Csa6G408820.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G408820.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative DUF21 domain-containing protein
Location	Chr6 : 18785493 .. 18787349 (-)
Sequence length	603

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCATTACTTTTTTCAATCAAGTCCATTATCTGTAACACAAGTGAAATTGTAGAAATTAAGATGGAATTCTTTTTTAATGATACATTGGGTTGTTAATCTCGCTCATAGGCTTGACGCTACAAGATTTTGAGGCAACTTTATGATTACTTTGTTGTGAAAAAAATTCACAGAAAGTGGTGAATGAACTTTCTGGAATTGCAGACCGCAGTGGTGGTTATGACACCAATAGAATCAACATTTTCTTTGGATGTGAATTCCAACTTGGGCAATATCAAAGTCATGATTAATTTATTTCTTGTCAAACCTTGTTTTCCTGTGGATCTATTAATAATGATGATGCGAATATCTTCTGAGAAAGTTTCATTGTTTAAATATTTGAGTTGCGTAGAACTTGGGCAATATCAGGTTGGGTTTATCATGTTCATCATATTACATCTTTGCACTAATTTTTGTTTTGAAAGGAGACGAGTCTCAATTATTAATAAAATAAATCCAAAATTCAAAGTACATGAGAATTATACAAAGCACACAAACGAAGAGATTAAGGATCAGGATGTGTACTCAAACACAACTAGGTTGACACATTTTTAGCACCCTCATAATATCCTAAAAAAAAACTAGTATCAAACGATTAAGGAATCTCGAGAAAACAGTGGTAACCCATATAAGAATCCGAGAGGAAATGAATAATCTGTTTTCTTTCTTTCTTAGAGTTGTAGTTAACATGAACGTAGGTCCACGTTCTTCTCGAGTATCAGGAATGAATTCTTTTTGTTATTGACTTCAGAGCTAGGAATTAAACATATCCAATGAGATTTTCAAGTATGCTGGTGGTGGTTGTTCTTTTTGCTTAATTCTGTTTTTATTTTGCGGGGCAAAACATGTTAGTCGTTCGGACCTCAATGGACTAAGTTAAAACACTGGAGACAAATTTTACCTTTCATTTTTTCTGCTTATCTTCTAGAGACAAATTAATCTCCTTCACTAACCAAGGTGTCATTTGAATCTTTGATAATCTTTTTGTTTTCTACTTTTGGCTTTTGTTTTTGTTTTTTCAGGAACAGGTTGTTGTTGTTGGGTAAATAATTATTAATTGCATTTGCATGGTTTTTGTTTTTACAGACAGAAAAACCAAAAACTGAATACAGAAAGGTCAAACTAAACTGCACTGAGTAATTTCCAACTGATTATTATCCTATTTCTTGTTTAGGCTGGGGAAACCATTGAAAAAGTCCTTGCATGAGGTCATAGTCGTGTCCCAGTCTATTATGAGAACCCAAAGAATATTTGGTCTCCTACAGGTATCAGTAGAATAATTTTATAATGCCTTATAATTTTCAACCTCCATTTGATTTCTATGTTTCTTTCGAAATGCAATGGCAAGCTCTCAAGAATAGGCAATAACATCATTCATTTTCTTACAAAGAAATTCCAGTTTTCTTGTGGTAGATGTTTTCCTTTGATTGTTGAACCCTTCAGTATCCTTTTCAATTAGTTTGATTTTCTTTTTTTTCGTCCTGGATTTAGGTGAAAAGTCTACTGACTGTAACAGCAGAAGCTGAAACTCCAGTCGGTGCTGTTTCCATAAGGAGAATTCATAGGTAATGAATGCTCTTTCCTTGAATCTAATCATAAATGATTTCATCTCTTATATGTTCTACAGGGTTCCTTCAGATATTCCATTATATGATATCCTAAATGTATTCCAAAAGGGAAACAATCATATGGTCGTTGTAGTCAAGGTCAAGGAGAAGACTAAGAACTCTGCGCTTTCCAGTAATGGAGAGAAACATGGGGAAAAGTCTTTTACCTCTGGGATATCTCCACTTGTCACTCCCTTGCTCACAAAACATTGA

