Csa6G367170 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGGAATTGTAAGTGCGGTGTCCCATAGGGACAGATGTTCAATACTACGGGATTTCACAAGGCCGCCCTCATGGCTTCCAAACCCAAACCCCAGTTACTCCACACAAGTAATTTCTCTCTCTGTGAATTAGGGTTTATAAAATTGAAATTTTCAATTCGATTTTAGTTTTATTCTTCTGGGTTTTTGTCACAATTTCAAATTGTGGGCAGTTGCAGAGACAGCAGTGCAGAGCTCAGTGAAAAGGGCGAGGATATTATCCACCCAATCCTCCATGAAAGACGCCTTCGCTAAATATGCTGAATACCTCAATAACCTTGTAAGTTCATCATTTTCTTTATAGTTCTTGTGTAAGGATGCGCCAATGGATGCGCCAATGAACCGTATACTATCTTGGTGTTACTTCATTTCTTTTTAGCTCCGACGATTTGGGGATTGATTTGAGAATTTAGTGTCTGTTGTTGTTGTTATCGTTGTGGGTTTCTTTAGTTTGTTTCCGTTGTGAGATTACTAGCTTGTTTGGCTTCAATTGCTGCCATTGAAATGCAATGTATATGGTTAAGTTGAGCCCATTAGTTGGCTATTCATTATCAAGAGCTCTTCTGGATGATTAGTTATAGGTTTATGGGTAGAATAGTTCGCTATAATGCTTGAGTTTGCTTCAATTTGAAACCCTTTTTCCCTACCTTTTTGGTTGGTTAAATATGCAGAATGATAAGCGAGAAAGAGTGGTGAAAGCAAGCCGTGATATTACAATGAACAGCAAAAAGGTCATTTTTCAAGTACACAGGTAGGAATTGGGATCTTGCCACTCAGTTAATATCTACGTGTTCTTAGTACTTTATTTTTCACTTTGTTGTGTATGTTATTGATTTGGTTTTTTCTGTTTTCGACTTTTGGCAGTCTTGAACTGTTGAGCACATCAATCTATTTAGTCTTTCACTTGTTTCCATTTTGGATTTTCATGGTCTAGTTGTTGATAAGAACTCATTATGAATACAATTATATGTACGTAGACTGTGGCTTAGTAGTGTGATTATTAAAACAGAATCAGTAAACAGAACAAAGAGGAAGTTCTGGAAAAGGCGGAGAAGGACTTGGGGCATGTGGCAACTTGGCATATATCTCGACTTGTAAAAGAACTACAGGGAACTGATTTCTGGAAGCTAAGGCGAGCATACTCACCAGGGGTAACCTTTCTTTCTTTTACCTTTTTAGGCCTGAAATTAAATGATAAGCCGATTTGCTCAGCTTTGGCTTCTGCAGGTGCAAGAGTATGTTGAAGCTGCAACGTTATGTAAATTCTGCAAAACAGGAACCCTTCTGAGCCTTGATGAGATAAATGCTGGATTGTTACCCCTCTCTGATCCTTCGCTTGAGCCTTTACAAATTAGCAATCTTGACTACCTCTTGGGGGTTAGTATACAAGTTTTGTTTCTTATCATGGCATTATTTTGTTCAAGATGAATCGGACCAAAATACATTTTGTACTGGAGACTGTACCATGCTCTGTGACATGTACTTATCAGTCAGTTAAGAATCTATAAAATCCATCTCATTACTACTACTATTGAAACAGATGCAAGTGAGTTGGCGAATGGTTGTGTTAGTATATGTTAACTGTTTTAGAATAATAGAAGACTGATGTTCCATACAGCTTGCAGATTTGACGGGAGAATTGATGCGGCTGGCAATTGGTCGAATATCAGACGGTGAACTTGAGTATGCTGAGAAGATATGCCGATTTGTTCGTGACATTTACCGTGAGCTCACTCTTTTAGTCCCACATATGGATGATACTTCAGATATGAAAATGAAGATGGATACCATGCTTCAAAGTTTGATGAAGATAGAAAATGGTATTTCTCAAAATGTTCATCTTTCTGATATTTTATGCATGACCTACTTCATTTGTGCATTGCAAATCAGAAACCCATTGTTCAGTCATGTTTCTAGTCAGTAGTCATAGAAACCTGTGAAGAACCAGGTGGTACTGTATAAACAAAGAACGCGAAAGTTTTTTCTCATTCACGTAGATATGAGCAGCATATGTGTGTGTGAGTTTTAAAACAGAAACGAGCATCTTTATTAGTATTAATAAAGGAGACTAAAGCTCAAAAGGACTAAAAGAACATATAAGCATAAACTGAGACAAGAGAGAACATAATAAAATTACAGCAAGCTGGACGAGACCCTCTAGAATCCGAACAAAACAAGAACTAAATACAAAGCAAAATGAAAAATCTTTAACAAGGAGCCCATCTCTTGAAGGGCACTGGACTGGAAAACATTAATCCACTAAACACAATACTAAAAGTTTGGGGGAGCGGAAAATAATCTCCATTGGTTTACTGTTACTGAAATATAAACCCAAGACTAGGTAAACTTCTATTCTTAAATTCAGAATGCCATTCATATCTTCCTCTTGCAATTAGTTTTTCTTCTATATCTACTTTTCTTGCGGATAAGCCATAGAGAAAGGATTTGATTTTTTTTTTTAGGGTTTTTACTTTCTGGTACTCTTAATTTAATCAATTTAACTTTTCCAGACTATTCAATGTATAGTTGATGTGGGTTTCAAGAGTGTAATGTTTTATTAGATGCATGATAACGATGCAGATGGATTGAATAACAGAACATATTTGATTAGATGAGTCGTTTTGCTTCAGTTGCCTATTTATATCTTAACTTGTATTTACTTTCGCAGCTTGCTTCAGTGTTCATGTTCGAGGATCAGAATACATGCCACTACTTGGGTCAAACGATCCAGGTTCATTCTTATCAGGGGTTCCCGATATCGAGCTTTAAAGTCATTTTTCTCGTTCCATGCATGCAAACTCGTTGTTATTAGCTAAGATTAACTTTTGCAAAGTCATTTACTTTGCTGTTAAATGTTTTTCCTAGGAAATGAAAACACTTAGAAGGTAAGAATAGAAGACATTCTATCATCCTTGCCTGAAAAGAGATATAAAACTTCAGAAGGAGAAAGCTTTGAACTTGGGAAATTTTGTTAAGTTAGCCCAAATGGGCAAATACATCTTGTATGTTTGGCCATAATGCTAAGATGTGATTTTTGTTTAATGAAATTTCATTGTTAGGCATAGACATTCTTTATATAATAAAGATGGGCCAAAGGTAAGTAGGTTTTGTGGG ATGTTCAATACTACGGGATTTCACAAGGCCGCCCTCATGGCTTCCAAACCCAAACCCCAGTTACTCCACACAATTGCAGAGACAGCAGTGCAGAGCTCAGTGAAAAGGGCGAGGATATTATCCACCCAATCCTCCATGAAAGACGCCTTCGCTAAATATGCTGAATACCTCAATAACCTTAATGATAAGCGAGAAAGAGTGGTGAAAGCAAGCCGTGATATTACAATGAACAGCAAAAAGGTCATTTTTCAAGTACACAGAATCAGTAAACAGAACAAAGAGGAAGTTCTGGAAAAGGCGGAGAAGGACTTGGGGCATGTGGCAACTTGGCATATATCTCGACTTGTAAAAGAACTACAGGGAACTGATTTCTGGAAGCTAAGGCGAGCATACTCACCAGGGGTGCAAGAGTATGTTGAAGCTGCAACGTTATGTAAATTCTGCAAAACAGGAACCCTTCTGAGCCTTGATGAGATAAATGCTGGATTGTTACCCCTCTCTGATCCTTCGCTTGAGCCTTTACAAATTAGCAATCTTGACTACCTCTTGGGGCTTGCAGATTTGACGGGAGAATTGATGCGGCTGGCAATTGGTCGAATATCAGACGGTGAACTTGAGTATGCTGAGAAGATATGCCGATTTGTTCGTGACATTTACCGTGAGCTCACTCTTTTAGTCCCACATATGGATGATACTTCAGATATGAAAATGAAGATGGATACCATGCTTCAAAGTTTGATGAAGATAGAAAATGCTTGCTTCAGTGTTCATGTTCGAGGATCAGAATACATGCCACTACTTGGGTCAAACGATCCAGGTTCATTCTTATCAGGGGTTCCCGATATCGAGCTTTAA ATGTTCAATACTACGGGATTTCACAAGGCCGCCCTCATGGCTTCCAAACCCAAACCCCAGTTACTCCACACAATTGCAGAGACAGCAGTGCAGAGCTCAGTGAAAAGGGCGAGGATATTATCCACCCAATCCTCCATGAAAGACGCCTTCGCTAAATATGCTGAATACCTCAATAACCTTAATGATAAGCGAGAAAGAGTGGTGAAAGCAAGCCGTGATATTACAATGAACAGCAAAAAGGTCATTTTTCAAGTACACAGAATCAGTAAACAGAACAAAGAGGAAGTTCTGGAAAAGGCGGAGAAGGACTTGGGGCATGTGGCAACTTGGCATATATCTCGACTTGTAAAAGAACTACAGGGAACTGATTTCTGGAAGCTAAGGCGAGCATACTCACCAGGGGTGCAAGAGTATGTTGAAGCTGCAACGTTATGTAAATTCTGCAAAACAGGAACCCTTCTGAGCCTTGATGAGATAAATGCTGGATTGTTACCCCTCTCTGATCCTTCGCTTGAGCCTTTACAAATTAGCAATCTTGACTACCTCTTGGGGCTTGCAGATTTGACGGGAGAATTGATGCGGCTGGCAATTGGTCGAATATCAGACGGTGAACTTGAGTATGCTGAGAAGATATGCCGATTTGTTCGTGACATTTACCGTGAGCTCACTCTTTTAGTCCCACATATGGATGATACTTCAGATATGAAAATGAAGATGGATACCATGCTTCAAAGTTTGATGAAGATAGAAAATGCTTGCTTCAGTGTTCATGTTCGAGGATCAGAATACATGCCACTACTTGGGTCAAACGATCCAGGTTCATTCTTATCAGGGGTTCCCGATATCGAGCTTTAA