Csa4G064620 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G064620
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 5235633 .. 5236247 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAAGTTTGTTGACACAACTTGGTAAGTATACCTCCAGTTCTCGTATGTCTTCTGGTTTTGAAGCTGGTCACTGTGCTGATTATCCTGGTAGTTCTCAGTTTGTTTCGCCTCGTTTGAATTCTAGTTCATCTCAGTCTTCTCTTAAGGATGGTTCTAGAGTTCCTGTTACAGAAATGAGGTTTATTTAGATCATTAATATTAACTCCGAGTCTTTGGATCATGATAATGTTGCTTTATATGAGTTGTTGCGCAGTCTGCATCATTCCGCTGCTAGTTCTGCTATATCTTCTCATGTGAATAAAGTGCCTATACCCTCTAAAGGGCCTAGGGCTGGGGCTCCGTTTGCGGGAGATGATGTGATTGATGATTTGTTTCCTGATTCTCTACTTCAGTCACATGGATTGTTATTATCTTTCGATTTGGCAACTCAGTTGGTCCAATTGTTGTTTGAAGAATCACGTTCTTTGAGTGTTTCCATTCAAGACTTGCAAGGGGTAATCTCTAGTCTAACTAGTCGTCATGTTGCAGTTGATTCTGTGTTTCATGTTTTACATTCATTAATTGTTGATTCTCAAAAGCGACCTTCTGACTCTTCTAAACATGGTTCTTAG

mRNA sequence

ATGATAAGTTTGTTGACACAACTTGGTAAGTATACCTCCAGTTCTCGTATGTCTTCTGGTTTTGAAGCTGGTCACTGTGCTGATTATCCTGGTAGTTCTCAGTTTGTTTCGCCTCGTTTGAATTCTAGTTCATCTCAGTCTTCTCTTAAGGATGGTTCTAGAGTTCCTGTTACAGAAATGAGTCTGCATCATTCCGCTGCTAGTTCTGCTATATCTTCTCATGTGAATAAAGTGCCTATACCCTCTAAAGGGCCTAGGGCTGGGGCTCCGTTTGCGGGAGATGATGTGATTGATGATTTGTTTCCTGATTCTCTACTTCAGTCACATGGATTGTTATTATCTTTCGATTTGGCAACTCAGTTGGTCCAATTGTTGTTTGAAGAATCACGTTCTTTGAGTGTTTCCATTCAAGACTTGCAAGGGGTAATCTCTAGTCTAACTAGTCGTCATGTTGCAGTTGATTCTGTGTTTCATGTTTTACATTCATTAATTGTTGATTCTCAAAAGCGACCTTCTGACTCTTCTAAACATGGTTCTTAG

Coding sequence (CDS)

ATGATAAGTTTGTTGACACAACTTGGTAAGTATACCTCCAGTTCTCGTATGTCTTCTGGTTTTGAAGCTGGTCACTGTGCTGATTATCCTGGTAGTTCTCAGTTTGTTTCGCCTCGTTTGAATTCTAGTTCATCTCAGTCTTCTCTTAAGGATGGTTCTAGAGTTCCTGTTACAGAAATGAGTCTGCATCATTCCGCTGCTAGTTCTGCTATATCTTCTCATGTGAATAAAGTGCCTATACCCTCTAAAGGGCCTAGGGCTGGGGCTCCGTTTGCGGGAGATGATGTGATTGATGATTTGTTTCCTGATTCTCTACTTCAGTCACATGGATTGTTATTATCTTTCGATTTGGCAACTCAGTTGGTCCAATTGTTGTTTGAAGAATCACGTTCTTTGAGTGTTTCCATTCAAGACTTGCAAGGGGTAATCTCTAGTCTAACTAGTCGTCATGTTGCAGTTGATTCTGTGTTTCATGTTTTACATTCATTAATTGTTGATTCTCAAAAGCGACCTTCTGACTCTTCTAAACATGGTTCTTAG

Protein sequence

MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEMSLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS*
Homology
[Close]
BLAST of Csa4G064620 vs. TrEMBL
Match: A0A0A0KVC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G064620 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.7e-92
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1 

Query: 1   MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEM 60
           MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEM
Sbjct: 1   MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEM 60

Query: 61  SLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQ 120
           SLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQ
Sbjct: 61  SLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQ 120

Query: 121 LVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS 180
           LVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS
Sbjct: 121 LVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS 179

[Close]
BLAST of Csa4G064620 vs. NCBI nr
Match: gi|700198372|gb|KGN53530.1| (hypothetical protein Csa_4G064620 [Cucumis sativus])

HSP 1 Score: 346.7 bits (888), Expect = 2.5e-92
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1 

Query: 1   MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEM 60
           MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEM
Sbjct: 1   MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEM 60

Query: 61  SLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQ 120
           SLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQ
Sbjct: 61  SLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQ 120

Query: 121 LVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS 180
           LVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS
Sbjct: 121 LVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS 179

The following BLAST results are available for this feature:
BLAST of Csa4G064620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVC9_CUCSA1.7e-92100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G064620 PE=4 SV=1[more]
BLAST of Csa4G064620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198372|gb|KGN53530.1|2.5e-92100.00hypothetical protein Csa_4G064620 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G064620.1Csa4G064620.1mRNA