Csa6G408820 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G408820
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative DUF21 domain-containing protein
Location	Chr6 : 18785493 .. 18787349 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCATTACTTTTTTCAATCAAGTCCATTATCTGTAACACAAGTGAAATTGTAGAAATTAAGATGGAATTCTTTTTTAATGATACATTGGGTTGTTAATCTCGCTCATAGGCTTGACGCTACAAGATTTTGAGGCAACTTTATGATTACTTTGTTGTGAAAAAAATTCACAGAAAGTGGTGAATGAACTTTCTGGAATTGCAGACCGCAGTGGTGGTTATGACACCAATAGAATCAACATTTTCTTTGGATGTGAATTCCAACTTGGGCAATATCAAAGTCATGATTAATTTATTTCTTGTCAAACCTTGTTTTCCTGTGGATCTATTAATAATGATGATGCGAATATCTTCTGAGAAAGTTTCATTGTTTAAATATTTGAGTTGCGTAGAACTTGGGCAATATCAGGTTGGGTTTATCATGTTCATCATATTACATCTTTGCACTAATTTTTGTTTTGAAAGGAGACGAGTCTCAATTATTAATAAAATAAATCCAAAATTCAAAGTACATGAGAATTATACAAAGCACACAAACGAAGAGATTAAGGATCAGGATGTGTACTCAAACACAACTAGGTTGACACATTTTTAGCACCCTCATAATATCCTAAAAAAAAACTAGTATCAAACGATTAAGGAATCTCGAGAAAACAGTGGTAACCCATATAAGAATCCGAGAGGAAATGAATAATCTGTTTTCTTTCTTTCTTAGAGTTGTAGTTAACATGAACGTAGGTCCACGTTCTTCTCGAGTATCAGGAATGAATTCTTTTTGTTATTGACTTCAGAGCTAGGAATTAAACATATCCAATGAGATTTTCAAGTATGCTGGTGGTGGTTGTTCTTTTTGCTTAATTCTGTTTTTATTTTGCGGGGCAAAACATGTTAGTCGTTCGGACCTCAATGGACTAAGTTAAAACACTGGAGACAAATTTTACCTTTCATTTTTTCTGCTTATCTTCTAGAGACAAATTAATCTCCTTCACTAACCAAGGTGTCATTTGAATCTTTGATAATCTTTTTGTTTTCTACTTTTGGCTTTTGTTTTTGTTTTTTCAGGAACAGGTTGTTGTTGTTGGGTAAATAATTATTAATTGCATTTGCATGGTTTTTGTTTTTACAGACAGAAAAACCAAAAACTGAATACAGAAAGGTCAAACTAAACTGCACTGAGTAATTTCCAACTGATTATTATCCTATTTCTTGTTTAGGCTGGGGAAACCATTGAAAAAGTCCTTGCATGAGGTCATAGTCGTGTCCCAGTCTATTATGAGAACCCAAAGAATATTTGGTCTCCTACAGGTATCAGTAGAATAATTTTATAATGCCTTATAATTTTCAACCTCCATTTGATTTCTATGTTTCTTTCGAAATGCAATGGCAAGCTCTCAAGAATAGGCAATAACATCATTCATTTTCTTACAAAGAAATTCCAGTTTTCTTGTGGTAGATGTTTTCCTTTGATTGTTGAACCCTTCAGTATCCTTTTCAATTAGTTTGATTTTCTTTTTTTTCGTCCTGGATTTAGGTGAAAAGTCTACTGACTGTAACAGCAGAAGCTGAAACTCCAGTCGGTGCTGTTTCCATAAGGAGAATTCATAGGTAATGAATGCTCTTTCCTTGAATCTAATCATAAATGATTTCATCTCTTATATGTTCTACAGGGTTCCTTCAGATATTCCATTATATGATATCCTAAATGTATTCCAAAAGGGAAACAATCATATGGTCGTTGTAGTCAAGGTCAAGGAGAAGACTAAGAACTCTGCGCTTTCCAGTAATGGAGAGAAACATGGGGAAAAGTCTTTTACCTCTGGGATATCTCCACTTGTCACTCCCTTGCTCACAAAACATTGA

