ClCG02G003080 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCGTTGAGAAAGAAGCGCAGTGAAAGCAGAGAAGCTTGAAAGGCCGATAGAGCAAACGAAGCTAAAAGAAAACCAAAAGGTCCTCGGAATTCGATCTTCTCCGCCGGCGATCCGCCATTTTCAGAGCTGTGAAGCTCTGAGAGAAGAGAATGAAATTAGCTCCAATAGTAATATTTCTCGTCAAAGATTCTGAGGGTTTCGCCTCAGCCATTTCCGGAGCTCTTCGCCCCAACCCTCCTTTCACGGTTACCACGCTGTTAGCTCAATTTCCCTCTGTGTTATTTTTCCTTCATTGAATTCAAGTAATTAGCTGACTAACAGATCAAGTTTGGCTTGATTTTGTTAAAGGGATGGATGCTTCGAGTTCTCCCTGGAGGATTATGCAATCAAGGACCAGAAGGCCTCCGGAAGCATCGTTCACTATCTTGATGATAAGGGAATCTTTCAGGTACTTATTTCGGTTTCCGATTATGTTAGTGTTGAAAAATGGTTGGAAGTTTTATGGAGAATGTCAGTGTTAAACATGTTATGAACAAATTATCCAACGTCAAATTTCTTGTTAGATCATTTCAGCTGGTTTAGCAGTGAAATTCGTACTTGTGTATTGTGGAGTGAAAAGCTTCATTAGAACTCAGAGAATGATTGTTAAGAAATATTAGGATTTTATAGTTTTGGTAATCAACAGTATAGGACAAGGACTATTCTTTATATATATTGGCCTCAACATCATAGCTTCTGGCTGACATATTCCTTTGCTTTATAACACAACACACAAATATTAAGGAGCTAGGTTCAACTATGGATGGAGTGTGAGTTAAAGCTCAGGTGCCTTATCAATGGTGAGAAGAGGAAATGTGCGATGTCTTGTGTTCTGTTTGGGTGCTATTTCGGGTTGGATGTAGTCATTAGCTTGTCTAGGCTCATTGGAACCACATAAAGCGTGTGTTGGACCCTGTCTCCAAAAAAAAGAGCTTTCTAGTTTCTACATCTTGAGAAGTGAAATTTACTTTATAACGTACCGACACATGGATTGGATCACCACCCTTAGGGGAGCTTTTTGCATTATCCCTCAGGGAAAATCGCTCTATTCCCGATCTTTGAATCCTTGAAAGCACATATTGGGATTTGGGTTTGAGAAGAAATCTAAAGGACGAGGAGACTGAGGAGGGGTCTTGTCTATCTACCATTCTTCCCCACCTTACAATGACAAATCTTGGAGACCCATGGAGGTGGATCATTGTCGAGAAAGGCTCACCCACAGCAGTCCCTTAGCCAGAAGATTACATCTTGCGATGTATAGCCAGTCGGCATCACAAAACCTTTTACTTGTGTTTATAGAAGGGTTCTTTCCCAAAGAAAGTAAAAATTTTCATATGGGAGCTTAGCCATGGAAGCATTAGTACTGCTGATGTGCTACAAAGGAAGGCTCTTTGGCTTGTTGCTTCGCCAAATTGATTTTCCCTTTGTCAAAGGGATGGAGAGACCTTGCTGCATTATTCTTTTTGGAAGATTATCCTAATGGCNAGATGTTAAAATTGTCTCC CTTCGTTGAGAAAGAAGCGCAGTGAAAGCAGAGAAGCTTGAAAGGCCGATAGAGCAAACGAAGCTAAAAGAAAACCAAAAGGTCCTCGGAATTCGATCTTCTCCGCCGGCGATCCGCCATTTTCAGAGCTGTGAAGCTCTGAGAGAAGAGAATGAAATTAGCTCCAATAGTAATATTTCTCGTCAAAGATTCTGAGGGTTTCGCCTCAGCCATTTCCGGAGCTCTTCGCCCCAACCCTCCTTTCACGGTTACCACGCTGGATGGATGCTTCGAGTTCTCCCTGGAGGATTATGCAATCAAGGACCAGAAGGCCTCCGGAAGCATCGTTCACTATCTTGATGATAAGGGAATCTTTCAGGTACTTATTTCGGTTTCCGATTATGTTAGTGTTGAAAAATGGTTGGAAGTTTTATGGAGAATGTCAGTGTTAAACATGTTATGAACAAATTATCCAACGTCAAATTTCTTGTTAGATCATTTCAGCTGGTTTAGCAGTGAAATTCGTACTTGTGTATTGTGGAGTGAAAAGCTTCATTAGAACTCAGAGAATGATTGTTAAGAAATATTAGGATTTTATAGTTTTGGTAATCAACAGTATAGGACAAGGACTATTCTTTATATATATTGGCCTCAACATCATAGCTTCTGGCTGACATATTCCTTTGCTTTATAACACAACACACAAATATTAAGGAGCTAGGTTCAACTATGGATGGAGTGTGAGTTAAAGCTCAGGTGCCTTATCAATGGTGAGAAGAGGAAATGTGCGATGTCTTGTGTTCTGTTTGGGTGCTATTTCGGGTTGGATGTAGTCATTAGCTTGTCTAGGCTCATTGGAACCACATAAAGCGTGTGTTGGACCCTGTCTCCAAAAAAAAGAGCTTTCTAGTTTCTACATCTTGAGAAGTGAAATTTACTTTATAACGTACCGACACATGGATTGGATCACCACCCTTAGGGGAGCTTTTTGCATTATCCCTCAGGGAAAATCGCTCTATTCCCGATCTTTGAATCCTTGAAAGCACATATTGGGATTTGGGTTTGAGAAGAAATCTAAAGGACGAGGAGACTGAGGAGGGGTCTTGTCTATCTACCATTCTTCCCCACCTTACAATGACAAATCTTGGAGACCCATGGAGGTGGATCATTGTCGAGAAAGGCTCACCCACAGCAGTCCCTTAGCCAGAAGATTACATCTTGCGATGTATAGCCAGTCGGCATCACAAAACCTTTTACTTGTGTTTATAGAAGGGTTCTTTCCCAAAGAAAGTAAAAATTTTCATATGGGAGCTTAGCCATGGAAGCATTAGTACTGCTGATGTGCTACAAAGGAAGGCTCTTTGGCTTGTTGCTTCGCCAAATTGATTTTCCCTTTGTCAAAGGGATGGAGAGACCTTGCTGCATTATTCTTTTTGGAAGATTATCCTAATGGCNAGATGTTAAAATTGTCTCC