CU108566 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU108566
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Translin family protein
Location	Chr6 : 16862709 .. 16863873 (-)
Sequence length	421

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGATAGGGACAGATGTTCAATACTACGGGATTTCACAAGGCCGCCCTCATGGCTTCCAAACCCAAACCCCAGTTACTCCACACAATTGCAGAGACAGCAGTGCAGAGCTCAGTGAAAAGGGCGAGGATATTATCCACCCAATCCTCCATGAAAGACGCCTTCGCTAAATATGCTGAATACCTCAATAACCTTAATGATAAGCGAGAAAGAGTGGTGAAAGCAAGCCGTGATATTACAATGAACAGCAAAAAGGTCATTTTTCAAGTACGCAGAGTCAGTAAACAGAACAAAGAGGAAGTTCTGGAAAAGGCGGAGAAGGACTTGGGGCATGTGGCAACTTGGCATATATCTCGACTTGTAAAAGAACTACAGGGAACTGATTTCTGGAAGCTAAGGCGAGCATACTCACCAGGG

Library


Library category	ESTs
fruit (8DPP) library	3
hermaphrodite flower library	1

Homology

[Close]

BLAST of CU108566 vs. Swiss-Prot
Match: TSNAX_MOUSE (Translin-associated protein X OS=Mus musculus GN=Tsnax PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-07
Identity = 37/109 (33.94%), Postives = 58/109 (53.21%), Query Frame = 2


Query: 98  ETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNLNDKRERVVKASRDITMNSKKVIFQVR 157
           +T   +  +  +  S  S +  AF  + + L+  +DK ER+VK SRDIT+ SK+ IF + 
Sbjct: 16  DTFPHNQRREGKDASLSSPVMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLH 75

Query: 158 RV-SKQNKEEVLEKAEKDLGHVATWHISRLVKELQGTDFWKLRRAYSPG 217
           R+ S  + EE+L ++E  L  V    I ++ +EL G D  +  RA + G
Sbjct: 76  RITSAPDMEEILTESESKLDGVRQ-KILQVAQELSGEDMHQFHRAVTTG 123

Query: 218  277
           
Sbjct: 136  123

Query: 278  337
           
Sbjct: 196  123

Query: 338  397
           
Sbjct: 256  123

Query: 398  422
           
Sbjct: 316  123

[Close]

BLAST of CU108566 vs. Swiss-Prot
Match: TSNAX_RAT (Translin-associated protein X OS=Rattus norvegicus GN=Tsnax PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-07
Identity = 35/95 (36.84%), Postives = 54/95 (56.84%), Query Frame = 2


Query: 140 STQSSMKDAFAKYAEYLNNLNDKRERVVKASRDITMNSKKVIFQVRRV-SKQNKEEVLEK 199
           S+ S +  AF  + + L+  +DK ER+VK SRDIT+ SK+ IF + R+ S  + EE+L +
Sbjct: 30  SSSSPVMLAFKSFQQELDTRHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEEILTE 89

Query: 200 AEKDLGHVATWHISRLVKELQGTDFWKLRRAYSPG 259
           +E  L  V    + ++ +EL G D  +  RA + G
Sbjct: 90  SESKLDGVRQ-KMLQVAQELSGEDMHQFHRAVTTG 123

Query: 260  319
           
Sbjct: 150  123

Query: 320  379
           
Sbjct: 210  123

Query: 380  422
           
Sbjct: 270  123

[Close]

BLAST of CU108566 vs. Swiss-Prot
Match: TSNAX_HUMAN (Translin-associated protein X OS=Homo sapiens GN=TSNAX PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.3e-07
Identity = 34/101 (33.66%), Postives = 57/101 (56.44%), Query Frame = 2


Query: 122 KRARILSTQSSMKDAFAKYAEYLNNLNDKRERVVKASRDITMNSKKVIFQVRRV-SKQNK 181
           +  + +++ S +  AF  + + L+  +DK ER+VK SRDIT+ SK+ IF + R+ S  + 
Sbjct: 24  REGKDVNSSSPVMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDM 83