mRNA sequence

ATGAACTTTCTGGAATTGCAGACCGCAGTGGTGGTTATGACACCAATAGAATCAACATTTTCTTTGGATGTGAATTCCAACTTGGGCAATATCAAAGTCATGATTAATTTATTTCTTGTCAAACCTTGTTTTCCTGTGGATCTATTAATAATGATGATGCGAATATCTTCTGAGAAAGTTTCATTGTTTAAATATTTGAGTTGCGTAGAACTTGGGCAATATCAGGAACAGGTTGTTGTTGTTGGGCTGGGGAAACCATTGAAAAAGTCCTTGCATGAGGTCATAGTCGTGTCCCAGTCTATTATGAGAACCCAAAGAATATTTGGTCTCCTACAGGTGAAAAGTCTACTGACTGTAACAGCAGAAGCTGAAACTCCAGTCGGTGCTGTTTCCATAAGGAGAATTCATAGGGTTCCTTCAGATATTCCATTATATGATATCCTAAATGTATTCCAAAAGGGAAACAATCATATGGTCGTTGTAGTCAAGGTCAAGGAGAAGACTAAGAACTCTGCGCTTTCCAGTAATGGAGAGAAACATGGGGAAAAGTCTTTTACCTCTGGGATATCTCCACTTGTCACTCCCTTGCTCACAAAACATTGA

Coding sequence (CDS)

ATGAACTTTCTGGAATTGCAGACCGCAGTGGTGGTTATGACACCAATAGAATCAACATTTTCTTTGGATGTGAATTCCAACTTGGGCAATATCAAAGTCATGATTAATTTATTTCTTGTCAAACCTTGTTTTCCTGTGGATCTATTAATAATGATGATGCGAATATCTTCTGAGAAAGTTTCATTGTTTAAATATTTGAGTTGCGTAGAACTTGGGCAATATCAGGAACAGGTTGTTGTTGTTGGGCTGGGGAAACCATTGAAAAAGTCCTTGCATGAGGTCATAGTCGTGTCCCAGTCTATTATGAGAACCCAAAGAATATTTGGTCTCCTACAGGTGAAAAGTCTACTGACTGTAACAGCAGAAGCTGAAACTCCAGTCGGTGCTGTTTCCATAAGGAGAATTCATAGGGTTCCTTCAGATATTCCATTATATGATATCCTAAATGTATTCCAAAAGGGAAACAATCATATGGTCGTTGTAGTCAAGGTCAAGGAGAAGACTAAGAACTCTGCGCTTTCCAGTAATGGAGAGAAACATGGGGAAAAGTCTTTTACCTCTGGGATATCTCCACTTGTCACTCCCTTGCTCACAAAACATTGA

Protein sequence

MNFLELQTAVVVMTPIESTFSLDVNSNLGNIKVMINLFLVKPCFPVDLLIMMMRISSEKVSLFKYLSCVELGQYQEQVVVVGLGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH*

Homology

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BLAST of Csa6G408820 vs. Swiss-Prot
Match: Y1327_ARATH (Putative DUF21 domain-containing protein At1g03270 OS=Arabidopsis thaliana GN=CBSDUF4 PE=4 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 1.7e-20
Identity = 60/98 (61.22%), Postives = 66/98 (67.35%), Query Frame = 1


Query: 105 QRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKV 164
           + I GLL VKSLLTV AE E PV +VSIR+I RVPSD+PLYDILN FQKG++HM  VVKV
Sbjct: 269 KNIIGLLLVKSLLTVRAETEAPVSSVSIRKIPRVPSDMPLYDILNEFQKGSSHMAAVVKV 328

Query: 165 KEKTK--NSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           K+K K  N  L SNGE   E       S L  PLL KH
Sbjct: 329 KDKDKKNNMQLLSNGETPKENMKFYQSSNLTAPLL-KH 365

HSP 2 Score: 35.8 bits (81), Expect = 6.6e-01
Identity = 26/63 (41.27%), Postives = 27/63 (42.86%), Query Frame = 1


Query: 4   LELQTAVVVMTPIESTFSLDVNSN--------------------LGNIKVMINLFLVKPC 47
           L  +TA   MTPIESTFSLDVN+                     LGN K +I L LVK  
Sbjct: 221 LSQKTAEEAMTPIESTFSLDVNTKLDWETIGKILSRGHSRIPVYLGNPKNIIGLLLVKSL 280