MFNTTGFHKAALMASKPKPQLLHTIAETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNLNDKRERVVKASRDITMNSKKVIFQVHRISKQNKEEVLEKAEKDLGHVATWHISRLVKELQGTDFWKLRRAYSPGVQEYVEAATLCKFCKTGTLLSLDEINAGLLPLSDPSLEPLQISNLDYLLGLADLTGELMRLAIGRISDGELEYAEKICRFVRDIYRELTLLVPHMDDTSDMKMKMDTMLQSLMKIENACFSVHVRGSEYMPLLGSNDPGSFLSGVPDIEL*
BLAST of Csa6G367170 vs. Swiss-Prot
Match: TSNAX_MACFA (Translin-associated protein X OS=Macaca fascicularis GN=TSNAX PE=2 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 9.9e-35 Identity = 91/246 (36.99%), Postives = 145/246 (58.94%), Query Frame = 1
BLAST of Csa6G367170 vs. Swiss-Prot
Match: TSNAX_HUMAN (Translin-associated protein X OS=Homo sapiens GN=TSNAX PE=1 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.9e-34 Identity = 90/246 (36.59%), Postives = 145/246 (58.94%), Query Frame = 1
BLAST of Csa6G367170 vs. Swiss-Prot
Match: TSNAX_PONAB (Translin-associated protein X OS=Pongo abelii GN=TSNAX PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.9e-34 Identity = 90/246 (36.59%), Postives = 145/246 (58.94%), Query Frame = 1
BLAST of Csa6G367170 vs. Swiss-Prot
Match: TSNAX_RAT (Translin-associated protein X OS=Rattus norvegicus GN=Tsnax PE=1 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 3.8e-34 Identity = 89/240 (37.08%), Postives = 141/240 (58.75%), Query Frame = 1
BLAST of Csa6G367170 vs. Swiss-Prot
Match: TSNAX_MOUSE (Translin-associated protein X OS=Mus musculus GN=Tsnax PE=1 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 8.4e-34 Identity = 90/254 (35.43%), Postives = 145/254 (57.09%), Query Frame = 1
BLAST of Csa6G367170 vs. TrEMBL
Match: A0A0A0KIS4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367170 PE=4 SV=1) HSP 1 Score: 561.2 bits (1445), Expect = 7.1e-157 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1
BLAST of Csa6G367170 vs. TrEMBL
Match: G7LG96_MEDTR (Translin-associated factor X OS=Medicago truncatula GN=MTR_8g066180 PE=4 SV=2) HSP 1 Score: 433.7 bits (1114), Expect = 1.7e-118 Identity = 219/289 (75.78%), Postives = 243/289 (84.08%), Query Frame = 1
BLAST of Csa6G367170 vs. TrEMBL
