHIESR   ESSHT  +KN        +E   + ST+  + +   
Sbjct: 1   MKAVEERDFEIALLKNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQ 60

Query: 167 VCSTIAGDDCKLHQGLIW-----------------MPNGYQPLKFQQFDGKGNPKQHVAQ 226
           +   IA      + G +                  MP+ YQP KFQQFDGKGNPKQHVA 
Sbjct: 61  LQEMIANSIKTQYGGPVQTFSLYSKPYTKRIDNMRMPHEYQPPKFQQFDGKGNPKQHVAH 120

Query: 227 VIETCKNAGTRGDLLVKRFVRTLKENAFDWYTEL--ETINSWRMRGRLFFS 251
            IETC+ AGTRGDLLVK+FVRTLK NAFDWYT+L  E+I+SW    R F +
Sbjct: 121 FIETCETAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDSWEQLERDFLN 171

BLAST of ClCG02G008530 vs. NCBI nr
Match: gi|659118742|ref|XP_008459280.1| (PREDICTED: uncharacterized protein LOC103498458 [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 4.5e-30
Identity = 83/199 (41.71%), Postives = 120/199 (60.30%), Query Frame = 1

Query: 40  RNIWEWLSRDPKVGVGIRENLALEKHISTSEQSSKEASHPNIMSVMMANVGTSEERMVEL 99
           ++I + L   PK G+ I+EN   +   S   +  KEA HP++MSVMM ++ T+E  M E+
Sbjct: 2   QSILKQLMLSPKAGIFIKENPLYDNFDSALSKLKKEA-HPDVMSVMMVDI-TAEAAMTEM 61

Query: 100 ERKVSMLLKAVEERDYEIASLKNH--IESRVESSHTLAVKNNREECFTRKSTTRFNFNCF 159
           ERK+++++K V+E+D++I +L+    I    +SS T  +++         S+ R  +   
Sbjct: 62  ERKINLVMKVVKEQDHKITALREQMQIHETTKSSQTPQLQD------MITSSIRAQYGGP 121

Query: 160 VVCSTIAGDDCKLHQGLIWMPNGYQPLKFQQFDGKGNPKQHVAQVIETCKNAGTRGDLLV 219
              S +           + MP GYQPLKFQQFD KGN  QHVA  +ETCKN G+RGD LV
Sbjct: 122 PQTSFMYSKPYTKRINDLRMPVGYQPLKFQQFDRKGNLNQHVAHFVETCKNTGSRGDQLV 181

Query: 220 KRFVRTLKENAFDWYTELE 237
           K+FVR+LK NAF WY +LE
Sbjct: 182 KQFVRSLKGNAFKWYIDLE 192

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
E5GCP6_CUCME2.9e-3639.92Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GB67_CUCME5.6e-3541.81Retrotransposon gag protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GBB0_CUCME2.6e-3256.72Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A5C4T7_VITVI2.0e-2441.14Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020798 PE=4 SV=1[more]
M5Y2U9_PRUPE3.0e-2035.78Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppb024107mg PE=4 S... [more]
Match NameE-valueIdentityDescription
gi|307136441|gb|ADN34247.1|4.2e-3639.92ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo][more]
gi|307135838|gb|ADN33709.1|8.0e-3541.81retrotransposon gag protein [Cucumis melo subsp. melo][more]
gi|307135887|gb|ADN33752.1|3.7e-3256.72ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo][more]
gi|659074577|ref|XP_008437679.1|2.0e-3050.29PREDICTED: uncharacterized protein LOC103483019 [Cucumis melo][more]
gi|659118742|ref|XP_008459280.1|4.5e-3041.71PREDICTED: uncharacterized protein LOC103498458 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G008530.1ClCG02G008530.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG02G008530Cla010489Watermelon (97103) v1wcgwmB207
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG02G008530Wax gourdwcgwgoB271
ClCG02G008530Wax gourdwcgwgoB299
ClCG02G008530Watermelon (Charleston Gray)wcgwcgB090
ClCG02G008530Watermelon (Charleston Gray)wcgwcgB116
ClCG02G008530Cucumber (Gy14) v1cgywcgB024
ClCG02G008530Cucumber (Gy14) v1cgywcgB071
ClCG02G008530Cucumber (Gy14) v1cgywcgB249
ClCG02G008530Cucurbita maxima (Rimu)cmawcgB106
ClCG02G008530Cucurbita maxima (Rimu)cmawcgB462
ClCG02G008530Cucurbita maxima (Rimu)cmawcgB492
ClCG02G008530Cucurbita maxima (Rimu)cmawcgB528
ClCG02G008530Cucurbita moschata (Rifu)cmowcgB096
ClCG02G008530Cucurbita moschata (Rifu)cmowcgB460
ClCG02G008530Cucurbita moschata (Rifu)cmowcgB482
ClCG02G008530Cucurbita moschata (Rifu)cmowcgB526
ClCG02G008530Wild cucumber (PI 183967)cpiwcgB129
ClCG02G008530Wild cucumber (PI 183967)cpiwcgB481
ClCG02G008530Wild cucumber (PI 183967)cpiwcgB578
ClCG02G008530Cucumber (Chinese Long) v2cuwcgB123
ClCG02G008530Melon (DHL92) v3.5.1mewcgB199
ClCG02G008530Cucumber (Chinese Long) v2cuwcgB549
ClCG02G008530Melon (DHL92) v3.5.1mewcgB090
ClCG02G008530Watermelon (97103) v1wcgwmB212
ClCG02G008530Cucurbita pepo (Zucchini)cpewcgB234
ClCG02G008530Cucurbita pepo (Zucchini)cpewcgB269
ClCG02G008530Cucurbita pepo (Zucchini)cpewcgB660
ClCG02G008530Cucurbita pepo (Zucchini)cpewcgB598
ClCG02G008530Bottle gourd (USVL1VR-Ls)lsiwcgB055
ClCG02G008530Bottle gourd (USVL1VR-Ls)lsiwcgB100
ClCG02G008530Cucumber (Gy14) v2cgybwcgB120
ClCG02G008530Cucumber (Gy14) v2cgybwcgB509
ClCG02G008530Melon (DHL92) v3.6.1medwcgB088
ClCG02G008530Melon (DHL92) v3.6.1medwcgB194
ClCG02G008530Melon (DHL92) v3.6.1medwcgB515
ClCG02G008530Silver-seed gourdcarwcgB0031
ClCG02G008530Silver-seed gourdcarwcgB0328
ClCG02G008530Silver-seed gourdcarwcgB0852
ClCG02G008530Cucumber (Chinese Long) v3cucwcgB138
ClCG02G008530Cucumber (Chinese Long) v3cucwcgB479
ClCG02G008530Cucumber (Chinese Long) v3cucwcgB575
ClCG02G008530Watermelon (97103) v2wcgwmbB138
ClCG02G008530Watermelon (97103) v2wcgwmbB142