[Close]

BLAST of Csa6G408820 vs. Swiss-Prot
Match: Y4423_ARATH (DUF21 domain-containing protein At4g14230 OS=Arabidopsis thaliana GN=CBSDUF2 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.4e-19
Identity = 52/95 (54.74%), Postives = 62/95 (65.26%), Query Frame = 1


Query: 105 QRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKV 164
           + + GLL VKSLLTV  E  T V AV IRRI RVP+++PLYDILN FQKG++HM  VVKV
Sbjct: 270 KNVIGLLLVKSLLTVRPETGTLVSAVGIRRIPRVPANMPLYDILNEFQKGSSHMAAVVKV 329

Query: 165 KEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTK 200
           K K+K    + + E  GE + +S  S L  PLL K
Sbjct: 330 KGKSKGHPSTLHEENSGESNVSSNNSELTAPLLLK 364

HSP 2 Score: 35.0 bits (79), Expect = 1.1e+00
Identity = 17/22 (77.27%), Postives = 16/22 (72.73%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL 29
           +TA   MTPIESTFSLDVNS L
Sbjct: 225 KTAQEAMTPIESTFSLDVNSKL 246

[Close]

BLAST of Csa6G408820 vs. Swiss-Prot
Match: Y4424_ARATH (DUF21 domain-containing protein At4g14240 OS=Arabidopsis thaliana GN=CBSDUF1 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-17
Identity = 60/117 (51.28%), Postives = 72/117 (61.54%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S +    + + GLL VKSLLTV  E ET V AV IRRI RVP+D+
Sbjct: 252 MGKILARGHSRVPVYSGN---PKNVIGLLLVKSLLTVRPETETLVSAVCIRRIPRVPADM 311

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTK 200
           PLYDILN FQKG++HM  VVKVK K+K    S+  E+H ++   S  S L  PLL K
Sbjct: 312 PLYDILNEFQKGSSHMAAVVKVKGKSKVPP-STLLEEHTDE---SNDSDLTAPLLLK 361

HSP 2 Score: 36.2 bits (82), Expect = 5.0e-01
Identity = 26/60 (43.33%), Postives = 26/60 (43.33%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL--------------------GNIKVMINLFLVKPCFPV 47
           +TA   MTPIESTFSLDVNS L                    GN K +I L LVK    V
Sbjct: 226 KTAQEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNVIGLLLVKSLLTV 285

[Close]

BLAST of Csa6G408820 vs. Swiss-Prot
Match: Y4370_ARATH (DUF21 domain-containing protein At4g33700 OS=Arabidopsis thaliana GN=CBSDUF6 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-11
Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 1


Query: 107 IFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKE 166
           I GL+ VK+LLT+  + E PV  V+IRRI RVP  +PLYDILN FQKG +HM VVV+  +
Sbjct: 251 IIGLVLVKNLLTINPDEEIPVKNVTIRRIPRVPEILPLYDILNEFQKGLSHMAVVVRQCD 310

Query: 167 K 168
           K
Sbjct: 311 K 311

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BLAST of Csa6G408820 vs. Swiss-Prot
Match: Y2452_ARATH (DUF21 domain-containing protein At2g14520 OS=Arabidopsis thaliana GN=CBSDUF3 PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 4.1e-11
Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 1


Query: 107 IFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKE 166
           I GL+ VK+LLT+  + E  V  V+IRRI RVP  +PLYDILN FQKG++HM VVV+  +
Sbjct: 251 IIGLVLVKNLLTINPDEEIQVKNVTIRRIPRVPETLPLYDILNEFQKGHSHMAVVVRQCD 310

Query: 167 K 168
           K
Sbjct: 311 K 311

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BLAST of Csa6G408820 vs. TrEMBL
Match: A0A0A0KG89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G408820 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 2.9e-104
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1


Query: 1   MNFLELQTAVVVMTPIESTFSLDVNSNLGNIKVMINLFLVKPCFPVDLLIMMMRISSEKV 60
           MNFLELQTAVVVMTPIESTFSLDVNSNLGNIKVMINLFLVKPCFPVDLLIMMMRISSEKV
Sbjct: 1   MNFLELQTAVVVMTPIESTFSLDVNSNLGNIKVMINLFLVKPCFPVDLLIMMMRISSEKV 60