mRNA sequence

ATGAACTTTCTGGAATTGCAGACCGCAGTGGTGGTTATGACACCAATAGAATCAACATTTTCTTTGGATGTGAATTCCAACTTGGGCAATATCAAAGTCATGATTAATTTATTTCTTGTCAAACCTTGTTTTCCTGTGGATCTATTAATAATGATGATGCGAATATCTTCTGAGAAAGTTTCATTGTTTAAATATTTGAGTTGCGTAGAACTTGGGCAATATCAGGAACAGGTTGTTGTTGTTGGGCTGGGGAAACCATTGAAAAAGTCCTTGCATGAGGTCATAGTCGTGTCCCAGTCTATTATGAGAACCCAAAGAATATTTGGTCTCCTACAGGTGAAAAGTCTACTGACTGTAACAGCAGAAGCTGAAACTCCAGTCGGTGCTGTTTCCATAAGGAGAATTCATAGGGTTCCTTCAGATATTCCATTATATGATATCCTAAATGTATTCCAAAAGGGAAACAATCATATGGTCGTTGTAGTCAAGGTCAAGGAGAAGACTAAGAACTCTGCGCTTTCCAGTAATGGAGAGAAACATGGGGAAAAGTCTTTTACCTCTGGGATATCTCCACTTGTCACTCCCTTGCTCACAAAACATTGA

Coding sequence (CDS)

ATGAACTTTCTGGAATTGCAGACCGCAGTGGTGGTTATGACACCAATAGAATCAACATTTTCTTTGGATGTGAATTCCAACTTGGGCAATATCAAAGTCATGATTAATTTATTTCTTGTCAAACCTTGTTTTCCTGTGGATCTATTAATAATGATGATGCGAATATCTTCTGAGAAAGTTTCATTGTTTAAATATTTGAGTTGCGTAGAACTTGGGCAATATCAGGAACAGGTTGTTGTTGTTGGGCTGGGGAAACCATTGAAAAAGTCCTTGCATGAGGTCATAGTCGTGTCCCAGTCTATTATGAGAACCCAAAGAATATTTGGTCTCCTACAGGTGAAAAGTCTACTGACTGTAACAGCAGAAGCTGAAACTCCAGTCGGTGCTGTTTCCATAAGGAGAATTCATAGGGTTCCTTCAGATATTCCATTATATGATATCCTAAATGTATTCCAAAAGGGAAACAATCATATGGTCGTTGTAGTCAAGGTCAAGGAGAAGACTAAGAACTCTGCGCTTTCCAGTAATGGAGAGAAACATGGGGAAAAGTCTTTTACCTCTGGGATATCTCCACTTGTCACTCCCTTGCTCACAAAACATTGA

Protein sequence

MNFLELQTAVVVMTPIESTFSLDVNSNLGNIKVMINLFLVKPCFPVDLLIMMMRISSEKVSLFKYLSCVELGQYQEQVVVVGLGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH*

Homology

[Close]

BLAST of Csa6G408820.1 vs. Swiss-Prot
Match: Y1327_ARATH (Putative DUF21 domain-containing protein At1g03270 OS=Arabidopsis thaliana GN=CBSDUF4 PE=4 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 1.7e-20
Identity = 60/98 (61.22%), Postives = 66/98 (67.35%), Query Frame = 1


Query: 105 QRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKV 164
           + I GLL VKSLLTV AE E PV +VSIR+I RVPSD+PLYDILN FQKG++HM  VVKV
Sbjct: 269 KNIIGLLLVKSLLTVRAETEAPVSSVSIRKIPRVPSDMPLYDILNEFQKGSSHMAAVVKV 328

Query: 165 KEKTK--NSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           K+K K  N  L SNGE   E       S L  PLL KH
Sbjct: 329 KDKDKKNNMQLLSNGETPKENMKFYQSSNLTAPLL-KH 365

HSP 2 Score: 35.8 bits (81), Expect = 6.6e-01
Identity = 26/63 (41.27%), Postives = 27/63 (42.86%), Query Frame = 1