Query: 182 EEVLEKAEKDLGHVATWHISRLVKELQGTDFWKLRRAYSPG 241
           E++L ++E  L  V    I ++ +EL G D  +  RA + G
Sbjct: 84  EDILTESEIKLDGVRQ-KIFQVAQELSGEDMHQFHRAITTG 123

Query: 242  301
           
Sbjct: 144  123

Query: 302  361
           
Sbjct: 204  123

Query: 362  421
           
Sbjct: 264  123

[Close]

BLAST of CU108566 vs. Swiss-Prot
Match: TSNAX_MACFA (Translin-associated protein X OS=Macaca fascicularis GN=TSNAX PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.3e-07
Identity = 34/101 (33.66%), Postives = 57/101 (56.44%), Query Frame = 2


Query: 122 KRARILSTQSSMKDAFAKYAEYLNNLNDKRERVVKASRDITMNSKKVIFQVRRV-SKQNK 181
           +  + +++ S +  AF  + + L+  +DK ER+VK SRDIT+ SK+ IF + R+ S  + 
Sbjct: 24  REGKDVNSSSPVMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDM 83

Query: 182 EEVLEKAEKDLGHVATWHISRLVKELQGTDFWKLRRAYSPG 241
           E++L ++E  L  V    I ++ +EL G D  +  RA + G
Sbjct: 84  EDILTESEIKLDGVRQ-KIFQVAQELSGEDMHQFHRAITTG 123

Query: 242  301
           
Sbjct: 144  123

Query: 302  361
           
Sbjct: 204  123

Query: 362  421
           
Sbjct: 264  123

[Close]

BLAST of CU108566 vs. Swiss-Prot
Match: TSNAX_PONAB (Translin-associated protein X OS=Pongo abelii GN=TSNAX PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.3e-07
Identity = 34/101 (33.66%), Postives = 57/101 (56.44%), Query Frame = 2


Query: 122 KRARILSTQSSMKDAFAKYAEYLNNLNDKRERVVKASRDITMNSKKVIFQVRRV-SKQNK 181
           +  + +++ S +  AF  + + L+  +DK ER+VK SRDIT+ SK+ IF + R+ S  + 
Sbjct: 24  REGKDVNSSSPVMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDM 83

Query: 182 EEVLEKAEKDLGHVATWHISRLVKELQGTDFWKLRRAYSPG 241
           E++L ++E  L  V    I ++ +EL G D  +  RA + G
Sbjct: 84  EDILTESEIKLDGVRQ-KIFQVAQELSGEDMHQFHRAITTG 123

Query: 242  301
           
Sbjct: 144  123

Query: 302  361
           
Sbjct: 204  123

Query: 362  421
           
Sbjct: 264  123

[Close]

BLAST of CU108566 vs. TrEMBL
Match: A0A0A0KIS4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367170 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 2.6e-67
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 2


Query: 20  MFNTTGFHKAALMASKPKPQLLHTIAETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNL 79
           MFNTTGFHKAALMASKPKPQLLHTIAETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNL
Sbjct: 1   MFNTTGFHKAALMASKPKPQLLHTIAETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNL 60

Query: 80  NDKRERVVKASRDITMNSKKVIFQVRRVSKQNKEEVLEKAEKDLGHVATWHISRLVKELQ 139
           NDKRERVVKASRDITMNSKKVIFQV R+SKQNKEEVLEKAEKDLGHVATWHISRLVKELQ
Sbjct: 61  NDKRERVVKASRDITMNSKKVIFQVHRISKQNKEEVLEKAEKDLGHVATWHISRLVKELQ 120

Query: 140 GTDFWKLRRAYSPG 199
           GTDFWKLRRAYSPG
Sbjct: 121 GTDFWKLRRAYSPG 134

Query: 200  259
           
Sbjct: 181  134

Query: 260  319
           
Sbjct: 241  134

Query: 320  379
           
Sbjct: 301  134

Query: 380  422
           
Sbjct: 361  134

[Close]

BLAST of CU108566 vs. TrEMBL
Match: B9RE89_RICCO (Translin associated factor X, putative OS=Ricinus communis GN=RCOM_1619600 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.8e-45
Identity = 99/132 (75.00%), Postives = 108/132 (81.82%), Query Frame = 2