Query: 61  SLFKYLSCVELGQYQEQVVVVGLGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVT 120
           SLFKYLSCVELGQYQEQVVVVGLGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVT
Sbjct: 61  SLFKYLSCVELGQYQEQVVVVGLGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVT 120

Query: 121 AEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKH 180
           AEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKH
Sbjct: 121 AEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKH 180

Query: 181 GEKSFTSGISPLVTPLLTKH 201
           GEKSFTSGISPLVTPLLTKH
Sbjct: 181 GEKSFTSGISPLVTPLLTKH 200

[Close]

BLAST of Csa6G408820 vs. TrEMBL
Match: B9T4A2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0176310 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.9e-24
Identity = 69/118 (58.47%), Postives = 81/118 (68.64%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S      + I GLL VKSLLTV AE ETPV AVSIRRI RVPS++
Sbjct: 250 IGKILARGHSRVPVYSGC---PKNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPSNM 309

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           PLYDILN FQKG++HM  VVKV  K+KN+  +S+GEK  E  F +G S L  PLLTKH
Sbjct: 310 PLYDILNEFQKGSSHMAAVVKVHAKSKNAQPTSDGEKFNEIKFANGDSQLNAPLLTKH 364

[Close]

BLAST of Csa6G408820 vs. TrEMBL
Match: B9T4A2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0176310 PE=4 SV=1)

HSP 1 Score: 35.0 bits (79), Expect = 1.2e+02
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL 29
           +TA   MTPIESTFSLDVNS L
Sbjct: 224 KTAEEAMTPIESTFSLDVNSKL 245

HSP 2 Score: 119.4 bits (298), Expect = 5.0e-24
Identity = 63/96 (65.62%), Postives = 72/96 (75.00%), Query Frame = 1


Query: 105 QRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKV 164
           + I GLL VKSLLTV AE ETPV AVSIRRI RVP+ +PLYDILN FQKG++HM  VVKV
Sbjct: 271 KNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPAHMPLYDILNEFQKGSSHMAAVVKV 330

Query: 165 KEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           KEKTK+     +GEK  E   T+G S L TPLLTK+
Sbjct: 331 KEKTKDPEFFDDGEKFDEHRVTNGNSQLTTPLLTKY 366

[Close]

BLAST of Csa6G408820 vs. TrEMBL
Match: A0A061DQY0_THECC (CBS domain-containing protein with a domain of Uncharacterized protein function isoform 1 OS=Theobroma cacao GN=TCM_004436 PE=4 SV=1)

HSP 1 Score: 36.2 bits (82), Expect = 5.6e+01
Identity = 26/60 (43.33%), Postives = 28/60 (46.67%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL--------------------GNIKVMINLFLVKPCFPV 47
           +TA   MTPIESTFSLDVNS L                    GN K +I L LVK    V
Sbjct: 226 KTAEEAMTPIESTFSLDVNSKLDWEAVGKILARGHSRIPVYAGNPKNIIGLLLVKSLLTV 285

HSP 2 Score: 117.5 bits (293), Expect = 1.9e-23
Identity = 67/118 (56.78%), Postives = 82/118 (69.49%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S +    + I GLL VKSLLTV AE ETPV AVSIRR+ RVP+D+
Sbjct: 256 IGKILARGHSRVPVFSGN---PKNIIGLLLVKSLLTVRAETETPVSAVSIRRMPRVPADM 315

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           PLYDILN FQKG++HM  VVK+K K+K    + +GEK  E +FT+  S L TPLLTKH
Sbjct: 316 PLYDILNEFQKGSSHMAAVVKIKGKSKIPQPALDGEKCEEDTFTNAKSQLTTPLLTKH 370

[Close]

BLAST of Csa6G408820 vs. TrEMBL
Match: W9QKK0_9ROSA (Putative DUF21 domain-containing protein OS=Morus notabilis GN=L484_025039 PE=4 SV=1)

HSP 1 Score: 34.3 bits (77), Expect = 2.1e+02
Identity = 25/60 (41.67%), Postives = 28/60 (46.67%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL--------------------GNIKVMINLFLVKPCFPV 47
           +TA   MTPIESTFSLDV+S L                    GN K +I L LVK    V
Sbjct: 230 KTAEEAMTPIESTFSLDVSSKLDWEAIGKILARGHSRVPVFSGNPKNIIGLLLVKSLLTV 289