Query: 4   LELQTAVVVMTPIESTFSLDVNSN--------------------LGNIKVMINLFLVKPC 47
           L  +TA   MTPIESTFSLDVN+                     LGN K +I L LVK  
Sbjct: 221 LSQKTAEEAMTPIESTFSLDVNTKLDWETIGKILSRGHSRIPVYLGNPKNIIGLLLVKSL 280

[Close]

BLAST of Csa6G408820.1 vs. Swiss-Prot
Match: Y4423_ARATH (DUF21 domain-containing protein At4g14230 OS=Arabidopsis thaliana GN=CBSDUF2 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.4e-19
Identity = 52/95 (54.74%), Postives = 62/95 (65.26%), Query Frame = 1


Query: 105 QRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKV 164
           + + GLL VKSLLTV  E  T V AV IRRI RVP+++PLYDILN FQKG++HM  VVKV
Sbjct: 270 KNVIGLLLVKSLLTVRPETGTLVSAVGIRRIPRVPANMPLYDILNEFQKGSSHMAAVVKV 329

Query: 165 KEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTK 200
           K K+K    + + E  GE + +S  S L  PLL K
Sbjct: 330 KGKSKGHPSTLHEENSGESNVSSNNSELTAPLLLK 364

HSP 2 Score: 35.0 bits (79), Expect = 1.1e+00
Identity = 17/22 (77.27%), Postives = 16/22 (72.73%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL 29
           +TA   MTPIESTFSLDVNS L
Sbjct: 225 KTAQEAMTPIESTFSLDVNSKL 246

[Close]

BLAST of Csa6G408820.1 vs. Swiss-Prot
Match: Y4424_ARATH (DUF21 domain-containing protein At4g14240 OS=Arabidopsis thaliana GN=CBSDUF1 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-17
Identity = 60/117 (51.28%), Postives = 72/117 (61.54%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S +    + + GLL VKSLLTV  E ET V AV IRRI RVP+D+
Sbjct: 252 MGKILARGHSRVPVYSGN---PKNVIGLLLVKSLLTVRPETETLVSAVCIRRIPRVPADM 311

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTK 200
           PLYDILN FQKG++HM  VVKVK K+K    S+  E+H ++   S  S L  PLL K
Sbjct: 312 PLYDILNEFQKGSSHMAAVVKVKGKSKVPP-STLLEEHTDE---SNDSDLTAPLLLK 361

HSP 2 Score: 36.2 bits (82), Expect = 5.0e-01
Identity = 26/60 (43.33%), Postives = 26/60 (43.33%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL--------------------GNIKVMINLFLVKPCFPV 47
           +TA   MTPIESTFSLDVNS L                    GN K +I L LVK    V
Sbjct: 226 KTAQEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNVIGLLLVKSLLTV 285

[Close]

BLAST of Csa6G408820.1 vs. Swiss-Prot
Match: Y4370_ARATH (DUF21 domain-containing protein At4g33700 OS=Arabidopsis thaliana GN=CBSDUF6 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-11
Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 1


Query: 107 IFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKE 166
           I GL+ VK+LLT+  + E PV  V+IRRI RVP  +PLYDILN FQKG +HM VVV+  +
Sbjct: 251 IIGLVLVKNLLTINPDEEIPVKNVTIRRIPRVPEILPLYDILNEFQKGLSHMAVVVRQCD 310

Query: 167 K 168
           K
Sbjct: 311 K 311

[Close]

BLAST of Csa6G408820.1 vs. Swiss-Prot
Match: Y2452_ARATH (DUF21 domain-containing protein At2g14520 OS=Arabidopsis thaliana GN=CBSDUF3 PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 4.1e-11
Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 1


Query: 107 IFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKE 166
           I GL+ VK+LLT+  + E  V  V+IRRI RVP  +PLYDILN FQKG++HM VVV+  +
Sbjct: 251 IIGLVLVKNLLTINPDEEIQVKNVTIRRIPRVPETLPLYDILNEFQKGHSHMAVVVRQCD 310

Query: 167 K 168
           K
Sbjct: 311 K 311

[Close]

BLAST of Csa6G408820.1 vs. TrEMBL
Match: A0A0A0KG89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G408820 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 2.9e-104
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1