Query: 35  GFHKAALMASKPKPQLLH---TIAETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNLND 94
           G H   LMASK KP   H     A TA+QSS KRAR +ST+SS KDAF+KYA+YLNNLN+
Sbjct: 7   GLHWIVLMASKSKPHRPHHQEVAAGTALQSSTKRARTMSTESSFKDAFSKYADYLNNLNE 66

Query: 95  KRERVVKASRDITMNSKKVIFQVRRVSKQNKEEVLEKAEKDLGHVATWHISRLVKELQGT 154
           KRERVVKASRD+TMNSKKVIFQV R+SK NKEEVLEKAEKDL  V   H+SRLVKELQGT
Sbjct: 67  KRERVVKASRDVTMNSKKVIFQVHRLSKYNKEEVLEKAEKDLAAVTDQHMSRLVKELQGT 126

Query: 155 DFWKLRRAYSPG 214
           DFWKLRRAYSPG
Sbjct: 127 DFWKLRRAYSPG 138

Query: 215  274
           
Sbjct: 187  138

Query: 275  334
           
Sbjct: 247  138

Query: 335  394
           
Sbjct: 307  138

Query: 395  422
           
Sbjct: 367  138

[Close]

BLAST of CU108566 vs. TrEMBL
Match: A0A067JJ71_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05804 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 5.2e-44
Identity = 93/122 (76.23%), Postives = 104/122 (85.25%), Query Frame = 2


Query: 56  MASKPKPQLLHTIAETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNLNDKRERVVKASR 115
           MA KPKP  L  +A TA+ SS KRAR +ST+SS KDAF KYAEYLNNLN+KRERVVKASR
Sbjct: 1   MAPKPKPHRLDQVAGTALPSSAKRARTMSTESSFKDAFGKYAEYLNNLNEKRERVVKASR 60

Query: 116 DITMNSKKVIFQVRRVSKQNKEEVLEKAEKDLGHVATWHISRLVKELQGTDFWKLRRAYS 175
           D+TMNSKKVIFQV R+SK N+EEVLEKAEKDL  V   ++SR+VKELQGTDFWKLRRAYS
Sbjct: 61  DVTMNSKKVIFQVHRMSKDNREEVLEKAEKDLAAVTDRYMSRMVKELQGTDFWKLRRAYS 120

Query: 176 PG 235
           PG
Sbjct: 121 PG 122

Query: 236  295
           
Sbjct: 181  122

Query: 296  355
           
Sbjct: 241  122

Query: 356  415
           
Sbjct: 301  122

Query: 416  422
           
Sbjct: 361  122

[Close]

BLAST of CU108566 vs. TrEMBL
Match: V4KNR4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10004726mg PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.5e-43
Identity = 96/133 (72.18%), Postives = 108/133 (81.20%), Query Frame = 2


Query: 29  TTGFHKAA--LMASKPKPQLLHTIAETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNLN 88
           ++ F + A  LMA K K Q LH IAET  +  VK+AR +ST+SSMKDAF+KYA+YLNN N
Sbjct: 5   SSAFQRVAFMLMAPKLKAQRLHQIAETGAEQLVKKARTMSTESSMKDAFSKYADYLNNFN 64

Query: 89  DKRERVVKASRDITMNSKKVIFQVRRVSKQNKEEVLEKAEKDLGHVATWHISRLVKELQG 148
           +KRERVVKASRDITMNSKKVIFQV R+SK NKEEVLEKA KDL  V   H SRL+KELQG
Sbjct: 65  EKRERVVKASRDITMNSKKVIFQVHRLSKDNKEEVLEKAGKDLEAVREQHFSRLMKELQG 124

Query: 149 TDFWKLRRAYSPG 208
           TDFWKLRRAYSPG
Sbjct: 125 TDFWKLRRAYSPG 137

Query: 209  268
           
Sbjct: 185  137

Query: 269  328
           
Sbjct: 245  137

Query: 329  388
           
Sbjct: 305  137

Query: 389  422
           
Sbjct: 365  137

[Close]

BLAST of CU108566 vs. TrEMBL
Match: D7LQL3_ARALL (Translin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484287 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.4e-43
Identity = 94/134 (70.15%), Postives = 110/134 (82.09%), Query Frame = 2


Query: 26  NTTGFHKAA--LMASKPKPQLLHTIAETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNL 85
           +++ F + A  LMA K KPQ LH IAET V+  VK+AR +ST+SSMKDAF+ YA+YLNN 
Sbjct: 5   SSSAFQRVAFMLMAPKLKPQRLHQIAETGVEQLVKKARTMSTESSMKDAFSTYADYLNNF 64

Query: 86  NDKRERVVKASRDITMNSKKVIFQVRRVSKQNKEEVLEKAEKDLGHVATWHISRLVKELQ 145
           N+KRERVVKASRDITMNSKKVIFQV R+SK NKEEVLEKA KDL  V   H ++L++ELQ
Sbjct: 65  NEKRERVVKASRDITMNSKKVIFQVHRLSKDNKEEVLEKAGKDLEAVRDQHFAQLMRELQ 124

Query: 146 GTDFWKLRRAYSPG 205
           GTDFWKLRRAYSPG
Sbjct: 125 GTDFWKLRRAYSPG 138

Query: 206  265
           
Sbjct: 185  138

Query: 266  325
           
Sbjct: 245  138

Query: 326  385
           
Sbjct: 305  138

Query: 386  422
           
Sbjct: 365  138

[Close]

BLAST of CU108566 vs. NCBI nr
Match: gi|449452825|ref|XP_004144159.1| (PREDICTED: translin-associated protein X [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 6.9e-66
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 2


Query: 20  MFNTTGFHKAALMASKPKPQLLHTIAETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNL 79
           MFNTTGFHKAALMASKPKPQLLHTIAETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNL
Sbjct: 1   MFNTTGFHKAALMASKPKPQLLHTIAETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNL 60

Query: 80  NDKRERVVKASRDITMNSKKVIFQVRRVSKQNKEEVLEKAEKDLGHVATWHISRLVKELQ 139
           NDKRERVVKASRDITMNSKKVIFQV R+SKQNKEEVLEKAEKDLGHVATWHISRLVKELQ
Sbjct: 61  NDKRERVVKASRDITMNSKKVIFQVHRISKQNKEEVLEKAEKDLGHVATWHISRLVKELQ 120

Query: 140 GTDFWKLRRAYSPG 199
           GTDFWKLRRAYSPG
Sbjct: 121 GTDFWKLRRAYSPG 134

Query: 200  259
           
Sbjct: 181  134

Query: 260  319
           
Sbjct: 241  134

Query: 320  379
           
Sbjct: 301  134

Query: 380  422
           
Sbjct: 361  134

[Close]

BLAST of CU108566 vs. NCBI nr
Match: gi|659089288|ref|XP_008445427.1| (PREDICTED: translin-associated protein X isoform X2 [Cucumis melo])

HSP 1 Score: 245.0 bits (624), Expect = 7.9e-62
Identity = 127/134 (94.78%), Postives = 129/134 (96.27%), Query Frame = 2


Query: 20  MFNTTGFHKAALMASKPKPQLLHTIAETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNL 79
           MFNTTGFHKAALMASKPKPQLLH IAETAVQSSVKRAR LSTQSSMKDAFAKYAEYLNNL
Sbjct: 1   MFNTTGFHKAALMASKPKPQLLHKIAETAVQSSVKRARTLSTQSSMKDAFAKYAEYLNNL 60

Query: 80  NDKRERVVKASRDITMNSKKVIFQVRRVSKQNKEEVLEKAEKDLGHVATWHISRLVKELQ 139
           NDKRERVVKASRDITMNSKKVIFQV R+SKQNKEEVLEKAEKDLG VAT H+SRLVKELQ
Sbjct: 61  NDKRERVVKASRDITMNSKKVIFQVHRISKQNKEEVLEKAEKDLGDVATRHVSRLVKELQ 120

Query: 140 GTDFWKLRRAYSPG 199
           GTDFWKLRRAYSPG
Sbjct: 121 GTDFWKLRRAYSPG 134

Query: 200  259
           
Sbjct: 181  134

Query: 260  319
           
Sbjct: 241  134

Query: 320  379
           
Sbjct: 301  134

Query: 380  422
           
Sbjct: 361  134

[Close]