HSP 2 Score: 115.5 bits (288), Expect = 7.3e-23
Identity = 70/117 (59.83%), Postives = 78/117 (66.67%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S +    + I GLL VKSLLTV  E ETPV AVSIRRI RVPSD+
Sbjct: 250 MGKILARGHSRVPVYSGN---PKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVPSDM 309

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTK 200
           PLYDILN FQKG++HM  VVK K KTK    +S GEKH E   TSG S L TPLL K
Sbjct: 310 PLYDILNEFQKGSSHMAAVVKSKGKTK--IPTSTGEKHEENKATSGDSQLTTPLLVK 361

[Close]

BLAST of Csa6G408820 vs. TAIR10
Match: AT1G03270.1 (AT1G03270.1 CBS domain-containing protein with a domain of unknown function (DUF21))

HSP 1 Score: 100.9 bits (250), Expect = 9.4e-22
Identity = 60/98 (61.22%), Postives = 66/98 (67.35%), Query Frame = 1


Query: 105 QRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKV 164
           + I GLL VKSLLTV AE E PV +VSIR+I RVPSD+PLYDILN FQKG++HM  VVKV
Sbjct: 269 KNIIGLLLVKSLLTVRAETEAPVSSVSIRKIPRVPSDMPLYDILNEFQKGSSHMAAVVKV 328

Query: 165 KEKTK--NSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           K+K K  N  L SNGE   E       S L  PLL KH
Sbjct: 329 KDKDKKNNMQLLSNGETPKENMKFYQSSNLTAPLL-KH 365

HSP 2 Score: 35.8 bits (81), Expect = 3.7e-02
Identity = 26/63 (41.27%), Postives = 27/63 (42.86%), Query Frame = 1


Query: 4   LELQTAVVVMTPIESTFSLDVNSN--------------------LGNIKVMINLFLVKPC 47
           L  +TA   MTPIESTFSLDVN+                     LGN K +I L LVK  
Sbjct: 221 LSQKTAEEAMTPIESTFSLDVNTKLDWETIGKILSRGHSRIPVYLGNPKNIIGLLLVKSL 280

[Close]

BLAST of Csa6G408820 vs. TAIR10
Match: AT4G14230.1 (AT4G14230.1 CBS domain-containing protein with a domain of unknown function (DUF21))

HSP 1 Score: 95.9 bits (237), Expect = 3.0e-20
Identity = 52/95 (54.74%), Postives = 62/95 (65.26%), Query Frame = 1


Query: 105 QRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKV 164
           + + GLL VKSLLTV  E  T V AV IRRI RVP+++PLYDILN FQKG++HM  VVKV
Sbjct: 270 KNVIGLLLVKSLLTVRPETGTLVSAVGIRRIPRVPANMPLYDILNEFQKGSSHMAAVVKV 329

Query: 165 KEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTK 200
           K K+K    + + E  GE + +S  S L  PLL K
Sbjct: 330 KGKSKGHPSTLHEENSGESNVSSNNSELTAPLLLK 364

HSP 2 Score: 35.0 bits (79), Expect = 6.3e-02
Identity = 17/22 (77.27%), Postives = 16/22 (72.73%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL 29
           +TA   MTPIESTFSLDVNS L
Sbjct: 225 KTAQEAMTPIESTFSLDVNSKL 246

[Close]

BLAST of Csa6G408820 vs. TAIR10
Match: AT4G14240.1 (AT4G14240.1 CBS domain-containing protein with a domain of unknown function (DUF21))

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-18
Identity = 60/117 (51.28%), Postives = 72/117 (61.54%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S +    + + GLL VKSLLTV  E ET V AV IRRI RVP+D+
Sbjct: 252 MGKILARGHSRVPVYSGN---PKNVIGLLLVKSLLTVRPETETLVSAVCIRRIPRVPADM 311

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTK 200
           PLYDILN FQKG++HM  VVKVK K+K    S+  E+H ++   S  S L  PLL K
Sbjct: 312 PLYDILNEFQKGSSHMAAVVKVKGKSKVPP-STLLEEHTDE---SNDSDLTAPLLLK 361