Query: 1   MNFLELQTAVVVMTPIESTFSLDVNSNLGNIKVMINLFLVKPCFPVDLLIMMMRISSEKV 60
           MNFLELQTAVVVMTPIESTFSLDVNSNLGNIKVMINLFLVKPCFPVDLLIMMMRISSEKV
Sbjct: 1   MNFLELQTAVVVMTPIESTFSLDVNSNLGNIKVMINLFLVKPCFPVDLLIMMMRISSEKV 60

Query: 61  SLFKYLSCVELGQYQEQVVVVGLGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVT 120
           SLFKYLSCVELGQYQEQVVVVGLGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVT
Sbjct: 61  SLFKYLSCVELGQYQEQVVVVGLGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVT 120

Query: 121 AEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKH 180
           AEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKH
Sbjct: 121 AEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKH 180

Query: 181 GEKSFTSGISPLVTPLLTKH 201
           GEKSFTSGISPLVTPLLTKH
Sbjct: 181 GEKSFTSGISPLVTPLLTKH 200

[Close]

BLAST of Csa6G408820.1 vs. TrEMBL
Match: B9T4A2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0176310 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.9e-24
Identity = 69/118 (58.47%), Postives = 81/118 (68.64%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S      + I GLL VKSLLTV AE ETPV AVSIRRI RVPS++
Sbjct: 250 IGKILARGHSRVPVYSGC---PKNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPSNM 309

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           PLYDILN FQKG++HM  VVKV  K+KN+  +S+GEK  E  F +G S L  PLLTKH
Sbjct: 310 PLYDILNEFQKGSSHMAAVVKVHAKSKNAQPTSDGEKFNEIKFANGDSQLNAPLLTKH 364

[Close]

BLAST of Csa6G408820.1 vs. TrEMBL
Match: B9T4A2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0176310 PE=4 SV=1)

HSP 1 Score: 35.0 bits (79), Expect = 1.2e+02
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL 29
           +TA   MTPIESTFSLDVNS L
Sbjct: 224 KTAEEAMTPIESTFSLDVNSKL 245

HSP 2 Score: 119.4 bits (298), Expect = 5.0e-24
Identity = 63/96 (65.62%), Postives = 72/96 (75.00%), Query Frame = 1


Query: 105 QRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKV 164
           + I GLL VKSLLTV AE ETPV AVSIRRI RVP+ +PLYDILN FQKG++HM  VVKV
Sbjct: 271 KNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPAHMPLYDILNEFQKGSSHMAAVVKV 330

Query: 165 KEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           KEKTK+     +GEK  E   T+G S L TPLLTK+
Sbjct: 331 KEKTKDPEFFDDGEKFDEHRVTNGNSQLTTPLLTKY 366

[Close]

BLAST of Csa6G408820.1 vs. TrEMBL
Match: A0A061DQY0_THECC (CBS domain-containing protein with a domain of Uncharacterized protein function isoform 1 OS=Theobroma cacao GN=TCM_004436 PE=4 SV=1)

HSP 1 Score: 36.2 bits (82), Expect = 5.6e+01
Identity = 26/60 (43.33%), Postives = 28/60 (46.67%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL--------------------GNIKVMINLFLVKPCFPV 47
           +TA   MTPIESTFSLDVNS L                    GN K +I L LVK    V
Sbjct: 226 KTAEEAMTPIESTFSLDVNSKLDWEAVGKILARGHSRIPVYAGNPKNIIGLLLVKSLLTV 285

HSP 2 Score: 117.5 bits (293), Expect = 1.9e-23
Identity = 67/118 (56.78%), Postives = 82/118 (69.49%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S +    + I GLL VKSLLTV AE ETPV AVSIRR+ RVP+D+
Sbjct: 256 IGKILARGHSRVPVFSGN---PKNIIGLLLVKSLLTVRAETETPVSAVSIRRMPRVPADM 315

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           PLYDILN FQKG++HM  VVK+K K+K    + +GEK  E +FT+  S L TPLLTKH
Sbjct: 316 PLYDILNEFQKGSSHMAAVVKIKGKSKIPQPALDGEKCEEDTFTNAKSQLTTPLLTKH 370