Match: A0A067JJ71_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05804 PE=4 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 8.5e-118 Identity = 216/270 (80.00%), Postives = 241/270 (89.26%), Query Frame = 1
BLAST of Csa6G367170 vs. TrEMBL
Match: A0A0S3R3K9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G300500 PE=4 SV=1) HSP 1 Score: 420.6 bits (1080), Expect = 1.5e-114 Identity = 217/281 (77.22%), Postives = 238/281 (84.70%), Query Frame = 1
BLAST of Csa6G367170 vs. TrEMBL
Match: D7TA79_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g00580 PE=4 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 9.7e-114 Identity = 211/268 (78.73%), Postives = 232/268 (86.57%), Query Frame = 1
BLAST of Csa6G367170 vs. TAIR10
Match: AT2G03780.1 (AT2G03780.1 Translin family protein) HSP 1 Score: 404.1 bits (1037), Expect = 7.3e-113 Identity = 204/283 (72.08%), Postives = 237/283 (83.75%), Query Frame = 1
BLAST of Csa6G367170 vs. NCBI nr
Match: gi|449452825|ref|XP_004144159.1| (PREDICTED: translin-associated protein X [Cucumis sativus]) HSP 1 Score: 561.2 bits (1445), Expect = 1.0e-156 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1
BLAST of Csa6G367170 vs. NCBI nr
Match: gi|659089288|ref|XP_008445427.1| (PREDICTED: translin-associated protein X isoform X2 [Cucumis melo]) HSP 1 Score: 542.0 bits (1395), Expect = 6.4e-151 Identity = 276/284 (97.18%), Postives = 278/284 (97.89%), Query Frame = 1
BLAST of Csa6G367170 vs. NCBI nr
Match: gi|659089286|ref|XP_008445426.1| (PREDICTED: translin-associated protein X isoform X1 [Cucumis melo]) HSP 1 Score: 533.9 bits (1374), Expect = 1.7e-148 Identity = 275/294 (93.54%), Postives = 278/294 (94.56%), Query Frame = 1
BLAST of Csa6G367170 vs. NCBI nr
Match: gi|1000981495|ref|XP_015582855.1| (PREDICTED: translin-associated protein X isoform X2 [Ricinus communis]) HSP 1 Score: 449.1 bits (1154), Expect = 5.6e-123 Identity = 227/279 (81.36%), Postives = 250/279 (89.61%), Query Frame = 1
BLAST of Csa6G367170 vs. NCBI nr
Match: gi|1000981493|ref|XP_002512028.2| (PREDICTED: translin-associated protein X isoform X1 [Ricinus communis]) HSP 1 Score: 445.3 bits (1144), Expect = 8.2e-122 Identity = 227/282 (80.50%), Postives = 250/282 (88.65%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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