HSP 2 Score: 36.2 bits (82), Expect = 2.8e-02
Identity = 26/60 (43.33%), Postives = 26/60 (43.33%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL--------------------GNIKVMINLFLVKPCFPV 47
           +TA   MTPIESTFSLDVNS L                    GN K +I L LVK    V
Sbjct: 226 KTAQEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNVIGLLLVKSLLTV 285

[Close]

BLAST of Csa6G408820 vs. TAIR10
Match: AT4G33700.1 (AT4G33700.1 CBS domain-containing protein with a domain of unknown function (DUF21))

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12
Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 1


Query: 107 IFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKE 166
           I GL+ VK+LLT+  + E PV  V+IRRI RVP  +PLYDILN FQKG +HM VVV+  +
Sbjct: 251 IIGLVLVKNLLTINPDEEIPVKNVTIRRIPRVPEILPLYDILNEFQKGLSHMAVVVRQCD 310

Query: 167 K 168
           K
Sbjct: 311 K 311

[Close]

BLAST of Csa6G408820 vs. TAIR10
Match: AT2G14520.1 (AT2G14520.1 CBS domain-containing protein with a domain of unknown function (DUF21))

HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12
Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 1


Query: 107 IFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKE 166
           I GL+ VK+LLT+  + E  V  V+IRRI RVP  +PLYDILN FQKG++HM VVV+  +
Sbjct: 251 IIGLVLVKNLLTINPDEEIQVKNVTIRRIPRVPETLPLYDILNEFQKGHSHMAVVVRQCD 310

Query: 167 K 168
           K
Sbjct: 311 K 311

[Close]

BLAST of Csa6G408820 vs. NCBI nr
Match: gi|700192670|gb|KGN47874.1| (hypothetical protein Csa_6G408820 [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 4.1e-104
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1


Query: 1   MNFLELQTAVVVMTPIESTFSLDVNSNLGNIKVMINLFLVKPCFPVDLLIMMMRISSEKV 60
           MNFLELQTAVVVMTPIESTFSLDVNSNLGNIKVMINLFLVKPCFPVDLLIMMMRISSEKV
Sbjct: 1   MNFLELQTAVVVMTPIESTFSLDVNSNLGNIKVMINLFLVKPCFPVDLLIMMMRISSEKV 60

Query: 61  SLFKYLSCVELGQYQEQVVVVGLGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVT 120
           SLFKYLSCVELGQYQEQVVVVGLGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVT
Sbjct: 61  SLFKYLSCVELGQYQEQVVVVGLGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVT 120

Query: 121 AEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKH 180
           AEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKH
Sbjct: 121 AEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKH 180

Query: 181 GEKSFTSGISPLVTPLLTKH 201
           GEKSFTSGISPLVTPLLTKH
Sbjct: 181 GEKSFTSGISPLVTPLLTKH 200

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BLAST of Csa6G408820 vs. NCBI nr
Match: gi|223527135|gb|EEF29310.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 119.8 bits (299), Expect = 5.5e-24
Identity = 69/118 (58.47%), Postives = 81/118 (68.64%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S      + I GLL VKSLLTV AE ETPV AVSIRRI RVPS++
Sbjct: 250 IGKILARGHSRVPVYSGC---PKNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPSNM 309

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           PLYDILN FQKG++HM  VVKV  K+KN+  +S+GEK  E  F +G S L  PLLTKH
Sbjct: 310 PLYDILNEFQKGSSHMAAVVKVHAKSKNAQPTSDGEKFNEIKFANGDSQLNAPLLTKH 364

[Close]

BLAST of Csa6G408820 vs. NCBI nr
Match: gi|223527135|gb|EEF29310.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 35.0 bits (79), Expect = 1.8e+02
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL 29
           +TA   MTPIESTFSLDVNS L
Sbjct: 224 KTAEEAMTPIESTFSLDVNSKL 245

HSP 2 Score: 119.8 bits (299), Expect = 5.5e-24
Identity = 69/118 (58.47%), Postives = 81/118 (68.64%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S      + I GLL VKSLLTV AE ETPV AVSIRRI RVPS++
Sbjct: 250 IGKILARGHSRVPVYSGC---PKNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPSNM 309

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           PLYDILN FQKG++HM  VVKV  K+KN+  +S+GEK  E  F +G S L  PLLTKH
Sbjct: 310 PLYDILNEFQKGSSHMAAVVKVHAKSKNAQPTSDGEKFNEIKFANGDSQLNAPLLTKH 364