[Close]

BLAST of Csa6G408820.1 vs. TrEMBL
Match: W9QKK0_9ROSA (Putative DUF21 domain-containing protein OS=Morus notabilis GN=L484_025039 PE=4 SV=1)

HSP 1 Score: 34.3 bits (77), Expect = 2.1e+02
Identity = 25/60 (41.67%), Postives = 28/60 (46.67%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL--------------------GNIKVMINLFLVKPCFPV 47
           +TA   MTPIESTFSLDV+S L                    GN K +I L LVK    V
Sbjct: 230 KTAEEAMTPIESTFSLDVSSKLDWEAIGKILARGHSRVPVFSGNPKNIIGLLLVKSLLTV 289

HSP 2 Score: 115.5 bits (288), Expect = 7.3e-23
Identity = 70/117 (59.83%), Postives = 78/117 (66.67%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S +    + I GLL VKSLLTV  E ETPV AVSIRRI RVPSD+
Sbjct: 250 MGKILARGHSRVPVYSGN---PKNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVPSDM 309

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTK 200
           PLYDILN FQKG++HM  VVK K KTK    +S GEKH E   TSG S L TPLL K
Sbjct: 310 PLYDILNEFQKGSSHMAAVVKSKGKTK--IPTSTGEKHEENKATSGDSQLTTPLLVK 361

[Close]

BLAST of Csa6G408820.1 vs. TAIR10
Match: AT1G03270.1 (AT1G03270.1 CBS domain-containing protein with a domain of unknown function (DUF21))

HSP 1 Score: 100.9 bits (250), Expect = 9.4e-22
Identity = 60/98 (61.22%), Postives = 66/98 (67.35%), Query Frame = 1


Query: 105 QRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKV 164
           + I GLL VKSLLTV AE E PV +VSIR+I RVPSD+PLYDILN FQKG++HM  VVKV
Sbjct: 269 KNIIGLLLVKSLLTVRAETEAPVSSVSIRKIPRVPSDMPLYDILNEFQKGSSHMAAVVKV 328

Query: 165 KEKTK--NSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           K+K K  N  L SNGE   E       S L  PLL KH
Sbjct: 329 KDKDKKNNMQLLSNGETPKENMKFYQSSNLTAPLL-KH 365

HSP 2 Score: 35.8 bits (81), Expect = 3.7e-02
Identity = 26/63 (41.27%), Postives = 27/63 (42.86%), Query Frame = 1


Query: 4   LELQTAVVVMTPIESTFSLDVNSN--------------------LGNIKVMINLFLVKPC 47
           L  +TA   MTPIESTFSLDVN+                     LGN K +I L LVK  
Sbjct: 221 LSQKTAEEAMTPIESTFSLDVNTKLDWETIGKILSRGHSRIPVYLGNPKNIIGLLLVKSL 280

[Close]

BLAST of Csa6G408820.1 vs. TAIR10
Match: AT4G14230.1 (AT4G14230.1 CBS domain-containing protein with a domain of unknown function (DUF21))

HSP 1 Score: 95.9 bits (237), Expect = 3.0e-20
Identity = 52/95 (54.74%), Postives = 62/95 (65.26%), Query Frame = 1


Query: 105 QRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKV 164
           + + GLL VKSLLTV  E  T V AV IRRI RVP+++PLYDILN FQKG++HM  VVKV
Sbjct: 270 KNVIGLLLVKSLLTVRPETGTLVSAVGIRRIPRVPANMPLYDILNEFQKGSSHMAAVVKV 329

Query: 165 KEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTK 200
           K K+K    + + E  GE + +S  S L  PLL K
Sbjct: 330 KGKSKGHPSTLHEENSGESNVSSNNSELTAPLLLK 364

HSP 2 Score: 35.0 bits (79), Expect = 6.3e-02
Identity = 17/22 (77.27%), Postives = 16/22 (72.73%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL 29
           +TA   MTPIESTFSLDVNS L
Sbjct: 225 KTAQEAMTPIESTFSLDVNSKL 246

[Close]