BLAST of CU108566 vs. NCBI nr
Match: gi|659089286|ref|XP_008445426.1| (PREDICTED: translin-associated protein X isoform X1 [Cucumis melo])

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-59
Identity = 126/144 (87.50%), Postives = 129/144 (89.58%), Query Frame = 2


Query: 20  MFNTTGFHKAALMASKPKPQLLH----------TIAETAVQSSVKRARILSTQSSMKDAF 79
           MFNTTGFHKAALMASKPKPQLLH           +AETAVQSSVKRAR LSTQSSMKDAF
Sbjct: 1   MFNTTGFHKAALMASKPKPQLLHKSLCHNFKLWAVAETAVQSSVKRARTLSTQSSMKDAF 60

Query: 80  AKYAEYLNNLNDKRERVVKASRDITMNSKKVIFQVRRVSKQNKEEVLEKAEKDLGHVATW 139
           AKYAEYLNNLNDKRERVVKASRDITMNSKKVIFQV R+SKQNKEEVLEKAEKDLG VAT 
Sbjct: 61  AKYAEYLNNLNDKRERVVKASRDITMNSKKVIFQVHRISKQNKEEVLEKAEKDLGDVATR 120

Query: 140 HISRLVKELQGTDFWKLRRAYSPG 199
           H+SRLVKELQGTDFWKLRRAYSPG
Sbjct: 121 HVSRLVKELQGTDFWKLRRAYSPG 144

Query: 200  259
           
Sbjct: 181  144

Query: 260  319
           
Sbjct: 241  144

Query: 320  379
           
Sbjct: 301  144

Query: 380  422
           
Sbjct: 361  144

[Close]

BLAST of CU108566 vs. NCBI nr
Match: gi|1000981495|ref|XP_015582855.1| (PREDICTED: translin-associated protein X isoform X2 [Ricinus communis])

HSP 1 Score: 188.7 bits (478), Expect = 6.8e-45
Identity = 99/129 (76.74%), Postives = 108/129 (83.72%), Query Frame = 2


Query: 35  GFHKAALMASKPKPQLLHTIAETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNLNDKRE 94
           G H   LMASK KP   H  A TA+QSS KRAR +ST+SS KDAF+KYA+YLNNLN+KRE
Sbjct: 7   GLHWIVLMASKSKPHRPHHQAGTALQSSTKRARTMSTESSFKDAFSKYADYLNNLNEKRE 66

Query: 95  RVVKASRDITMNSKKVIFQVRRVSKQNKEEVLEKAEKDLGHVATWHISRLVKELQGTDFW 154
           RVVKASRD+TMNSKKVIFQV R+SK NKEEVLEKAEKDL  V   H+SRLVKELQGTDFW
Sbjct: 67  RVVKASRDVTMNSKKVIFQVHRLSKYNKEEVLEKAEKDLAAVTDQHMSRLVKELQGTDFW 126

Query: 155 KLRRAYSPG 214
           KLRRAYSPG
Sbjct: 127 KLRRAYSPG 135

Query: 215  274
           
Sbjct: 187  135

Query: 275  334
           
Sbjct: 247  135

Query: 335  394
           
Sbjct: 307  135

Query: 395  422
           
Sbjct: 367  135

[Close]

BLAST of CU108566 vs. NCBI nr
Match: gi|223549208|gb|EEF50697.1| (translin associated factor X, putative [Ricinus communis])

HSP 1 Score: 184.9 bits (468), Expect = 9.8e-44
Identity = 99/132 (75.00%), Postives = 108/132 (81.82%), Query Frame = 2


Query: 35  GFHKAALMASKPKPQLLH---TIAETAVQSSVKRARILSTQSSMKDAFAKYAEYLNNLND 94
           G H   LMASK KP   H     A TA+QSS KRAR +ST+SS KDAF+KYA+YLNNLN+
Sbjct: 7   GLHWIVLMASKSKPHRPHHQEVAAGTALQSSTKRARTMSTESSFKDAFSKYADYLNNLNE 66

