Csa4G127000.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa4G127000.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 7759140 .. 7759395 (+)
Sequence length156
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATTGTTCACTGTGCATTTCCAACAATTCTCGGAAGTTACCGTCGTCGTACTACGGCGGTGGGTACAGCGAAATAACCAAAAAACGAAAGGGGTGAGCCCCGGGGGGGGACTGTTTGCTACGTGTCACCACCGCAACTCCATTTTGATTTGCACTGTTCAAGAAATGAAAGCACTTCCCAATAACCTGCGGGTTTACAGTTACGCATCTGAGGATGAAGAGCACTTTTCTTCTCATGACGTGTCGCTCTAG

mRNA sequence

ATGGGGATTGTTCACTGTGCATTTCCAACAATTCTCGGAAGTTACCGTCGTCGTACTACGGCGGTGGAAATGAAAGCACTTCCCAATAACCTGCGGGTTTACAGTTACGCATCTGAGGATGAAGAGCACTTTTCTTCTCATGACGTGTCGCTCTAG

Coding sequence (CDS)

ATGGGGATTGTTCACTGTGCATTTCCAACAATTCTCGGAAGTTACCGTCGTCGTACTACGGCGGTGGAAATGAAAGCACTTCCCAATAACCTGCGGGTTTACAGTTACGCATCTGAGGATGAAGAGCACTTTTCTTCTCATGACGTGTCGCTCTAG

Protein sequence

MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL*
Homology
[Close]
BLAST of Csa4G127000.1 vs. TrEMBL
Match: A0A0A0L0W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G127000 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 6.7e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1 

Query: 1  MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL 52
          MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL
Sbjct: 1  MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL 51

[Close]
BLAST of Csa4G127000.1 vs. NCBI nr
Match: gi|700198623|gb|KGN53781.1| (hypothetical protein Csa_4G127000 [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 9.6e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1 

Query: 1  MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL 52
          MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL
Sbjct: 1  MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL 51

The following BLAST results are available for this feature:
BLAST of Csa4G127000.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0W2_CUCSA6.7e-21100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G127000 PE=4 SV=1[more]
BLAST of Csa4G127000.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198623|gb|KGN53781.1|9.6e-21100.00hypothetical protein Csa_4G127000 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa4G127000Csa4G127000gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa4G127000.1Csa4G127000.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa4G127000.1.cds1Csa4G127000.1.cds1CDS
Csa4G127000.1.cds2Csa4G127000.1.cds2CDS