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BLAST of Csa6G408820 vs. NCBI nr
Match: gi|1000939687|ref|XP_015583232.1| (PREDICTED: uncharacterized protein LOC8266776 [Ricinus communis])

HSP 1 Score: 35.0 bits (79), Expect = 1.8e+02
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL 29
           +TA   MTPIESTFSLDVNS L
Sbjct: 224 KTAEEAMTPIESTFSLDVNSKL 245

HSP 2 Score: 119.4 bits (298), Expect = 7.2e-24
Identity = 63/96 (65.62%), Postives = 72/96 (75.00%), Query Frame = 1


Query: 105 QRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKV 164
           + I GLL VKSLLTV AE ETPV AVSIRRI RVP+ +PLYDILN FQKG++HM  VVKV
Sbjct: 271 KNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPAHMPLYDILNEFQKGSSHMAAVVKV 330

Query: 165 KEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           KEKTK+     +GEK  E   T+G S L TPLLTK+
Sbjct: 331 KEKTKDPEFFDDGEKFDEHRVTNGNSQLTTPLLTKY 366

[Close]

BLAST of Csa6G408820 vs. NCBI nr
Match: gi|590717685|ref|XP_007050665.1| (CBS domain-containing protein with a domain of Uncharacterized protein function isoform 1 [Theobroma cacao])

HSP 1 Score: 36.2 bits (82), Expect = 8.0e+01
Identity = 26/60 (43.33%), Postives = 28/60 (46.67%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL--------------------GNIKVMINLFLVKPCFPV 47
           +TA   MTPIESTFSLDVNS L                    GN K +I L LVK    V
Sbjct: 226 KTAEEAMTPIESTFSLDVNSKLDWEAVGKILARGHSRIPVYAGNPKNIIGLLLVKSLLTV 285

HSP 2 Score: 117.5 bits (293), Expect = 2.7e-23
Identity = 67/118 (56.78%), Postives = 82/118 (69.49%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S +    + I GLL VKSLLTV AE ETPV AVSIRR+ RVP+D+
Sbjct: 256 IGKILARGHSRVPVFSGN---PKNIIGLLLVKSLLTVRAETETPVSAVSIRRMPRVPADM 315

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           PLYDILN FQKG++HM  VVK+K K+K    + +GEK  E +FT+  S L TPLLTKH
Sbjct: 316 PLYDILNEFQKGSSHMAAVVKIKGKSKIPQPALDGEKCEEDTFTNAKSQLTTPLLTKH 370

The following BLAST results are available for this feature:

BLAST of Csa6G408820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1327_ARATH	1.7e-20	61.22	Putative DUF21 domain-containing protein At1g03270 OS=Arabidopsis thaliana GN=CB...	[more]
Y4423_ARATH	5.4e-19	54.74	DUF21 domain-containing protein At4g14230 OS=Arabidopsis thaliana GN=CBSDUF2 PE=...	[more]
Y4424_ARATH	2.3e-17	51.28	DUF21 domain-containing protein At4g14240 OS=Arabidopsis thaliana GN=CBSDUF1 PE=...	[more]
Y4370_ARATH	2.4e-11	59.02	DUF21 domain-containing protein At4g33700 OS=Arabidopsis thaliana GN=CBSDUF6 PE=...	[more]
Y2452_ARATH	4.1e-11	57.38	DUF21 domain-containing protein At2g14520 OS=Arabidopsis thaliana GN=CBSDUF3 PE=...	[more]

BLAST of Csa6G408820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG89_CUCSA	2.9e-104	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G408820 PE=4 SV=1	[more]
B9T4A2_RICCO	3.9e-24	58.47	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0176310 PE=4 SV=1	[more]
B9T4A2_RICCO	1.2e+02	77.27	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0176310 PE=4 SV=1	[more]
A0A061DQY0_THECC	5.6e+01	43.33	CBS domain-containing protein with a domain of Uncharacterized protein function ...	[more]
W9QKK0_9ROSA	2.1e+02	41.67	Putative DUF21 domain-containing protein OS=Morus notabilis GN=L484_025039 PE=4 ...	[more]