BLAST of Csa6G408820.1 vs. TAIR10
Match: AT4G14240.1 (AT4G14240.1 CBS domain-containing protein with a domain of unknown function (DUF21))

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-18
Identity = 60/117 (51.28%), Postives = 72/117 (61.54%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S +    + + GLL VKSLLTV  E ET V AV IRRI RVP+D+
Sbjct: 252 MGKILARGHSRVPVYSGN---PKNVIGLLLVKSLLTVRPETETLVSAVCIRRIPRVPADM 311

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTK 200
           PLYDILN FQKG++HM  VVKVK K+K    S+  E+H ++   S  S L  PLL K
Sbjct: 312 PLYDILNEFQKGSSHMAAVVKVKGKSKVPP-STLLEEHTDE---SNDSDLTAPLLLK 361

HSP 2 Score: 36.2 bits (82), Expect = 2.8e-02
Identity = 26/60 (43.33%), Postives = 26/60 (43.33%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL--------------------GNIKVMINLFLVKPCFPV 47
           +TA   MTPIESTFSLDVNS L                    GN K +I L LVK    V
Sbjct: 226 KTAQEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPKNVIGLLLVKSLLTV 285

[Close]

BLAST of Csa6G408820.1 vs. TAIR10
Match: AT4G33700.1 (AT4G33700.1 CBS domain-containing protein with a domain of unknown function (DUF21))

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12
Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 1


Query: 107 IFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKE 166
           I GL+ VK+LLT+  + E PV  V+IRRI RVP  +PLYDILN FQKG +HM VVV+  +
Sbjct: 251 IIGLVLVKNLLTINPDEEIPVKNVTIRRIPRVPEILPLYDILNEFQKGLSHMAVVVRQCD 310

Query: 167 K 168
           K
Sbjct: 311 K 311

[Close]

BLAST of Csa6G408820.1 vs. TAIR10
Match: AT2G14520.1 (AT2G14520.1 CBS domain-containing protein with a domain of unknown function (DUF21))

HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12
Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 1


Query: 107 IFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKE 166
           I GL+ VK+LLT+  + E  V  V+IRRI RVP  +PLYDILN FQKG++HM VVV+  +
Sbjct: 251 IIGLVLVKNLLTINPDEEIQVKNVTIRRIPRVPETLPLYDILNEFQKGHSHMAVVVRQCD 310

Query: 167 K 168
           K
Sbjct: 311 K 311

[Close]

BLAST of Csa6G408820.1 vs. NCBI nr
Match: gi|700192670|gb|KGN47874.1| (hypothetical protein Csa_6G408820 [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 4.1e-104
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1


Query: 1   MNFLELQTAVVVMTPIESTFSLDVNSNLGNIKVMINLFLVKPCFPVDLLIMMMRISSEKV 60
           MNFLELQTAVVVMTPIESTFSLDVNSNLGNIKVMINLFLVKPCFPVDLLIMMMRISSEKV
Sbjct: 1   MNFLELQTAVVVMTPIESTFSLDVNSNLGNIKVMINLFLVKPCFPVDLLIMMMRISSEKV 60

Query: 61  SLFKYLSCVELGQYQEQVVVVGLGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVT 120
           SLFKYLSCVELGQYQEQVVVVGLGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVT
Sbjct: 61  SLFKYLSCVELGQYQEQVVVVGLGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVT 120

Query: 121 AEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKH 180
           AEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKH
Sbjct: 121 AEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKH 180

Query: 181 GEKSFTSGISPLVTPLLTKH 201
           GEKSFTSGISPLVTPLLTKH
Sbjct: 181 GEKSFTSGISPLVTPLLTKH 200

[Close]

BLAST of Csa6G408820.1 vs. NCBI nr
Match: gi|223527135|gb|EEF29310.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 119.8 bits (299), Expect = 5.5e-24
Identity = 69/118 (58.47%), Postives = 81/118 (68.64%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S      + I GLL VKSLLTV AE ETPV AVSIRRI RVPS++
Sbjct: 250 IGKILARGHSRVPVYSGC---PKNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPSNM 309