Query: 95  KRERVVKASRDITMNSKKVIFQVRRVSKQNKEEVLEKAEKDLGHVATWHISRLVKELQGT 154
           KRERVVKASRD+TMNSKKVIFQV R+SK NKEEVLEKAEKDL  V   H+SRLVKELQGT
Sbjct: 67  KRERVVKASRDVTMNSKKVIFQVHRLSKYNKEEVLEKAEKDLAAVTDQHMSRLVKELQGT 126

Query: 155 DFWKLRRAYSPG 214
           DFWKLRRAYSPG
Sbjct: 127 DFWKLRRAYSPG 138

Query: 215  274
           
Sbjct: 187  138

Query: 275  334
           
Sbjct: 247  138

Query: 335  394
           
Sbjct: 307  138

Query: 395  422
           
Sbjct: 367  138

The following BLAST results are available for this feature:

BLAST of CU108566 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TSNAX_MOUSE	1.5e-07	33.94	Translin-associated protein X OS=Mus musculus GN=Tsnax PE=1 SV=1	[more]
TSNAX_RAT	1.5e-07	36.84	Translin-associated protein X OS=Rattus norvegicus GN=Tsnax PE=1 SV=1	[more]
TSNAX_HUMAN	7.3e-07	33.66	Translin-associated protein X OS=Homo sapiens GN=TSNAX PE=1 SV=1	[more]
TSNAX_MACFA	7.3e-07	33.66	Translin-associated protein X OS=Macaca fascicularis GN=TSNAX PE=2 SV=1	[more]
TSNAX_PONAB	7.3e-07	33.66	Translin-associated protein X OS=Pongo abelii GN=TSNAX PE=2 SV=1	[more]

BLAST of CU108566 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIS4_CUCSA	2.6e-67	98.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367170 PE=4 SV=1	[more]
B9RE89_RICCO	2.8e-45	75.00	Translin associated factor X, putative OS=Ricinus communis GN=RCOM_1619600 PE=4 ...	[more]
A0A067JJ71_JATCU	5.2e-44	76.23	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05804 PE=4 SV=1	[more]
V4KNR4_EUTSA	1.5e-43	72.18	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10004726mg PE=4 SV=1	[more]
D7LQL3_ARALL	3.4e-43	70.15	Translin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484287...	[more]

BLAST of CU108566 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452825\|ref\|XP_004144159.1\|	6.9e-66	98.51	PREDICTED: translin-associated protein X [Cucumis sativus]	[more]
gi\|659089288\|ref\|XP_008445427.1\|	7.9e-62	94.78	PREDICTED: translin-associated protein X isoform X2 [Cucumis melo]	[more]
gi\|659089286\|ref\|XP_008445426.1\|	2.2e-59	87.50	PREDICTED: translin-associated protein X isoform X1 [Cucumis melo]	[more]
gi\|1000981495\|ref\|XP_015582855.1\|	6.8e-45	76.74	PREDICTED: translin-associated protein X isoform X2 [Ricinus communis]	[more]
gi\|223549208\|gb\|EEF50697.1\|	9.8e-44	75.00	translin associated factor X, putative [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR002848	Translin_fam
IPR016068	Translin_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0043565	sequence-specific DNA binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G367170	Csa6G367170	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02LGHGY	FKNP3UI02LGHGY	EST
FKNP3UI02MWPXB	FKNP3UI02MWPXB	EST
FKNP3UI02O2EGG	FKNP3UI02O2EGG	EST
H0159861	H0159861	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002848	Translin	PANTHER	PTHR10741	TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X	coord: 37..140 score: 1.8
IPR002848	Translin	PFAM	PF01997	Translin	coord: 68..140 score: 1.3
IPR002848	Translin	unknown	SSF74784	Translin	coord: 51..139 score: 1.83
IPR016068	Translin, N-terminal	GENE3D	G3DSA:1.20.58.190		coord: 47..138 score: 4.2
None	No IPR available	unknown	Coil	Coil	coord: 52..79 scor
None	No IPR available	PANTHER	PTHR10741:SF5	TRANSLIN-ASSOCIATED PROTEIN X	coord: 37..140 score: 1.8