BLAST of Csa6G408820 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G03270.1	9.4e-22	61.22	CBS domain-containing protein with a domain of unknown function (DUF...	[more]
AT4G14230.1	3.0e-20	54.74	CBS domain-containing protein with a domain of unknown function (DUF...	[more]
AT4G14240.1	1.3e-18	51.28	CBS domain-containing protein with a domain of unknown function (DUF...	[more]
AT4G33700.1	1.4e-12	59.02	CBS domain-containing protein with a domain of unknown function (DUF...	[more]
AT2G14520.1	2.3e-12	57.38	CBS domain-containing protein with a domain of unknown function (DUF...	[more]

BLAST of Csa6G408820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700192670\|gb\|KGN47874.1\|	4.1e-104	100.00	hypothetical protein Csa_6G408820 [Cucumis sativus]	[more]
gi\|223527135\|gb\|EEF29310.1\|	5.5e-24	58.47	conserved hypothetical protein [Ricinus communis]	[more]
gi\|223527135\|gb\|EEF29310.1\|	1.8e+02	77.27	conserved hypothetical protein [Ricinus communis]	[more]
gi\|1000939687\|ref\|XP_015583232.1\|	1.8e+02	77.27	PREDICTED: uncharacterized protein LOC8266776 [Ricinus communis]	[more]
gi\|590717685\|ref\|XP_007050665.1\|	8.0e+01	43.33	CBS domain-containing protein with a domain of Uncharacterized protein function ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU086193	cucumber EST collection version 3.0	transcribed_cluster
CU159180	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G408820.1	Csa6G408820.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU086193	CU086193	transcribed_cluster
CU159180	CU159180	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.580.10		coord: 101..166 score: 6.
None	No IPR available	PANTHER	PTHR12064	ANCIENT CONSERVED DOMAIN PROTEIN-RELATED	coord: 101..167 score: 1.7E-32coord: 4..48 score: 1.7
None	No IPR available	PANTHER	PTHR12064:SF33	SUBFAMILY NOT NAMED	coord: 101..167 score: 1.7E-32coord: 4..48 score: 1.7
None	No IPR available	unknown	SSF54631	CBS-domain pair	coord: 76..163 score: 5.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G408820	Cla006081	Watermelon (97103) v1	cuwmB485
Csa6G408820	ClCG07G000030	Watermelon (Charleston Gray)	cuwcgB492
Csa6G408820	Lsi05G009020	Bottle gourd (USVL1VR-Ls)	culsiB459
Csa6G408820	Cla97C07G128280	Watermelon (97103) v2	cuwmbB486
Csa6G408820	Bhi05G000273	Wax gourd	cuwgoB566
Csa6G408820	CSPI06G21850	Wild cucumber (PI 183967)	cpicuB313
Csa6G408820	Cucsa.184300	Cucumber (Gy14) v1	cgycuB282
Csa6G408820	CmaCh19G000520	Cucurbita maxima (Rimu)	cmacuB524
Csa6G408820	CmoCh19G000510	Cucurbita moschata (Rifu)	cmocuB516
Csa6G408820	Cp4.1LG15g00500	Cucurbita pepo (Zucchini)	cpecuB253
Csa6G408820	CsGy6G021120	Cucumber (Gy14) v2	cgybcuB281
Csa6G408820	Carg16852	Silver-seed gourd	carcuB0771

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G408820	Cucurbita pepo (Zucchini)	cpecuB255
Csa6G408820	Cucurbita pepo (Zucchini)	cpecuB748
Csa6G408820	Silver-seed gourd	carcuB0772
Csa6G408820	Watermelon (97103) v2	cuwmbB479
Csa6G408820	Wax gourd	cuwgoB568
Csa6G408820	Cucurbita maxima (Rimu)	cmacuB525
Csa6G408820	Cucurbita maxima (Rimu)	cmacuB628
Csa6G408820	Cucurbita maxima (Rimu)	cmacuB637
Csa6G408820	Cucurbita moschata (Rifu)	cmocuB517
Csa6G408820	Cucurbita moschata (Rifu)	cmocuB618
Csa6G408820	Cucurbita moschata (Rifu)	cmocuB627
Csa6G408820	Watermelon (Charleston Gray)	cuwcgB487
Csa6G408820	Watermelon (97103) v1	cuwmB489