ATGAAATTAGCTCCAATAGTAATATTTCTCGTCAAAGATTCTGAGGGTTTCGCCTCAGCCATTTCCGGAGCTCTTCGCCCCAACCCTCCTTTCACGGTTACCACGCTGGATGGATGCTTCGAGTTCTCCCTGGAGGATTATGCAATCAAGGACCAGAAGGCCTCCGGAAGCATCGTTCACTATCTTGATGATAAGGGAATCTTTCAGGTACTTATTTCGGTTTCCGATTATGTTAGTGTTGAAAAATGGTTGGAAGTTTTATGGAGAATGTCAGTGTTAAACATGTTATGA MKLAPIVIFLVKDSEGFASAISGALRPNPPFTVTTLDGCFEFSLEDYAIKDQKASGSIVHYLDDKGIFQVLISVSDYVSVEKWLEVLWRMSVLNML
BLAST of ClCG02G003080 vs. TrEMBL
Match: A0A0A0K119_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G031020 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.7e-25 Identity = 60/74 (81.08%), Postives = 68/74 (91.89%), Query Frame = 1
BLAST of ClCG02G003080 vs. TrEMBL
Match: I3SJU1_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 8.6e-14 Identity = 41/78 (52.56%), Postives = 57/78 (73.08%), Query Frame = 1
BLAST of ClCG02G003080 vs. TrEMBL
Match: C6TKE9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G086000 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 2.5e-13 Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 1
BLAST of ClCG02G003080 vs. TrEMBL
Match: A0A0B2S9P4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_031066 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 2.5e-13 Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 1
BLAST of ClCG02G003080 vs. TrEMBL
Match: I1MHU8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G195100 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 7.3e-13 Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 1
BLAST of ClCG02G003080 vs. TAIR10
Match: AT3G07640.1 (AT3G07640.1 unknown protein) HSP 1 Score: 59.7 bits (143), Expect = 1.1e-09 Identity = 27/72 (37.50%), Postives = 44/72 (61.11%), Query Frame = 1
BLAST of ClCG02G003080 vs. NCBI nr
Match: gi|449453632|ref|XP_004144560.1| (PREDICTED: uncharacterized protein LOC101217042 [Cucumis sativus]) HSP 1 Score: 123.2 bits (308), Expect = 2.4e-25 Identity = 60/74 (81.08%), Postives = 68/74 (91.89%), Query Frame = 1
BLAST of ClCG02G003080 vs. NCBI nr
Match: gi|659124176|ref|XP_008462021.1| (PREDICTED: uncharacterized protein LOC103500492 [Cucumis melo]) HSP 1 Score: 121.3 bits (303), Expect = 9.1e-25 Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 1
BLAST of ClCG02G003080 vs. NCBI nr
Match: gi|502086674|ref|XP_004488290.1| (PREDICTED: uncharacterized protein LOC101511378 [Cicer arietinum]) HSP 1 Score: 89.0 bits (219), Expect = 5.0e-15 Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 1
BLAST of ClCG02G003080 vs. NCBI nr
Match: gi|388504934|gb|AFK40533.1| (unknown [Lotus japonicus]) HSP 1 Score: 84.3 bits (207), Expect = 1.2e-13 Identity = 41/78 (52.56%), Postives = 57/78 (73.08%), Query Frame = 1
BLAST of ClCG02G003080 vs. NCBI nr
Match: gi|359806100|ref|NP_001241187.1| (uncharacterized protein LOC100781998 [Glycine max]) HSP 1 Score: 82.8 bits (203), Expect = 3.6e-13 Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |