Csa6G041710 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGGATTTTTGAAAACTAGCCCTTCAATTAAACAATCCCCACAGTGGTGAAGTGAACGCTCGAAACTGACTCTTCTGCTGCCCCGCTCTTCCGCCGATCACTAACTTCTCGAATCGTCCTAGGGCTGTCCCAACTACTGCTCTCCCGGTGTTCAAACACGCCGCAGGTTAAATTACAATCAATTTCCATTCCCTATTTTCCTTTTCCATTTGTCTTGCCTCACAATTTTCTCGGTAACGTAGGAAAATGGTATGATAAACGAAATTTGCTCTCAGGTTTTGTATATTTTCGTGTACTGTAAGATATGGGAAGGAGGATTTTGAACGACGCATTAAGATCTATTGTCAATGCTGAGAGGAGGGGAAACTCTATGGTGGAACTCAAACCCATTTCCACTGTCATGGCTTCTTTTCTTAAAGTCATGAAAGATCATGGTAAGACCTGTGTCTCTCTAGCTTTTTGGGTGATGAACTGACATGGTTTTTCACCTTTTCTTACGCCCTATTTATTTGCTTAGAATTTATGCTCCGGTGTTTTACTTCATGCTGTCAAGTGATAGATTCATATTGGCATTTCCTTCGTGTTGAGATCATTCGTGATTACTTTGTAGATTCGTAGATTTGTTGCTGCTGTGAAATGTGAGTGTTAAACCTCTTTTGTGATGTACAATATGCAGAAAATTGAAACAACCTTGGGCTTTACACTCTAGACTAGATTATAACTTCATCCAGCTCCTTATTAATTAGAATGCATCCTGGCATGATTTTACTTCTATGTTTAACATGACAGAGGTTATAATTGAAATGACCTTGCCTATATCCTTAATTCATTGAAAATTTTCCAGTGTGTATTAGCTTTGACAATATGGTAAATGAGTCCTTCCTGCTTCCACGCTCAATGGATCATATTATTCTAGTTTTACTAGGATCTAACGAAGGGGGAAGGAAGTTTGTTGAATACGTTTAAATTGAAATTTATTTCTTCAATTGAACTAATCATCTCATATTGAATTGACCTTTTGTAGTCATAAAAAAATAGGATTGAATTGCAAGTCACTTGTAGTCCAAAAGTTTGATATCTGCCTATCCTAGGGTGCTATTACCATTGGAAACCATTGTAGTTCTAATGGAACAGGGAGGGGAAAATCCGAATATTAGCAATATTGGAAGTTATATAATGTGAACACATTAGTTTGCTGGTTGGTATGTGTCTTTTCCATCAGAAAGTTTATGAAAATATAAATAGGTATGCCACTTTCTTTTCCAGACTTTGCTTATTTGTTATTTTGATGTCATTGAGTTGTAAAATATCCATCTTCACCATTAATAGTGATGGTTGTAATATTACAACCGTCAAGGTGCTAAGCTGGCCCGGACATTCACGAATATTAAAAAAAAAAAACATTGACTGTTGTAATGCTACTGATATTTTCCTAATAATTAACAGTAAATGTATGATGCTACTGTAAAGGGTTTCATATTGATGATCTACTCTGTACTTTCATCTCATTTTTGGAGTCTTCAAATTTTATGTAAAGGGTATATCAAGGACTATCAAGTTCACAATCCACAAAGAGTCGGAAGGATAACAGTTGAGCTGCAAGGTAGGATCAAGGATTGCAAGGCAATCACCTACAGGCAGGACATCAAGGCAAAGGATATTGAAGCTTACAGTTTACGAACACTTCCAACACGTCAGGTGTTTTAATTATTATATTTTGCTTTCAAATCTGAATGGATTTGTCAGTCAATCTTTATTATATCTAGTTGTCCTCTTTGGTCATTTGTCTACCCATGTTGAATCAACTCAACCAATATGGTCAATATGCATGCCATTAACTTAAGATTATAGTCTGGCAAAGACAAAGTAGGATCATAATTCAAAATTTAGAGACAAATGATTAAGGCGCCATTTGGTGACCAATTTGTTTTTGTTTTTGCTTCTGTTTTTTAAAGTTAAGCCTATAAACATAACTTTCACCCAACCTTCTTCTGTTATTATTTATGTTTTACCAATAGTTTAAAAAACCAAGCCAATTTTTTAAAACAAAAATAAAAGTAGCTTTAAAAAATTGTTTTTATTTTTGGAATTTGGCTAAGAATTCAACGTAGTACTTTGGGAATACGCAAATCATTATAAGAAATGGAGAGGAACTAGACTTCATTTTCAAAAACTAAAAACAAAAAACAAAATAGTTTCCAAGGGCCTAATTTTTACTTTTTGAAGTTGAAAAGCTAAATAAACCTAACCGTCAAAAATTTATGACCACACTCTTGTTGCTAAGAAACTTGGCCAAGTAGGTCTTGTTTATTTAACCAAATTTCTCACTCTCCAACCTCTCCGCTTTGTCTGCTGTGGGGCAATGTTATGTTTTCTAATTAGCCTATTCCAAGGATAAATACTTGGAACTTGTTATTTTGTTTATATTAACCAAATATTTTACTTTCGTCTCTACAGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTGGATCATGAAGAGGCAATGAAAAGGAATGTTGGGGGTCAGGTTCTTGGATTCTTTCATTAGAGAGCCTCCTAGTTTGGCTGTTCCTTGATTTGTGAGTTTTTTTTTTTCTTTTTCAAATGTTTCCCATGTTGCATTGGGATCTTCTTATGGCTTAGTTTTCTTATTTGTGGCCTTTTGATTTTGTATTATCAAGGCAGTGCTGTACACCTCTCTTTGAGTGTTGTTGCTCCCATCATGAATGTAA ATGGGAAGGAGGATTTTGAACGACGCATTAAGATCTATTGTCAATGCTGAGAGGAGGGGAAACTCTATGGTGGAACTCAAACCCATTTCCACTGTCATGGCTTCTTTTCTTAAAGTCATGAAAGATCATGGGTATATCAAGGACTATCAAGTTCACAATCCACAAAGAGTCGGAAGGATAACAGTTGAGCTGCAAGGTAGGATCAAGGATTGCAAGGCAATCACCTACAGGCAGGACATCAAGGCAAAGGATATTGAAGCTTACAGTTTACGAACACTTCCAACACGTCAGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTGGATCATGAAGAGGCAATGAAAAGGAATGTTGGGGGTCAGGTTCTTGGATTCTTTCATTAG ATGGGAAGGAGGATTTTGAACGACGCATTAAGATCTATTGTCAATGCTGAGAGGAGGGGAAACTCTATGGTGGAACTCAAACCCATTTCCACTGTCATGGCTTCTTTTCTTAAAGTCATGAAAGATCATGGGTATATCAAGGACTATCAAGTTCACAATCCACAAAGAGTCGGAAGGATAACAGTTGAGCTGCAAGGTAGGATCAAGGATTGCAAGGCAATCACCTACAGGCAGGACATCAAGGCAAAGGATATTGAAGCTTACAGTTTACGAACACTTCCAACACGTCAGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTGGATCATGAAGAGGCAATGAAAAGGAATGTTGGGGGTCAGGTTCTTGGATTCTTTCATTAG MGRRILNDALRSIVNAERRGNSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRITVELQGRIKDCKAITYRQDIKAKDIEAYSLRTLPTRQWGYVVITTPEGILDHEEAMKRNVGGQVLGFFH*
BLAST of Csa6G041710 vs. Swiss-Prot
Match: R15A2_ARATH (40S ribosomal protein S15a-2 OS=Arabidopsis thaliana GN=RPS15AB PE=2 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 2.1e-56 Identity = 101/129 (78.29%), Postives = 118/129 (91.47%), Query Frame = 1
BLAST of Csa6G041710 vs. Swiss-Prot
Match: R15A5_ARATH (40S ribosomal protein S15a-5 OS=Arabidopsis thaliana GN=RPS15AE PE=2 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 2.7e-56 Identity = 102/129 (79.07%), Postives = 120/129 (93.02%), Query Frame = 1
BLAST of Csa6G041710 vs. Swiss-Prot
Match: RS15A_DAUCA (40S ribosomal protein S15a OS=Daucus carota GN=RPS15A PE=2 SV=3) HSP 1 Score: 138.7 bits (348), Expect = 4.7e-32 Identity = 64/125 (51.20%), Postives = 90/125 (72.00%), Query Frame = 1
BLAST of Csa6G041710 vs. Swiss-Prot
Match: RS15A_BRANA (40S ribosomal protein S15a OS=Brassica napus GN=RPS15A PE=2 SV=3) HSP 1 Score: 138.3 bits (347), Expect = 6.1e-32 Identity = 64/125 (51.20%), Postives = 90/125 (72.00%), Query Frame = 1
BLAST of Csa6G041710 vs. Swiss-Prot
Match: R15A1_ARATH (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana GN=RPS15AA PE=2 SV=2) HSP 1 Score: 138.3 bits (347), Expect = 6.1e-32 Identity = 64/125 (51.20%), Postives = 90/125 (72.00%), Query Frame = 1
BLAST of Csa6G041710 vs. TrEMBL
Match: A0A0A0KDZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G041710 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 5.3e-67 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1
BLAST of Csa6G041710 vs. TrEMBL
Match: A0A0L9VSX5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g090200 PE=3 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 1.9e-56 Identity = 104/129 (80.62%), Postives = 124/129 (96.12%), Query Frame = 1
BLAST of Csa6G041710 vs. TrEMBL
Match: A0A0S3QX35_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G035200 PE=3 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 1.9e-56 Identity = 104/129 (80.62%), Postives = 124/129 (96.12%), Query Frame = 1
BLAST of Csa6G041710 vs. TrEMBL