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           PLYDILN FQKG++HM  VVKV  K+KN+  +S+GEK  E  F +G S L  PLLTKH
Sbjct: 310 PLYDILNEFQKGSSHMAAVVKVHAKSKNAQPTSDGEKFNEIKFANGDSQLNAPLLTKH 364

[Close]

BLAST of Csa6G408820.1 vs. NCBI nr
Match: gi|223527135|gb|EEF29310.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 35.0 bits (79), Expect = 1.8e+02
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL 29
           +TA   MTPIESTFSLDVNS L
Sbjct: 224 KTAEEAMTPIESTFSLDVNSKL 245

HSP 2 Score: 119.8 bits (299), Expect = 5.5e-24
Identity = 69/118 (58.47%), Postives = 81/118 (68.64%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S      + I GLL VKSLLTV AE ETPV AVSIRRI RVPS++
Sbjct: 250 IGKILARGHSRVPVYSGC---PKNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPSNM 309

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           PLYDILN FQKG++HM  VVKV  K+KN+  +S+GEK  E  F +G S L  PLLTKH
Sbjct: 310 PLYDILNEFQKGSSHMAAVVKVHAKSKNAQPTSDGEKFNEIKFANGDSQLNAPLLTKH 364

[Close]

BLAST of Csa6G408820.1 vs. NCBI nr
Match: gi|1000939687|ref|XP_015583232.1| (PREDICTED: uncharacterized protein LOC8266776 [Ricinus communis])

HSP 1 Score: 35.0 bits (79), Expect = 1.8e+02
Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL 29
           +TA   MTPIESTFSLDVNS L
Sbjct: 224 KTAEEAMTPIESTFSLDVNSKL 245

HSP 2 Score: 119.4 bits (298), Expect = 7.2e-24
Identity = 63/96 (65.62%), Postives = 72/96 (75.00%), Query Frame = 1


Query: 105 QRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDIPLYDILNVFQKGNNHMVVVVKV 164
           + I GLL VKSLLTV AE ETPV AVSIRRI RVP+ +PLYDILN FQKG++HM  VVKV
Sbjct: 271 KNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPAHMPLYDILNEFQKGSSHMAAVVKV 330

Query: 165 KEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           KEKTK+     +GEK  E   T+G S L TPLLTK+
Sbjct: 331 KEKTKDPEFFDDGEKFDEHRVTNGNSQLTTPLLTKY 366

[Close]

BLAST of Csa6G408820.1 vs. NCBI nr
Match: gi|590717685|ref|XP_007050665.1| (CBS domain-containing protein with a domain of Uncharacterized protein function isoform 1 [Theobroma cacao])

HSP 1 Score: 36.2 bits (82), Expect = 8.0e+01
Identity = 26/60 (43.33%), Postives = 28/60 (46.67%), Query Frame = 1


Query: 7   QTAVVVMTPIESTFSLDVNSNL--------------------GNIKVMINLFLVKPCFPV 47
           +TA   MTPIESTFSLDVNS L                    GN K +I L LVK    V
Sbjct: 226 KTAEEAMTPIESTFSLDVNSKLDWEAVGKILARGHSRIPVYAGNPKNIIGLLLVKSLLTV 285

HSP 2 Score: 117.5 bits (293), Expect = 2.7e-23
Identity = 67/118 (56.78%), Postives = 82/118 (69.49%), Query Frame = 1


Query: 83  LGKPLKKSLHEVIVVSQSIMRTQRIFGLLQVKSLLTVTAEAETPVGAVSIRRIHRVPSDI 142
           +GK L +    V V S +    + I GLL VKSLLTV AE ETPV AVSIRR+ RVP+D+
Sbjct: 256 IGKILARGHSRVPVFSGN---PKNIIGLLLVKSLLTVRAETETPVSAVSIRRMPRVPADM 315

Query: 143 PLYDILNVFQKGNNHMVVVVKVKEKTKNSALSSNGEKHGEKSFTSGISPLVTPLLTKH 201
           PLYDILN FQKG++HM  VVK+K K+K    + +GEK  E +FT+  S L TPLLTKH
Sbjct: 316 PLYDILNEFQKGSSHMAAVVKIKGKSKIPQPALDGEKCEEDTFTNAKSQLTTPLLTKH 370

The following BLAST results are available for this feature:

BLAST of Csa6G408820.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1327_ARATH	1.7e-20	61.22	Putative DUF21 domain-containing protein At1g03270 OS=Arabidopsis thaliana GN=CB...	[more]
Y4423_ARATH	5.4e-19	54.74	DUF21 domain-containing protein At4g14230 OS=Arabidopsis thaliana GN=CBSDUF2 PE=...	[more]
Y4424_ARATH	2.3e-17	51.28	DUF21 domain-containing protein At4g14240 OS=Arabidopsis thaliana GN=CBSDUF1 PE=...	[more]
Y4370_ARATH	2.4e-11	59.02	DUF21 domain-containing protein At4g33700 OS=Arabidopsis thaliana GN=CBSDUF6 PE=...	[more]
Y2452_ARATH	4.1e-11	57.38	DUF21 domain-containing protein At2g14520 OS=Arabidopsis thaliana GN=CBSDUF3 PE=...	[more]

BLAST of Csa6G408820.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG89_CUCSA	2.9e-104	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G408820 PE=4 SV=1	[more]
B9T4A2_RICCO	3.9e-24	58.47	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0176310 PE=4 SV=1	[more]
B9T4A2_RICCO	1.2e+02	77.27	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0176310 PE=4 SV=1	[more]
A0A061DQY0_THECC	5.6e+01	43.33	CBS domain-containing protein with a domain of Uncharacterized protein function ...	[more]
W9QKK0_9ROSA	2.1e+02	41.67	Putative DUF21 domain-containing protein OS=Morus notabilis GN=L484_025039 PE=4 ...	[more]

BLAST of Csa6G408820.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G03270.1	9.4e-22	61.22	CBS domain-containing protein with a domain of unknown function (DUF...	[more]
AT4G14230.1	3.0e-20	54.74	CBS domain-containing protein with a domain of unknown function (DUF...	[more]
AT4G14240.1	1.3e-18	51.28	CBS domain-containing protein with a domain of unknown function (DUF...	[more]
AT4G33700.1	1.4e-12	59.02	CBS domain-containing protein with a domain of unknown function (DUF...	[more]
AT2G14520.1	2.3e-12	57.38	CBS domain-containing protein with a domain of unknown function (DUF...	[more]

BLAST of Csa6G408820.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700192670\|gb\|KGN47874.1\|	4.1e-104	100.00	hypothetical protein Csa_6G408820 [Cucumis sativus]	[more]
gi\|223527135\|gb\|EEF29310.1\|	5.5e-24	58.47	conserved hypothetical protein [Ricinus communis]	[more]
gi\|223527135\|gb\|EEF29310.1\|	1.8e+02	77.27	conserved hypothetical protein [Ricinus communis]	[more]
gi\|1000939687\|ref\|XP_015583232.1\|	1.8e+02	77.27	PREDICTED: uncharacterized protein LOC8266776 [Ricinus communis]	[more]
gi\|590717685\|ref\|XP_007050665.1\|	8.0e+01	43.33	CBS domain-containing protein with a domain of Uncharacterized protein function ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G408820	Csa6G408820	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa6G408820.1	Csa6G408820.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G408820.1.cds5	Csa6G408820.1.cds5	CDS
Csa6G408820.1.cds4	Csa6G408820.1.cds4	CDS
Csa6G408820.1.cds3	Csa6G408820.1.cds3	CDS
Csa6G408820.1.cds2	Csa6G408820.1.cds2	CDS
Csa6G408820.1.cds1	Csa6G408820.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G408820.1.utr5p1	Csa6G408820.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.580.10		coord: 101..166 score: 6.
None	No IPR available	PANTHER	PTHR12064	ANCIENT CONSERVED DOMAIN PROTEIN-RELATED	coord: 101..167 score: 1.7E-32coord: 4..48 score: 1.7
None	No IPR available	PANTHER	PTHR12064:SF33	SUBFAMILY NOT NAMED	coord: 101..167 score: 1.7E-32coord: 4..48 score: 1.7
None	No IPR available	unknown	SSF54631	CBS-domain pair	coord: 76..163 score: 5.