Csa4G127000 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G127000
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 7759140 .. 7759395 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATTGTTCACTGTGCATTTCCAACAATTCTCGGAAGTTACCGTCGTCGTACTACGGCGGTGGGTACAGCGAAATAACCAAAAAACGAAAGGGGTGAGCCCCGGGGGGGGACTGTTTGCTACGTGTCACCACCGCAACTCCATTTTGATTTGCACTGTTCAAGAAATGAAAGCACTTCCCAATAACCTGCGGGTTTACAGTTACGCATCTGAGGATGAAGAGCACTTTTCTTCTCATGACGTGTCGCTCTAG

mRNA sequence

ATGGGGATTGTTCACTGTGCATTTCCAACAATTCTCGGAAGTTACCGTCGTCGTACTACGGCGGTGGAAATGAAAGCACTTCCCAATAACCTGCGGGTTTACAGTTACGCATCTGAGGATGAAGAGCACTTTTCTTCTCATGACGTGTCGCTCTAG

Coding sequence (CDS)

ATGGGGATTGTTCACTGTGCATTTCCAACAATTCTCGGAAGTTACCGTCGTCGTACTACGGCGGTGGAAATGAAAGCACTTCCCAATAACCTGCGGGTTTACAGTTACGCATCTGAGGATGAAGAGCACTTTTCTTCTCATGACGTGTCGCTCTAG

Protein sequence

MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL*
Homology
[Close]
BLAST of Csa4G127000 vs. TrEMBL
Match: A0A0A0L0W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G127000 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 6.7e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1 

Query: 1  MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL 52
          MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL
Sbjct: 1  MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL 51

[Close]
BLAST of Csa4G127000 vs. NCBI nr
Match: gi|700198623|gb|KGN53781.1| (hypothetical protein Csa_4G127000 [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 9.6e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1 

Query: 1  MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL 52
          MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL
Sbjct: 1  MGIVHCAFPTILGSYRRRTTAVEMKALPNNLRVYSYASEDEEHFSSHDVSL 51

The following BLAST results are available for this feature:
BLAST of Csa4G127000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0W2_CUCSA6.7e-21100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G127000 PE=4 SV=1[more]
BLAST of Csa4G127000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198623|gb|KGN53781.1|9.6e-21100.00hypothetical protein Csa_4G127000 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G127000.1Csa4G127000.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G127000Cucumber (Gy14) v2cgybcuB029
Csa4G127000Cucumber (Gy14) v2cgybcuB165
Csa4G127000Melon (DHL92) v3.6.1cumedB264
Csa4G127000Melon (DHL92) v3.6.1cumedB273
Csa4G127000Melon (DHL92) v3.6.1cumedB300
Csa4G127000Silver-seed gourdcarcuB0721
Csa4G127000Watermelon (97103) v2cuwmbB295
Csa4G127000Watermelon (97103) v2cuwmbB314
Csa4G127000Watermelon (97103) v2cuwmbB324
Csa4G127000Wax gourdcuwgoB369
Csa4G127000Wax gourdcuwgoB413
Csa4G127000Wax gourdcuwgoB427
Csa4G127000Cucumber (Chinese Long) v2cucuB027
Csa4G127000Cucumber (Gy14) v1cgycuB141
Csa4G127000Cucumber (Gy14) v1cgycuB266
Csa4G127000Cucurbita maxima (Rimu)cmacuB262
Csa4G127000Cucurbita maxima (Rimu)cmacuB476
Csa4G127000Cucurbita moschata (Rifu)cmocuB247
Csa4G127000Cucurbita moschata (Rifu)cmocuB465
Csa4G127000Melon (DHL92) v3.5.1cumeB270
Csa4G127000Melon (DHL92) v3.5.1cumeB279
Csa4G127000Melon (DHL92) v3.5.1cumeB288
Csa4G127000Melon (DHL92) v3.5.1cumeB316
Csa4G127000Watermelon (Charleston Gray)cuwcgB298
Csa4G127000Watermelon (Charleston Gray)cuwcgB327
Csa4G127000Watermelon (97103) v1cuwmB306
Csa4G127000Watermelon (97103) v1cuwmB337
Csa4G127000Watermelon (97103) v1cuwmB357
Csa4G127000Cucurbita pepo (Zucchini)cpecuB567
Csa4G127000Cucurbita pepo (Zucchini)cpecuB617
Csa4G127000Bottle gourd (USVL1VR-Ls)culsiB272
Csa4G127000Bottle gourd (USVL1VR-Ls)culsiB302
Csa4G127000Bottle gourd (USVL1VR-Ls)culsiB313