Match: V7CSB4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G305300g PE=3 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 3.6e-55 Identity = 103/129 (79.84%), Postives = 122/129 (94.57%), Query Frame = 1
BLAST of Csa6G041710 vs. TrEMBL
Match: A0A078F0Y0_BRANA (BnaC01g09060D protein OS=Brassica napus GN=BnaC01g09060D PE=3 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 3.6e-55 Identity = 103/129 (79.84%), Postives = 122/129 (94.57%), Query Frame = 1
BLAST of Csa6G041710 vs. TAIR10
Match: AT2G19720.1 (AT2G19720.1 ribosomal protein S15A B) HSP 1 Score: 219.5 bits (558), Expect = 1.2e-57 Identity = 101/129 (78.29%), Postives = 118/129 (91.47%), Query Frame = 1
BLAST of Csa6G041710 vs. TAIR10
Match: AT4G29430.1 (AT4G29430.1 ribosomal protein S15A E) HSP 1 Score: 219.2 bits (557), Expect = 1.5e-57 Identity = 102/129 (79.07%), Postives = 120/129 (93.02%), Query Frame = 1
BLAST of Csa6G041710 vs. TAIR10
Match: AT1G07770.1 (AT1G07770.1 ribosomal protein S15A) HSP 1 Score: 138.3 bits (347), Expect = 3.4e-33 Identity = 64/125 (51.20%), Postives = 90/125 (72.00%), Query Frame = 1
BLAST of Csa6G041710 vs. TAIR10
Match: AT5G59850.1 (AT5G59850.1 Ribosomal protein S8 family protein) HSP 1 Score: 138.3 bits (347), Expect = 3.4e-33 Identity = 64/125 (51.20%), Postives = 90/125 (72.00%), Query Frame = 1
BLAST of Csa6G041710 vs. TAIR10
Match: AT2G39590.1 (AT2G39590.1 Ribosomal protein S8 family protein) HSP 1 Score: 137.1 bits (344), Expect = 7.6e-33 Identity = 62/125 (49.60%), Postives = 90/125 (72.00%), Query Frame = 1
BLAST of Csa6G041710 vs. NCBI nr
Match: gi|449446227|ref|XP_004140873.1| (PREDICTED: 40S ribosomal protein S15a-2-like [Cucumis sativus]) HSP 1 Score: 261.5 bits (667), Expect = 7.6e-67 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1
BLAST of Csa6G041710 vs. NCBI nr
Match: gi|659089827|ref|XP_008445702.1| (PREDICTED: 40S ribosomal protein S15a-2-like [Cucumis melo]) HSP 1 Score: 251.5 bits (641), Expect = 7.9e-64 Identity = 123/129 (95.35%), Postives = 126/129 (97.67%), Query Frame = 1
BLAST of Csa6G041710 vs. NCBI nr
Match: gi|920718672|gb|KOM57869.1| (hypothetical protein LR48_Vigan11g090200 [Vigna angularis]) HSP 1 Score: 226.5 bits (576), Expect = 2.7e-56 Identity = 104/129 (80.62%), Postives = 124/129 (96.12%), Query Frame = 1
BLAST of Csa6G041710 vs. NCBI nr
Match: gi|1009133158|ref|XP_015883756.1| (PREDICTED: 40S ribosomal protein S15a-5 [Ziziphus jujuba]) HSP 1 Score: 225.7 bits (574), Expect = 4.6e-56 Identity = 105/129 (81.40%), Postives = 122/129 (94.57%), Query Frame = 1
BLAST of Csa6G041710 vs. NCBI nr
Match: gi|951004548|ref|XP_014507890.1| (PREDICTED: 40S ribosomal protein S15a-5 [Vigna radiata var. radiata]) HSP 1 Score: 224.6 bits (571), Expect = 1.0e-55 Identity = 103/129 (79.84%), Postives = 124/129 (96.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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