Csa4G637720 (gene) Cucumber (Chinese Long) v2

NameCsa4G637720
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 20789689 .. 20789936 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAGGTTGATTCTCAAGGACATCAAAGCCCCTCTCCGATTCCTTCTCCGCAATCCAGCTTCATCCGCTCCTTCTGCACAAGCCATCCAAAATCTCCTCCTCCCAATTCCAAGGCAATCTCCACCCGTAGTCCTCCCCCAGGTTTGTACTCGCGATCGGCCGCAACTATCTGGGGTTCTCAATTCTATTGTTGATGGCGGATTTAGGATCGAGGTCAGAGGGCAGCAGAAGCTGATGCATGA

mRNA sequence

ATGGCTTCCAGGTTGATTCTCAAGGACATCAAAGCCCCTCTCCGATTCCTTCTCCGCAATCCAGCTTCATCCGCTCCTTCTGCACAAGCCATCCAAAATCTCCTCCTCCCAATTCCAAGGCAATCTCCACCCGTAGTCCTCCCCCAGGATCGAGGTCAGAGGGCAGCAGAAGCTGATGCATGA

Coding sequence (CDS)

ATGGCTTCCAGGTTGATTCTCAAGGACATCAAAGCCCCTCTCCGATTCCTTCTCCGCAATCCAGCTTCATCCGCTCCTTCTGCACAAGCCATCCAAAATCTCCTCCTCCCAATTCCAAGGCAATCTCCACCCGTAGTCCTCCCCCAGGATCGAGGTCAGAGGGCAGCAGAAGCTGATGCATGA

Protein sequence

MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVVLPQDRGQRAAEADA*
BLAST of Csa4G637720 vs. TrEMBL
Match: A0A0A0L3F1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G637720 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 5.8e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1

Query: 1  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVVLPQDRGQRAAEADA 60
          MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVVLPQDRGQRAAEADA
Sbjct: 1  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVVLPQDRGQRAAEADA 60

BLAST of Csa4G637720 vs. NCBI nr
Match: gi|700199974|gb|KGN55132.1| (hypothetical protein Csa_4G637720 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 8.3e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1

Query: 1  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVVLPQDRGQRAAEADA 60
          MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVVLPQDRGQRAAEADA
Sbjct: 1  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVVLPQDRGQRAAEADA 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L3F1_CUCSA5.8e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G637720 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700199974|gb|KGN55132.1|8.3e-24100.00hypothetical protein Csa_4G637720 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU131047cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G637720.1Csa4G637720.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU131047CU131047transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G637720MELO3C016703Melon (DHL92) v3.5.1cumeB313
Csa4G637720MELO3C016703.2Melon (DHL92) v3.6.1cumedB298
Csa4G637720Bhi09G002798Wax gourdcuwgoB419
Csa4G637720CSPI04G23530Wild cucumber (PI 183967)cpicuB181
The following gene(s) are paralogous to this gene:

None