Csa7G342760 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGGGCATGTTTGGTCCGTGGGATGGAGTGTGCTATTATATCTCACTTTCAAGTCTGGCCCACCAATTAACATAAATGGGGATAAAGTTTATTATAACCCCCGAGTGTTCACTACTCGCTCTCACTCCTTCCCTCTCCCTTACTTCTCTAAATCCCTCCCTCACTCATCTAGTTCTATGCTTGCATTGCTTCCTCGTCTTCTACTGTGTATCAACCTTCAAGAAGAACCTTATCATTCGACCTTTACTTATTTATCTTGTTCCTCTTCCAACATGGCTAGCACTGACGCAGATGCTCTTGCCTCATCTTTTTCGGTAGAGAAACAATTTGAGCATTTCAGAGCTCAACTTCAAGATTCTGGGAGCTTATGTGACTGCATTCGAAGTGTGGCTATGGAGATCGAGTCATCCACGAGGTTGATGCACGCTAGCTTGCTTTTGATTCATCATTCTCGTCTCACTCGTGGAATTGAATTTTTATTTGCATGA ATGCAAGGGCATGTTTGGTCCGTGGGATGGAGTGTGCTATTATATCTCACTTTCAAGTCTGGCCCACCAATTAACATAAATGGGGATAAAGTTTATTATAACCCCCGAGTGTTCACTACTCGCTCTCACTCCTTCCCTCTCCCTTACTTCTCTAAATCCCTCCCTCACTCATCTAGTTCTATGCTTGCATTGCTTCCTCGTCTTCTACTGTGTATCAACCTTCAAGAAGAACCTTATCATTCGACCTTTACTTATTTATCTTGTTCCTCTTCCAACATGGCTAGCACTGACGCAGATGCTCTTGCCTCATCTTTTTCGGTAGAGAAACAATTTGAGCATTTCAGAGCTCAACTTCAAGATTCTGGGAGCTTATGTGACTGCATTCGAAGTGTGGCTATGGAGATCGAGTCATCCACGAGGTTGATGCACGCTAGCTTGCTTTTGATTCATCATTCTCGTCTCACTCGTGGAATTGAATTTTTATTTGCATGA ATGCAAGGGCATGTTTGGTCCGTGGGATGGAGTGTGCTATTATATCTCACTTTCAAGTCTGGCCCACCAATTAACATAAATGGGGATAAAGTTTATTATAACCCCCGAGTGTTCACTACTCGCTCTCACTCCTTCCCTCTCCCTTACTTCTCTAAATCCCTCCCTCACTCATCTAGTTCTATGCTTGCATTGCTTCCTCGTCTTCTACTGTGTATCAACCTTCAAGAAGAACCTTATCATTCGACCTTTACTTATTTATCTTGTTCCTCTTCCAACATGGCTAGCACTGACGCAGATGCTCTTGCCTCATCTTTTTCGGTAGAGAAACAATTTGAGCATTTCAGAGCTCAACTTCAAGATTCTGGGAGCTTATGTGACTGCATTCGAAGTGTGGCTATGGAGATCGAGTCATCCACGAGGTTGATGCACGCTAGCTTGCTTTTGATTCATCATTCTCGTCTCACTCGTGGAATTGAATTTTTATTTGCATGA MQGHVWSVGWSVLLYLTFKSGPPININGDKVYYNPRVFTTRSHSFPLPYFSKSLPHSSSSMLALLPRLLLCINLQEEPYHSTFTYLSCSSSNMASTDADALASSFSVEKQFEHFRAQLQDSGSLCDCIRSVAMEIESSTRLMHASLLLIHHSRLTRGIEFLFA*
BLAST of Csa7G342760 vs. TrEMBL
Match: A0A0A0K567_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342760 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 5.3e-88 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Csa7G342760 vs. TrEMBL
Match: A0A0A0LE08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G740110 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 6.3e-25 Identity = 72/112 (64.29%), Postives = 81/112 (72.32%), Query Frame = 1
BLAST of Csa7G342760 vs. TrEMBL
Match: A0A061ESQ4_THECC (Translin family protein isoform 2 OS=Theobroma cacao GN=TCM_022191 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.9e-13 Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 1
BLAST of Csa7G342760 vs. TrEMBL
Match: A0A061ES44_THECC (Translin family protein isoform 1 OS=Theobroma cacao GN=TCM_022191 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.9e-13 Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 1
BLAST of Csa7G342760 vs. TrEMBL
Match: F6HR38_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g01630 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 3.1e-11 Identity = 44/99 (44.44%), Postives = 63/99 (63.64%), Query Frame = 1
BLAST of Csa7G342760 vs. TAIR10
Match: AT2G37020.2 (AT2G37020.2 Translin family protein) HSP 1 Score: 65.1 bits (157), Expect = 4.7e-11 Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 1
BLAST of Csa7G342760 vs. NCBI nr
Match: gi|700189375|gb|KGN44608.1| (hypothetical protein Csa_7G342760 [Cucumis sativus]) HSP 1 Score: 331.6 bits (849), Expect = 7.6e-88 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Csa7G342760 vs. NCBI nr
Match: gi|449440117|ref|XP_004137831.1| (PREDICTED: translin [Cucumis sativus]) HSP 1 Score: 122.1 bits (305), Expect = 9.1e-25 Identity = 72/112 (64.29%), Postives = 81/112 (72.32%), Query Frame = 1
BLAST of Csa7G342760 vs. NCBI nr
Match: gi|659084066|ref|XP_008442689.1| (PREDICTED: translin [Cucumis melo]) HSP 1 Score: 107.1 bits (266), Expect = 3.0e-20 Identity = 61/79 (77.22%), Postives = 64/79 (81.01%), Query Frame = 1
BLAST of Csa7G342760 vs. NCBI nr
Match: gi|590630758|ref|XP_007027368.1| (Translin family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 84.0 bits (206), Expect = 2.7e-13 Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 1
BLAST of Csa7G342760 vs. NCBI nr
Match: gi|590630761|ref|XP_007027369.1| (Translin family protein isoform 2 [Theobroma cacao]) HSP 1 Score: 84.0 bits (206), Expect = 2.7e-13 Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |