Csa7G312410.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACATTTTTGCATTCCTTAAATCAATTTACGTTGCAAGTAATAAGTTCATTTTAGCTGGGGAAAAGGAGACTGTTTCTTCAGCCATTCAAAAGGCAAAAAGATTCAGATCAACTGAGCTCCTTAGACGAGGTGTGCTCTTAGTTCCTGTCATATGGGGTGAAGGTAGGGAACCCCAAATAGAAAAGAAAGGGTTTGGTGCTTCAACCACCATTGCTACTACTATGCCATCGGGTAAGTAA ATGTACATTTTTGCATTCCTTAAATCAATTTACGTTGCAAGTAATAAGTTCATTTTAGCTGGGGAAAAGGAGACTGTTTCTTCAGCCATTCAAAAGGCAAAAAGATTCAGATCAACTGAGCTCCTTAGACGAGGTGTGCTCTTAGTTCCTGTCATATGGGGTGAAGGTAGGGAACCCCAAATAGAAAAGAAAGGGTTTGGTGCTTCAACCACCATTGCTACTACTATGCCATCGGGTAAGTAA ATGTACATTTTTGCATTCCTTAAATCAATTTACGTTGCAAGTAATAAGTTCATTTTAGCTGGGGAAAAGGAGACTGTTTCTTCAGCCATTCAAAAGGCAAAAAGATTCAGATCAACTGAGCTCCTTAGACGAGGTGTGCTCTTAGTTCCTGTCATATGGGGTGAAGGTAGGGAACCCCAAATAGAAAAGAAAGGGTTTGGTGCTTCAACCACCATTGCTACTACTATGCCATCGGGTAAGTAA MYIFAFLKSIYVASNKFILAGEKETVSSAIQKAKRFRSTELLRRGVLLVPVIWGEGREPQIEKKGFGASTTIATTMPSGK*
BLAST of Csa7G312410.1 vs. Swiss-Prot
Match: LPA1_ARATH (Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana GN=LPA1 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.0e-17 Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 1
BLAST of Csa7G312410.1 vs. TrEMBL
Match: A0A0A0K9K1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G312410 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 6.7e-36 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1
BLAST of Csa7G312410.1 vs. TrEMBL
Match: A0A0A0KT96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001650 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 6.3e-18 Identity = 53/62 (85.48%), Postives = 56/62 (90.32%), Query Frame = 1
BLAST of Csa7G312410.1 vs. TrEMBL
Match: A0A0D2SCD3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G129100 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 4.1e-17 Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 1
BLAST of Csa7G312410.1 vs. TrEMBL
Match: A0A0D2TE16_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G129100 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 4.1e-17 Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 1
BLAST of Csa7G312410.1 vs. TrEMBL
Match: A0A0D2SCC8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G129100 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 4.1e-17 Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 1
BLAST of Csa7G312410.1 vs. TAIR10
Match: AT1G02910.1 (AT1G02910.1 tetratricopeptide repeat (TPR)-containing protein) HSP 1 Score: 89.4 bits (220), Expect = 1.1e-18 Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 1
BLAST of Csa7G312410.1 vs. NCBI nr
Match: gi|700189253|gb|KGN44486.1| (hypothetical protein Csa_7G312410 [Cucumis sativus]) HSP 1 Score: 157.5 bits (397), Expect = 9.7e-36 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1
BLAST of Csa7G312410.1 vs. NCBI nr
Match: gi|659108737|ref|XP_008454363.1| (PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 100.5 bits (249), Expect = 1.4e-18 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 1
BLAST of Csa7G312410.1 vs. NCBI nr
Match: gi|659108739|ref|XP_008454364.1| (PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 100.5 bits (249), Expect = 1.4e-18 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 1
BLAST of Csa7G312410.1 vs. NCBI nr
Match: gi|778689261|ref|XP_011652924.1| (PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 97.8 bits (242), Expect = 9.1e-18 Identity = 53/62 (85.48%), Postives = 56/62 (90.32%), Query Frame = 1
BLAST of Csa7G312410.1 vs. NCBI nr
Match: gi|778689258|ref|XP_004152258.2| (PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 97.8 bits (242), Expect = 9.1e-18 Identity = 53/62 (85.48%), Postives = 56/62 (90.32%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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