MELO3C016703 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C016703
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTransducin/WD40 repeat-like superfamily protein
Locationchr7 : 2730486 .. 2730872 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAGGTTGATTCTCAAGGACATCAAAACCCCTCTCCGATTCCTTCTTCGCAATCCAGCTTCATCCGCTCCTTCTGCACAAGCCATCCAAAATCTCCTCCTCCCAATTCCAAGGCAATATCCATCCGGATTCCTCGGCCAGGTTTGTACGGGCGGTCGACCGCAACTATCTGGGGTTTTTAATTCTAGTGTTGATGGCGGCTTTAGGATCGAGGTCAGAGGGAAGCAGGAGCTGGCGAATTACGACGACGACAATATGGAGATCGATAGTGATTTCGAGAAGGAGTGTCCCGATGGGTTCGACAGTGATGACGACGATTTTTTTGACACCGACGAAATGGAGCCTCAAGATGATGATGATGATGAGGAGGAGGAGGAGTAG

mRNA sequence

ATGGCTTCCAGGTTGATTCTCAAGGACATCAAAACCCCTCTCCGATTCCTTCTTCGCAATCCAGCTTCATCCGCTCCTTCTGCACAAGCCATCCAAAATCTCCTCCTCCCAATTCCAAGGCAATATCCATCCGGATTCCTCGGCCAGGTTTGTACGGGCGGTCGACCGCAACTATCTGGGGTTTTTAATTCTAGTGTTGATGGCGGCTTTAGGATCGAGGTCAGAGGGAAGCAGGAGCTGGCGAATTACGACGACGACAATATGGAGATCGATAGTGATTTCGAGAAGGAGTGTCCCGATGGGTTCGACAGTGATGACGACGATTTTTTTGACACCGACGAAATGGAGCCTCAAGATGATGATGATGATGAGGAGGAGGAGGAGTAG

Coding sequence (CDS)

ATGGCTTCCAGGTTGATTCTCAAGGACATCAAAACCCCTCTCCGATTCCTTCTTCGCAATCCAGCTTCATCCGCTCCTTCTGCACAAGCCATCCAAAATCTCCTCCTCCCAATTCCAAGGCAATATCCATCCGGATTCCTCGGCCAGGTTTGTACGGGCGGTCGACCGCAACTATCTGGGGTTTTTAATTCTAGTGTTGATGGCGGCTTTAGGATCGAGGTCAGAGGGAAGCAGGAGCTGGCGAATTACGACGACGACAATATGGAGATCGATAGTGATTTCGAGAAGGAGTGTCCCGATGGGTTCGACAGTGATGACGACGATTTTTTTGACACCGACGAAATGGAGCCTCAAGATGATGATGATGATGAGGAGGAGGAGGAGTAG

Protein sequence

MASRLILKDIKTPLRFLLRNPASSAPSAQAIQNLLLPIPRQYPSGFLGQVCTGGRPQLSGVFNSSVDGGFRIEVRGKQELANYDDDNMEIDSDFEKECPDGFDSDDDDFFDTDEMEPQDDDDDEEEEE*
Homology
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BLAST of MELO3C016703 vs. TrEMBL
Match: A0A0A0L3F1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G637720 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.5e-13
Identity = 43/49 (87.76%), Postives = 43/49 (87.76%), Query Frame = 1 

Query: 1  MASRLILKDIKTPLRFLLRNPASSAPSAQAIQNLLLPIPRQYPSGFLGQ 50
          MASRLILKDIK PLRFLLRNPASSAPSAQAIQNLLLPIPRQ P   L Q
Sbjct: 1  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVVLPQ 49

[Close]
BLAST of MELO3C016703 vs. NCBI nr
Match: gi|700199974|gb|KGN55132.1| (hypothetical protein Csa_4G637720 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-12
Identity = 43/49 (87.76%), Postives = 43/49 (87.76%), Query Frame = 1 

Query: 1  MASRLILKDIKTPLRFLLRNPASSAPSAQAIQNLLLPIPRQYPSGFLGQ 50
          MASRLILKDIK PLRFLLRNPASSAPSAQAIQNLLLPIPRQ P   L Q
Sbjct: 1  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVVLPQ 49

The following BLAST results are available for this feature:
BLAST of MELO3C016703 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3F1_CUCSA7.5e-1387.76Uncharacterized protein OS=Cucumis sativus GN=Csa_4G637720 PE=4 SV=1[more]
BLAST of MELO3C016703 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199974|gb|KGN55132.1|1.1e-1287.76hypothetical protein Csa_4G637720 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU45910melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016703T1MELO3C016703T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU45910MU45910transcribed_cluster